Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:32:09 (28138): wrapper (7.7.26015): starting
06:32:09 (28138): wrapper: running run_atlas (--nthreads 8)
[2025-03-28 06:32:09] Arguments: --nthreads 8
[2025-03-28 06:32:09] Threads: 8
[2025-03-28 06:32:09] Checking for CVMFS
[2025-03-28 06:32:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-28 06:32:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-28 06:32:12] Running cvmfs_config stat atlas.cern.ch
[2025-03-28 06:32:13] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/patatrack.cern.ch: Transport endpoint is not connected
[2025-03-28 06:32:13] 
[2025-03-28 06:32:13] CVMFS is ok
[2025-03-28 06:32:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-28 06:32:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-28 06:32:13] Further information can be found at the LHC@home message board.
[2025-03-28 06:32:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-28 06:32:13] Checking for apptainer binary...
[2025-03-28 06:32:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-28 06:32:13] Running /usr/bin/apptainer --version
[2025-03-28 06:32:13] apptainer version 1.3.2-1.el7
[2025-03-28 06:32:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-28 06:32:52] c-211-10.aglt2.org
[2025-03-28 06:32:52] apptainer works
[2025-03-28 06:32:52] Set ATHENA_PROC_NUMBER=8
[2025-03-28 06:32:52] Set ATHENA_CORE_NUMBER=8
[2025-03-28 06:32:52] Starting ATLAS job with PandaID=6563974440
[2025-03-28 06:32:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-29 11:46:55]  *** The last 200 lines of the pilot log: ***
[2025-03-29 11:46:55] 2025-03-29 15:46:25,201 | INFO     | monitor loop #4486: job 0:6563974440 is in state 'finished'
[2025-03-29 11:46:55] 2025-03-29 15:46:25,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-03-29 11:46:55] 2025-03-29 15:46:27,739 | INFO     | monitor loop #4487: job 0:6563974440 is in state 'finished'
[2025-03-29 11:46:55] 2025-03-29 15:46:27,740 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-03-29 11:46:55] 2025-03-29 15:46:29,970 | INFO     | PID=5869 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-03-29 11:46:55] 2025-03-29 15:46:29,970 | INFO     | .. there are 42 such processes running
[2025-03-29 11:46:55] 2025-03-29 15:46:30,290 | INFO     | monitor loop #4488: job 0:6563974440 is in state 'finished'
[2025-03-29 11:46:55] 2025-03-29 15:46:30,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-03-29 11:46:55] 2025-03-29 15:46:32,821 | INFO     | monitor loop #4489: job 0:6563974440 is in state 'finished'
[2025-03-29 11:46:55] 2025-03-29 15:46:32,822 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-03-29 11:46:55] 2025-03-29 15:46:35,327 | INFO     | monitor loop #4490: job 0:6563974440 is in state 'finished'
[2025-03-29 11:46:55] 2025-03-29 15:46:35,353 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-03-29 11:46:55] 2025-03-29 15:46:37,858 | INFO     | monitor loop #4491: job 0:6563974440 is in state 'finished'
[2025-03-29 11:46:55] 2025-03-29 15:46:37,859 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-03-29 11:46:55] 2025-03-29 15:46:38,721 | INFO     | CPU arch script returned: x86-64-v3
[2025-03-29 11:46:55] 2025-03-29 15:46:38,722 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6563974440/memory_monitor_summary.json (trf name=prmon)
[2025-03-29 11:46:55] 2025-03-29 15:46:38,723 | INFO     | extracted standard info from prmon json
[2025-03-29 11:46:55] 2025-03-29 15:46:38,723 | INFO     | extracted standard memory fields from prmon json
[2025-03-29 11:46:55] 2025-03-29 15:46:38,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-03-29 11:46:55] 2025-03-29 15:46:38,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-03-29 11:46:55] 2025-03-29 15:46:38,724 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-03-29 11:46:55] 2025-03-29 15:46:38,763 | INFO     | fitting pss+swap vs Time
[2025-03-29 11:46:55] 2025-03-29 15:46:38,766 | INFO     | model: linear, x: [1743158641.0, 1743158702.0, 1743158763.0, 1743158824.0, 1743158885.0, 1743158946.0, 1743159008.0, 1743159068.0, 1743159129.0, 1743159190.0, 1743
[2025-03-29 11:46:55] 2025-03-29 15:46:38,769 | INFO     | sum of square deviations: 1561379109435.6204
[2025-03-29 11:46:55] 2025-03-29 15:46:38,862 | INFO     | sum of deviations: 4669572923016.664
[2025-03-29 11:46:55] 2025-03-29 15:46:38,863 | INFO     | mean x: 1743210888.2882147
[2025-03-29 11:46:55] 2025-03-29 15:46:38,865 | INFO     | mean y: 2503547.11201867
[2025-03-29 11:46:55] 2025-03-29 15:46:38,865 | INFO     | -- intersect: -5210868601.821622
[2025-03-29 11:46:55] 2025-03-29 15:46:38,865 | INFO     | intersect: -5210868601.821622
[2025-03-29 11:46:55] 2025-03-29 15:46:38,869 | INFO     | chi2: 21.07605880730495
[2025-03-29 11:46:55] 2025-03-29 15:46:38,872 | INFO     | model: linear, x: [1743158641.0, 1743158702.0, 1743158763.0, 1743158824.0, 1743158885.0, 1743158946.0, 1743159008.0, 1743159068.0, 1743159129.0, 1743159190.0, 1743
[2025-03-29 11:46:55] 2025-03-29 15:46:38,873 | INFO     | sum of square deviations: 1547754817413.5874
[2025-03-29 11:46:55] 2025-03-29 15:46:38,973 | INFO     | sum of deviations: 5009255451242.931
[2025-03-29 11:46:55] 2025-03-29 15:46:38,974 | INFO     | mean x: 1743210735.7899356
[2025-03-29 11:46:55] 2025-03-29 15:46:38,974 | INFO     | mean y: 2507344.565242832
[2025-03-29 11:46:55] 2025-03-29 15:46:38,974 | INFO     | -- intersect: -5639334491.542278
[2025-03-29 11:46:55] 2025-03-29 15:46:38,978 | INFO     | intersect: -5639334491.542278
[2025-03-29 11:46:55] 2025-03-29 15:46:38,981 | INFO     | chi2: 18.756075099531312
[2025-03-29 11:46:55] 2025-03-29 15:46:38,982 | INFO     | current chi2=18.756075099531312 (change=11.007673346259276 %)
[2025-03-29 11:46:55] 2025-03-29 15:46:38,982 | INFO     | right removable region: 1708
[2025-03-29 11:46:55] 2025-03-29 15:46:38,988 | INFO     | model: linear, x: [1743158946.0, 1743159008.0, 1743159068.0, 1743159129.0, 1743159190.0, 1743159251.0, 1743159312.0, 1743159374.0, 1743159434.0, 1743159496.0, 1743
[2025-03-29 11:46:55] 2025-03-29 15:46:38,993 | INFO     | sum of square deviations: 1547754097735.007
[2025-03-29 11:46:55] 2025-03-29 15:46:39,170 | INFO     | sum of deviations: 4034528402776.327
[2025-03-29 11:46:55] 2025-03-29 15:46:39,171 | INFO     | mean x: 1743211040.7905207
[2025-03-29 11:46:55] 2025-03-29 15:46:39,171 | INFO     | mean y: 2510654.699239321
[2025-03-29 11:46:55] 2025-03-29 15:46:39,171 | INFO     | -- intersect: -4541515083.23602
[2025-03-29 11:46:55] 2025-03-29 15:46:39,171 | INFO     | intersect: -4541515083.23602
[2025-03-29 11:46:55] 2025-03-29 15:46:39,174 | INFO     | chi2: 16.10099192964867
[2025-03-29 11:46:55] 2025-03-29 15:46:39,174 | INFO     | current chi2=16.10099192964867 (change=23.60529984824261 %)
[2025-03-29 11:46:55] 2025-03-29 15:46:39,174 | INFO     | left removable region: 10
[2025-03-29 11:46:55] 2025-03-29 15:46:39,176 | INFO     | model: linear, x: [1743159251.0, 1743159312.0, 1743159374.0, 1743159434.0, 1743159496.0, 1743159556.0, 1743159617.0, 1743159678.0, 1743159739.0, 1743159800.0, 1743
[2025-03-29 11:46:55] 2025-03-29 15:46:39,177 | INFO     | sum of square deviations: 1518059537916.76
[2025-03-29 11:46:55] 2025-03-29 15:46:39,301 | INFO     | sum of deviations: 3813597179054.7812
[2025-03-29 11:46:55] 2025-03-29 15:46:39,301 | INFO     | mean x: 1743211010.294464
[2025-03-29 11:46:55] 2025-03-29 15:46:39,301 | INFO     | mean y: 2520765.582449941
[2025-03-29 11:46:55] 2025-03-29 15:46:39,301 | INFO     | -- intersect: -4376691264.848948
[2025-03-29 11:46:55] 2025-03-29 15:46:39,302 | INFO     | intersect: -4376691264.848948
[2025-03-29 11:46:55] 2025-03-29 15:46:39,304 | INFO     | chi2: 9.98684595262853
[2025-03-29 11:46:55] 2025-03-29 15:46:39,304 | INFO     | -- intersect: -4376691264.848948
[2025-03-29 11:46:55] 2025-03-29 15:46:39,304 | INFO     | current memory leak: 2.51 B/s (using 1698 data points, chi2=9.99)
[2025-03-29 11:46:55] 2025-03-29 15:46:39,306 | INFO     | ..............................
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | . Timing measurements:
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | . get job = 1 s
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | . initial setup = 16 s
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | . payload setup = 144 s
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | . stage-in = 1 s
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | . payload execution = 104647 s
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | . stage-out = 8 s
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | . log creation = 3 s
[2025-03-29 11:46:55] 2025-03-29 15:46:39,307 | INFO     | ..............................
[2025-03-29 11:46:55] 2025-03-29 15:46:39,419 | INFO     | 
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | job summary report
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | --------------------------------------------------
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | PanDA job id: 6563974440
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | task id: 43634914
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | errors: (none)
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | pilot state: finished 
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | transexitcode: 0
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | exeerrorcode: 0
[2025-03-29 11:46:55] 2025-03-29 15:46:39,420 | INFO     | exeerrordiag: 
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | exitcode: 0
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | exitmsg: OK
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | cpuconsumptiontime: 123592 s
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | nevents: 400
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | neventsw: 0
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | pid: 19145
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | pgrp: 19145
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | corecount: 8
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | event service: False
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | sizes: {0: 2410192, 1: 2410877, 3: 2410877, 4: 2411104, 5: 2411104, 16: 2411160, 27: 2411316, 39: 2411344, 51: 2411372, 63: 2411400, 74: 2411428, 83: 2411942, 85: 
[2025-03-29 11:46:55] 2025-03-29 15:46:39,421 | INFO     | --------------------------------------------------
[2025-03-29 11:46:55] 2025-03-29 15:46:39,422 | INFO     | 
[2025-03-29 11:46:55] 2025-03-29 15:46:39,422 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-03-29 11:46:55] 2025-03-29 15:46:39,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-29 11:46:55] 2025-03-29 15:46:39,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-29 11:46:55] 2025-03-29 15:46:39,453 | INFO     | job 6563974440 has completed (purged errors)
[2025-03-29 11:46:55] 2025-03-29 15:46:39,454 | INFO     | overall cleanup function is called
[2025-03-29 11:46:55] 2025-03-29 15:46:40,462 | INFO     | --- collectZombieJob: --- 10, [19145]
[2025-03-29 11:46:55] 2025-03-29 15:46:40,463 | INFO     | zombie collector waiting for pid 19145
[2025-03-29 11:46:55] 2025-03-29 15:46:40,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-29 11:46:55] 2025-03-29 15:46:40,481 | INFO     | collected zombie processes
[2025-03-29 11:46:55] 2025-03-29 15:46:40,481 | INFO     | will attempt to kill all subprocesses of pid=19145
[2025-03-29 11:46:55] 2025-03-29 15:46:41,021 | INFO     | process IDs to be killed: [19145] (in reverse order)
[2025-03-29 11:46:55] 2025-03-29 15:46:41,203 | WARNING  | found no corresponding commands to process id(s)
[2025-03-29 11:46:55] 2025-03-29 15:46:41,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-29 11:46:55] 2025-03-29 15:46:41,223 | INFO     | did not find any defunct processes belonging to 19145
[2025-03-29 11:46:55] 2025-03-29 15:46:41,243 | INFO     | did not find any defunct processes belonging to 19145
[2025-03-29 11:46:55] 2025-03-29 15:46:41,244 | INFO     | ready for new job
[2025-03-29 11:46:55] 2025-03-29 15:46:41,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-29 11:46:55] 2025-03-29 15:46:41,255 | INFO     | ***************************************
[2025-03-29 11:46:55] 2025-03-29 15:46:41,256 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-03-29 11:46:55] 2025-03-29 15:46:41,256 | INFO     | ***************************************
[2025-03-29 11:46:55] 2025-03-29 15:46:41,256 | INFO     | 
[2025-03-29 11:46:55] 2025-03-29 15:46:41,259 | INFO     | architecture information:
[2025-03-29 11:46:55] 2025-03-29 15:46:41,259 | INFO     | executing command: cat /etc/os-release
[2025-03-29 11:46:55] 2025-03-29 15:46:41,281 | INFO     | cat /etc/os-release:
[2025-03-29 11:46:55] NAME="CentOS Linux"
[2025-03-29 11:46:55] VERSION="7 (Core)"
[2025-03-29 11:46:55] ID="centos"
[2025-03-29 11:46:55] ID_LIKE="rhel fedora"
[2025-03-29 11:46:55] VERSION_ID="7"
[2025-03-29 11:46:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-29 11:46:55] ANSI_COLOR="0;31"
[2025-03-29 11:46:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-29 11:46:55] HOME_URL="https://www.centos.org/"
[2025-03-29 11:46:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-29 11:46:55] 
[2025-03-29 11:46:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-29 11:46:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-29 11:46:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-29 11:46:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-29 11:46:55] 
[2025-03-29 11:46:55] 2025-03-29 15:46:41,282 | INFO     | ***************************************
[2025-03-29 11:46:55] 2025-03-29 15:46:41,785 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-03-29 11:46:55] 2025-03-29 15:46:41,829 | INFO     | sufficient remaining disk space (57285804032 B)
[2025-03-29 11:46:55] 2025-03-29 15:46:41,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-29 11:46:55] 2025-03-29 15:46:41,830 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-29 11:46:55] 2025-03-29 15:46:41,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-29 11:46:55] 2025-03-29 15:46:41,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-29 11:46:55] 2025-03-29 15:46:41,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-29 11:46:55] 2025-03-29 15:46:41,831 | INFO     | aborting loop
[2025-03-29 11:46:55] 2025-03-29 15:46:42,033 | INFO     | found 0 job(s) in 20 queues
[2025-03-29 11:46:55] 2025-03-29 15:46:42,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-29 11:46:55] 2025-03-29 15:46:42,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-29 11:46:55] 2025-03-29 15:46:42,107 | INFO     | all job control threads have been joined
[2025-03-29 11:46:55] 2025-03-29 15:46:42,542 | INFO     | all payload control threads have been joined
[2025-03-29 11:46:55] 2025-03-29 15:46:42,835 | INFO     | [job] retrieve thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:42,836 | INFO     | [job] job monitor thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:42,878 | INFO     | all data control threads have been joined
[2025-03-29 11:46:55] 2025-03-29 15:46:43,112 | INFO     | [job] create_data_payload thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:43,113 | INFO     | [job] control thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:43,118 | INFO     | [payload] validate_pre thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:43,374 | INFO     | [payload] failed_post thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:43,548 | INFO     | [payload] control thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:43,698 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:43,836 | INFO     | [data] copytool_out thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:43,884 | INFO     | [data] control thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:44,016 | INFO     | [payload] validate_post thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:44,141 | INFO     | [data] copytool_in thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:44,230 | INFO     | [payload] execute_payloads thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:44,338 | INFO     | [job] validate thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:44,434 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-29 11:46:55] 2025-03-29 15:46:45,440 | INFO     | [job] queue monitor thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:45,839 | INFO     | [data] queue_monitor thread has finished
[2025-03-29 11:46:55] 2025-03-29 15:46:46,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702847104832)>', '<ExcThread(monitor, started 140702541387520)>']
[2025-03-29 11:46:55] 2025-03-29 15:46:47,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-29 11:46:55] 2025-03-29 15:46:47,062 | INFO     | [monitor] control thread has ended
[2025-03-29 11:46:55] 2025-03-29 15:46:51,901 | INFO     | all workflow threads have been joined
[2025-03-29 11:46:55] 2025-03-29 15:46:51,902 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-29 11:46:55] 2025-03-29 15:46:51,902 | INFO     | traces error code: 0
[2025-03-29 11:46:55] 2025-03-29 15:46:51,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-29 11:46:55] 2025-03-29 15:46:53,280 [wrapper] ==== pilot stdout END ====
[2025-03-29 11:46:55] 2025-03-29 15:46:53,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-29 11:46:55] 2025-03-29 15:46:53,333 [wrapper] pilotpid: 5869
[2025-03-29 11:46:55] 2025-03-29 15:46:53,352 [wrapper] Pilot exit status: 0
[2025-03-29 11:46:55] 2025-03-29 15:46:53,483 [wrapper] pandaids: 6563974440
[2025-03-29 11:46:55] 2025-03-29 15:46:53,923 [wrapper] cleanup supervisor_pilot  7999 5870
[2025-03-29 11:46:55] 2025-03-29 15:46:53,949 [wrapper] Test setup, not cleaning
[2025-03-29 11:46:55] 2025-03-29 15:46:53,993 [wrapper] apfmon messages muted
[2025-03-29 11:46:55] 2025-03-29 15:46:54,038 [wrapper] ==== wrapper stdout END ====
[2025-03-29 11:46:55] 2025-03-29 15:46:54,091 [wrapper] ==== wrapper stderr END ====
[2025-03-29 11:46:55]  *** Error codes and diagnostics ***
[2025-03-29 11:46:55]     "exeErrorCode": 0,
[2025-03-29 11:46:55]     "exeErrorDiag": "",
[2025-03-29 11:46:55]     "pilotErrorCode": 0,
[2025-03-29 11:46:55]     "pilotErrorDiag": "",
[2025-03-29 11:46:55]  *** Listing of results directory ***
[2025-03-29 11:46:55] total 726536
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas    494584 Mar 20 09:28 pilot3.tar.gz
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas      5112 Mar 20 09:37 queuedata.json
[2025-03-29 11:46:55] -rwx------ 1 boincer umatlas     37212 Mar 20 09:38 runpilot2-wrapper.sh
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas       100 Mar 28 06:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-29 11:46:55] -rwxr-xr-x 1 boincer umatlas      7986 Mar 28 06:32 run_atlas
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas       105 Mar 28 06:32 job.xml
[2025-03-29 11:46:55] -rw-r--r-- 2 boincer umatlas 362208679 Mar 28 06:32 EVNT.43634912._000417.pool.root.1
[2025-03-29 11:46:55] -rw-r--r-- 2 boincer umatlas     17571 Mar 28 06:32 start_atlas.sh
[2025-03-29 11:46:55] drwxrwx--x 2 boincer umatlas      4096 Mar 28 06:32 shared
[2025-03-29 11:46:55] -rw-r--r-- 2 boincer umatlas    507278 Mar 28 06:32 input.tar.gz
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas         0 Mar 28 06:32 boinc_lockfile
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas      2620 Mar 28 06:32 pandaJob.out
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas       424 Mar 28 06:33 setup.sh.local
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas    994543 Mar 28 06:36 agis_schedconf.cvmfs.json
[2025-03-29 11:46:55] drwx------ 4 boincer umatlas      4096 Mar 28 06:36 pilot3
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas      6050 Mar 29 11:38 init_data.xml
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas 331120846 Mar 29 11:42 HITS.43634914._010408.pool.root.1
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas       534 Mar 29 11:43 boinc_task_state.xml
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas      1066 Mar 29 11:45 memory_monitor_summary.json
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas   1599134 Mar 29 11:45 agis_ddmendpoints.agis.ALL.json
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas   2843073 Mar 29 11:45 log.43634914._010408.job.log.tgz.1
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas        95 Mar 29 11:46 pilot_heartbeat.json
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas      7780 Mar 29 11:46 heartbeat.json
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas      4219 Mar 29 11:46 pilotlog.txt
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas  20554550 Mar 29 11:46 log.43634914._010408.job.log.1
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas       357 Mar 29 11:46 output.list
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas      8192 Mar 29 11:46 boinc_mmap_file
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas       620 Mar 29 11:46 runtime_log
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas        29 Mar 29 11:46 wrapper_checkpoint.txt
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas  23418880 Mar 29 11:46 result.tar.gz
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas       669 Mar 29 11:46 XrDMDmrHVF7n9Rq4apOajLDm4fhM0noT9bVoFjIUDms5mKDmuidirm.diag
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas     11016 Mar 29 11:46 runtime_log.err
[2025-03-29 11:46:55] -rw-r--r-- 1 boincer umatlas     21717 Mar 29 11:46 stderr.txt
[2025-03-29 11:46:55] HITS file was successfully produced:
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas 331120846 Mar 29 11:42 shared/HITS.pool.root.1
[2025-03-29 11:46:55]  *** Contents of shared directory: ***
[2025-03-29 11:46:55] total 700480
[2025-03-29 11:46:55] -rw-r--r-- 2 boincer umatlas 362208679 Mar 28 06:32 ATLAS.root_0
[2025-03-29 11:46:55] -rw-r--r-- 2 boincer umatlas     17571 Mar 28 06:32 start_atlas.sh
[2025-03-29 11:46:55] -rw-r--r-- 2 boincer umatlas    507278 Mar 28 06:32 input.tar.gz
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas 331120846 Mar 29 11:42 HITS.pool.root.1
[2025-03-29 11:46:55] -rw------- 1 boincer umatlas  23418880 Mar 29 11:46 result.tar.gz
11:46:57 (28138): run_atlas exited; CPU time 123486.739771
11:46:57 (28138): called boinc_finish(0)

</stderr_txt>
]]>

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