Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:32:35 (894013): wrapper (7.7.26015): starting
03:32:35 (894013): wrapper: running run_atlas (--nthreads 8)
[2025-03-27 03:32:35] Arguments: --nthreads 8
[2025-03-27 03:32:35] Threads: 8
[2025-03-27 03:32:35] Checking for CVMFS
[2025-03-27 03:32:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-27 03:32:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-27 03:32:36] Running cvmfs_config stat atlas.cern.ch
[2025-03-27 03:32:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-27 03:32:38] 2.12.6.0 199032 45566 606788 144172 1 134 18530394 37641034 28751 130560 0 1968317 98.930 4479474 18776 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-03-27 03:32:38] CVMFS is ok
[2025-03-27 03:32:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-27 03:32:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-27 03:32:38] Further information can be found at the LHC@home message board.
[2025-03-27 03:32:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-27 03:32:38] Checking for apptainer binary...
[2025-03-27 03:32:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-27 03:32:38] Running /usr/bin/apptainer --version
[2025-03-27 03:32:38] apptainer version 1.3.6-1.el9
[2025-03-27 03:32:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-27 03:32:39] lc-10-9.aglt2.org
[2025-03-27 03:32:39] apptainer works
[2025-03-27 03:32:39] Set ATHENA_PROC_NUMBER=8
[2025-03-27 03:32:39] Set ATHENA_CORE_NUMBER=8
[2025-03-27 03:32:39] Starting ATLAS job with PandaID=6563242579
[2025-03-27 03:32:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-27 08:54:30]  *** The last 200 lines of the pilot log: ***
[2025-03-27 08:54:30] 2025-03-27 12:54:10,041 | INFO     | current chi2=5.952833774209243 (change=10.098822961191209 %)
[2025-03-27 08:54:30] 2025-03-27 12:54:10,041 | INFO     | right removable region: 306
[2025-03-27 08:54:30] 2025-03-27 12:54:10,041 | INFO     | model: linear, x: [1743061303.0, 1743061364.0, 1743061425.0, 1743061486.0, 1743061547.0, 1743061608.0, 1743061669.0, 1743061730.0, 1743061791.0, 1743061852.0, 1743
[2025-03-27 08:54:30] 2025-03-27 12:54:10,042 | INFO     | sum of square deviations: 8972126877.687344
[2025-03-27 08:54:30] 2025-03-27 12:54:10,055 | INFO     | sum of deviations: 132156050430.86647
[2025-03-27 08:54:30] 2025-03-27 12:54:10,056 | INFO     | mean x: 1743070636.2508144
[2025-03-27 08:54:30] 2025-03-27 12:54:10,056 | INFO     | mean y: 2149368.5342019545
[2025-03-27 08:54:30] 2025-03-27 12:54:10,056 | INFO     | -- intersect: -25672624745.70593
[2025-03-27 08:54:30] 2025-03-27 12:54:10,056 | INFO     | intersect: -25672624745.70593
[2025-03-27 08:54:30] 2025-03-27 12:54:10,057 | INFO     | chi2: 3.7182001028137863
[2025-03-27 08:54:30] 2025-03-27 12:54:10,057 | INFO     | current chi2=3.7182001028137863 (change=43.846816761957584 %)
[2025-03-27 08:54:30] 2025-03-27 12:54:10,057 | INFO     | model: linear, x: [1743061608.0, 1743061669.0, 1743061730.0, 1743061791.0, 1743061852.0, 1743061913.0, 1743061974.0, 1743062035.0, 1743062096.0, 1743062157.0, 1743
[2025-03-27 08:54:30] 2025-03-27 12:54:10,057 | INFO     | sum of square deviations: 8540830189.867517
[2025-03-27 08:54:30] 2025-03-27 12:54:10,080 | INFO     | sum of deviations: 79549810857.39073
[2025-03-27 08:54:30] 2025-03-27 12:54:10,080 | INFO     | mean x: 1743070788.754967
[2025-03-27 08:54:30] 2025-03-27 12:54:10,080 | INFO     | mean y: 2167964.072847682
[2025-03-27 08:54:30] 2025-03-27 12:54:10,081 | INFO     | -- intersect: -16232899175.068033
[2025-03-27 08:54:30] 2025-03-27 12:54:10,081 | INFO     | intersect: -16232899175.068033
[2025-03-27 08:54:30] 2025-03-27 12:54:10,081 | INFO     | chi2: 2.36804346345399
[2025-03-27 08:54:30] 2025-03-27 12:54:10,081 | INFO     | current chi2=2.36804346345399 (change=36.312102684792336 %)
[2025-03-27 08:54:30] 2025-03-27 12:54:10,082 | INFO     | model: linear, x: [1743061913.0, 1743061974.0, 1743062035.0, 1743062096.0, 1743062157.0, 1743062218.0, 1743062279.0, 1743062340.0, 1743062401.0, 1743062462.0, 1743
[2025-03-27 08:54:30] 2025-03-27 12:54:10,096 | INFO     | sum of square deviations: 8123580277.037021
[2025-03-27 08:54:30] 2025-03-27 12:54:10,099 | INFO     | sum of deviations: 30931249777.444405
[2025-03-27 08:54:30] 2025-03-27 12:54:10,099 | INFO     | mean x: 1743070941.2592592
[2025-03-27 08:54:30] 2025-03-27 12:54:10,099 | INFO     | mean y: 2185720.202020202
[2025-03-27 08:54:30] 2025-03-27 12:54:10,099 | INFO     | -- intersect: -6634710922.070129
[2025-03-27 08:54:30] 2025-03-27 12:54:10,099 | INFO     | intersect: -6634710922.070129
[2025-03-27 08:54:30] 2025-03-27 12:54:10,142 | INFO     | chi2: 1.1857541697893916
[2025-03-27 08:54:30] 2025-03-27 12:54:10,142 | INFO     | current chi2=1.1857541697893916 (change=49.92684095164918 %)
[2025-03-27 08:54:30] 2025-03-27 12:54:10,143 | INFO     | model: linear, x: [1743062218.0, 1743062279.0, 1743062340.0, 1743062401.0, 1743062462.0, 1743062523.0, 1743062584.0, 1743062645.0, 1743062706.0, 1743062767.0, 1743
[2025-03-27 08:54:30] 2025-03-27 12:54:10,143 | INFO     | sum of square deviations: 7720144576.695262
[2025-03-27 08:54:30] 2025-03-27 12:54:10,145 | INFO     | sum of deviations: 5887393542.438364
[2025-03-27 08:54:30] 2025-03-27 12:54:10,146 | INFO     | mean x: 1743071093.7636986
[2025-03-27 08:54:30] 2025-03-27 12:54:10,146 | INFO     | mean y: 2195165.890410959
[2025-03-27 08:54:30] 2025-03-27 12:54:10,146 | INFO     | -- intersect: -1327073398.899636
[2025-03-27 08:54:30] 2025-03-27 12:54:10,146 | INFO     | intersect: -1327073398.899636
[2025-03-27 08:54:30] 2025-03-27 12:54:10,146 | INFO     | chi2: 0.8513789330407245
[2025-03-27 08:54:30] 2025-03-27 12:54:10,147 | INFO     | current chi2=0.8513789330407245 (change=28.199372624433387 %)
[2025-03-27 08:54:30] 2025-03-27 12:54:10,147 | INFO     | model: linear, x: [1743062523.0, 1743062584.0, 1743062645.0, 1743062706.0, 1743062767.0, 1743062828.0, 1743062889.0, 1743062951.0, 1743063011.0, 1743063072.0, 1743
[2025-03-27 08:54:30] 2025-03-27 12:54:10,147 | INFO     | sum of square deviations: 7330290526.341467
[2025-03-27 08:54:30] 2025-03-27 12:54:10,172 | INFO     | sum of deviations: -5453559422.536591
[2025-03-27 08:54:30] 2025-03-27 12:54:10,172 | INFO     | mean x: 1743071246.2682927
[2025-03-27 08:54:30] 2025-03-27 12:54:10,172 | INFO     | mean y: 2199590.149825784
[2025-03-27 08:54:30] 2025-03-27 12:54:10,172 | INFO     | -- intersect: 1299002572.9346626
[2025-03-27 08:54:30] 2025-03-27 12:54:10,172 | INFO     | intersect: 1299002572.9346626
[2025-03-27 08:54:30] 2025-03-27 12:54:10,173 | INFO     | chi2: 0.780297473545003
[2025-03-27 08:54:30] 2025-03-27 12:54:10,173 | INFO     | current chi2=0.780297473545003 (change=8.348980311487393 %)
[2025-03-27 08:54:30] 2025-03-27 12:54:10,173 | INFO     | left removable region: 50
[2025-03-27 08:54:30] 2025-03-27 12:54:10,173 | INFO     | model: linear, x: [1743064048.0, 1743064109.0, 1743064170.0, 1743064231.0, 1743064292.0, 1743064353.0, 1743064415.0, 1743064476.0, 1743064536.0, 1743064597.0, 1743
[2025-03-27 08:54:30] 2025-03-27 12:54:10,174 | INFO     | sum of square deviations: 5202306314.308594
[2025-03-27 08:54:30] 2025-03-27 12:54:10,190 | INFO     | sum of deviations: 15368293442.742188
[2025-03-27 08:54:30] 2025-03-27 12:54:10,190 | INFO     | mean x: 1743071825.7773438
[2025-03-27 08:54:30] 2025-03-27 12:54:10,190 | INFO     | mean y: 2204768.6796875
[2025-03-27 08:54:30] 2025-03-27 12:54:10,190 | INFO     | -- intersect: -5147057441.552706
[2025-03-27 08:54:30] 2025-03-27 12:54:10,190 | INFO     | intersect: -5147057441.552706
[2025-03-27 08:54:30] 2025-03-27 12:54:10,191 | INFO     | chi2: 0.05711079326993867
[2025-03-27 08:54:30] 2025-03-27 12:54:10,191 | INFO     | -- intersect: -5147057441.552706
[2025-03-27 08:54:30] 2025-03-27 12:54:10,191 | INFO     | current memory leak: 2.95 B/s (using 256 data points, chi2=0.06)
[2025-03-27 08:54:30] 2025-03-27 12:54:10,227 | INFO     | ..............................
[2025-03-27 08:54:30] 2025-03-27 12:54:10,227 | INFO     | . Timing measurements:
[2025-03-27 08:54:30] 2025-03-27 12:54:10,227 | INFO     | . get job = 0 s
[2025-03-27 08:54:30] 2025-03-27 12:54:10,227 | INFO     | . initial setup = 8 s
[2025-03-27 08:54:30] 2025-03-27 12:54:10,227 | INFO     | . payload setup = 48 s
[2025-03-27 08:54:30] 2025-03-27 12:54:10,228 | INFO     | . stage-in = 0 s
[2025-03-27 08:54:30] 2025-03-27 12:54:10,228 | INFO     | . payload execution = 19024 s
[2025-03-27 08:54:30] 2025-03-27 12:54:10,228 | INFO     | . stage-out = 9 s
[2025-03-27 08:54:30] 2025-03-27 12:54:10,228 | INFO     | . log creation = 1 s
[2025-03-27 08:54:30] 2025-03-27 12:54:10,228 | INFO     | ..............................
[2025-03-27 08:54:30] 2025-03-27 12:54:10,980 | INFO     | 
[2025-03-27 08:54:30] 2025-03-27 12:54:10,980 | INFO     | job summary report
[2025-03-27 08:54:30] 2025-03-27 12:54:10,980 | INFO     | --------------------------------------------------
[2025-03-27 08:54:30] 2025-03-27 12:54:10,980 | INFO     | PanDA job id: 6563242579
[2025-03-27 08:54:30] 2025-03-27 12:54:10,980 | INFO     | task id: 43625221
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | errors: (none)
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | pilot state: finished 
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | transexitcode: 0
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | exeerrorcode: 0
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | exeerrordiag: 
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | exitcode: 0
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | exitmsg: OK
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | cpuconsumptiontime: 55497 s
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | nevents: 400
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | neventsw: 0
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | pid: 956234
[2025-03-27 08:54:30] 2025-03-27 12:54:10,981 | INFO     | pgrp: 956234
[2025-03-27 08:54:30] 2025-03-27 12:54:10,982 | INFO     | corecount: 8
[2025-03-27 08:54:30] 2025-03-27 12:54:10,982 | INFO     | event service: False
[2025-03-27 08:54:30] 2025-03-27 12:54:10,982 | INFO     | sizes: {0: 2410119, 1: 2410804, 2: 2410832, 3: 2411031, 15: 2411031, 26: 2411059, 37: 2411215, 41: 2411449, 48: 2411477, 19079: 2443439, 19080: 2443438, 19090: 245
[2025-03-27 08:54:30] 2025-03-27 12:54:10,982 | INFO     | --------------------------------------------------
[2025-03-27 08:54:30] 2025-03-27 12:54:10,982 | INFO     | 
[2025-03-27 08:54:30] 2025-03-27 12:54:10,982 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-03-27 08:54:30] 2025-03-27 12:54:11,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,178 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,179 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,180 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-27 08:54:30] 2025-03-27 12:54:11,180 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,180 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-27 08:54:30] 2025-03-27 12:54:11,180 | INFO     | job 6563242579 has completed (purged errors)
[2025-03-27 08:54:30] 2025-03-27 12:54:11,180 | INFO     | overall cleanup function is called
[2025-03-27 08:54:30] 2025-03-27 12:54:12,213 | INFO     | --- collectZombieJob: --- 10, [956234]
[2025-03-27 08:54:30] 2025-03-27 12:54:12,213 | INFO     | zombie collector waiting for pid 956234
[2025-03-27 08:54:30] 2025-03-27 12:54:12,213 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-27 08:54:30] 2025-03-27 12:54:12,213 | INFO     | collected zombie processes
[2025-03-27 08:54:30] 2025-03-27 12:54:12,213 | INFO     | will attempt to kill all subprocesses of pid=956234
[2025-03-27 08:54:30] 2025-03-27 12:54:15,143 | INFO     | process IDs to be killed: [956234] (in reverse order)
[2025-03-27 08:54:30] 2025-03-27 12:54:15,581 | WARNING  | found no corresponding commands to process id(s)
[2025-03-27 08:54:30] 2025-03-27 12:54:15,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-27 08:54:30] 2025-03-27 12:54:15,694 | INFO     | did not find any defunct processes belonging to 956234
[2025-03-27 08:54:30] 2025-03-27 12:54:15,856 | INFO     | did not find any defunct processes belonging to 956234
[2025-03-27 08:54:30] 2025-03-27 12:54:15,856 | INFO     | ready for new job
[2025-03-27 08:54:30] 2025-03-27 12:54:15,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-27 08:54:30] 2025-03-27 12:54:15,882 | INFO     | ***************************************
[2025-03-27 08:54:30] 2025-03-27 12:54:15,883 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-03-27 08:54:30] 2025-03-27 12:54:15,883 | INFO     | ***************************************
[2025-03-27 08:54:30] 2025-03-27 12:54:15,883 | INFO     | 
[2025-03-27 08:54:30] 2025-03-27 12:54:15,897 | INFO     | architecture information:
[2025-03-27 08:54:30] 2025-03-27 12:54:15,904 | INFO     | executing command: cat /etc/os-release
[2025-03-27 08:54:30] 2025-03-27 12:54:16,071 | INFO     | cat /etc/os-release:
[2025-03-27 08:54:30] NAME="CentOS Linux"
[2025-03-27 08:54:30] VERSION="7 (Core)"
[2025-03-27 08:54:30] ID="centos"
[2025-03-27 08:54:30] ID_LIKE="rhel fedora"
[2025-03-27 08:54:30] VERSION_ID="7"
[2025-03-27 08:54:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-27 08:54:30] ANSI_COLOR="0;31"
[2025-03-27 08:54:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-27 08:54:30] HOME_URL="https://www.centos.org/"
[2025-03-27 08:54:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-27 08:54:30] 
[2025-03-27 08:54:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-27 08:54:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-27 08:54:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-27 08:54:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-27 08:54:30] 
[2025-03-27 08:54:30] 2025-03-27 12:54:16,072 | INFO     | ***************************************
[2025-03-27 08:54:30] 2025-03-27 12:54:16,614 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-03-27 08:54:30] 2025-03-27 12:54:16,701 | INFO     | sufficient remaining disk space (85436923904 B)
[2025-03-27 08:54:30] 2025-03-27 12:54:16,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-27 08:54:30] 2025-03-27 12:54:16,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-27 08:54:30] 2025-03-27 12:54:16,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-27 08:54:30] 2025-03-27 12:54:16,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-27 08:54:30] 2025-03-27 12:54:16,702 | INFO     | aborting loop
[2025-03-27 08:54:30] 2025-03-27 12:54:17,072 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-27 08:54:30] 2025-03-27 12:54:17,495 | INFO     | all job control threads have been joined
[2025-03-27 08:54:30] 2025-03-27 12:54:17,621 | INFO     | all payload control threads have been joined
[2025-03-27 08:54:30] 2025-03-27 12:54:17,727 | INFO     | [job] job monitor thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:17,728 | INFO     | [job] queue monitor thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:17,728 | INFO     | [job] retrieve thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:17,732 | INFO     | all data control threads have been joined
[2025-03-27 08:54:30] 2025-03-27 12:54:17,853 | INFO     | PID=910065 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-03-27 08:54:30] 2025-03-27 12:54:17,853 | INFO     | .. there are 88 such processes running
[2025-03-27 08:54:30] 2025-03-27 12:54:17,854 | INFO     | found 0 job(s) in 20 queues
[2025-03-27 08:54:30] 2025-03-27 12:54:17,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-27 08:54:30] 2025-03-27 12:54:17,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-27 08:54:30] 2025-03-27 12:54:18,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-27 08:54:30] 2025-03-27 12:54:18,175 | INFO     | [payload] validate_post thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:18,502 | INFO     | [job] control thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:18,627 | INFO     | [payload] control thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:18,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:18,649 | INFO     | [payload] validate_pre thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:18,677 | INFO     | [data] copytool_in thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:18,743 | INFO     | [data] control thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:19,079 | INFO     | [job] validate thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:19,079 | INFO     | [job] create_data_payload thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:19,129 | INFO     | [payload] execute_payloads thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:19,180 | INFO     | [payload] failed_post thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:20,131 | INFO     | [data] copytool_out thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:21,081 | INFO     | [data] queue_monitor thread has finished
[2025-03-27 08:54:30] 2025-03-27 12:54:21,902 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457988511552)>', '<ExcThread(monitor, started 140457325598464)>']
[2025-03-27 08:54:30] 2025-03-27 12:54:22,885 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-27 08:54:30] 2025-03-27 12:54:22,885 | INFO     | [monitor] control thread has ended
[2025-03-27 08:54:30] 2025-03-27 12:54:26,930 | INFO     | all workflow threads have been joined
[2025-03-27 08:54:30] 2025-03-27 12:54:26,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-27 08:54:30] 2025-03-27 12:54:26,931 | INFO     | traces error code: 0
[2025-03-27 08:54:30] 2025-03-27 12:54:26,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-27 08:54:30] 2025-03-27 12:54:29,493 [wrapper] ==== pilot stdout END ====
[2025-03-27 08:54:30] 2025-03-27 12:54:29,509 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-27 08:54:30] 2025-03-27 12:54:29,528 [wrapper] pilotpid: 910065
[2025-03-27 08:54:30] 2025-03-27 12:54:29,552 [wrapper] Pilot exit status: 0
[2025-03-27 08:54:30] 2025-03-27 12:54:29,697 [wrapper] pandaids: 6563242579
[2025-03-27 08:54:30] 2025-03-27 12:54:30,053 [wrapper] cleanup supervisor_pilot 2034926 910066
[2025-03-27 08:54:30] 2025-03-27 12:54:30,095 [wrapper] Test setup, not cleaning
[2025-03-27 08:54:30] 2025-03-27 12:54:30,166 [wrapper] apfmon messages muted
[2025-03-27 08:54:30] 2025-03-27 12:54:30,225 [wrapper] ==== wrapper stdout END ====
[2025-03-27 08:54:30] 2025-03-27 12:54:30,276 [wrapper] ==== wrapper stderr END ====
[2025-03-27 08:54:30]  *** Error codes and diagnostics ***
[2025-03-27 08:54:30]     "exeErrorCode": 0,
[2025-03-27 08:54:30]     "exeErrorDiag": "",
[2025-03-27 08:54:30]     "pilotErrorCode": 0,
[2025-03-27 08:54:30]     "pilotErrorDiag": "",
[2025-03-27 08:54:30]  *** Listing of results directory ***
[2025-03-27 08:54:30] total 467516
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas    494584 Mar 18 23:55 pilot3.tar.gz
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas      5119 Mar 19 00:20 queuedata.json
[2025-03-27 08:54:30] -rwx------. 1 boincer umatlas     35865 Mar 19 00:20 runpilot2-wrapper.sh
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas       100 Mar 27 03:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-27 08:54:30] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 27 03:32 run_atlas
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas       105 Mar 27 03:32 job.xml
[2025-03-27 08:54:30] -rw-r--r--. 2 boincer umatlas 314091907 Mar 27 03:32 EVNT.43625217._000026.pool.root.1
[2025-03-27 08:54:30] -rw-r--r--. 2 boincer umatlas     17571 Mar 27 03:32 start_atlas.sh
[2025-03-27 08:54:30] drwxrwx--x. 2 boincer umatlas      4096 Mar 27 03:32 shared
[2025-03-27 08:54:30] -rw-r--r--. 2 boincer umatlas    507042 Mar 27 03:32 input.tar.gz
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas         0 Mar 27 03:32 boinc_lockfile
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas      2533 Mar 27 03:32 pandaJob.out
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas       467 Mar 27 03:32 setup.sh.local
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas    994644 Mar 27 03:33 agis_schedconf.cvmfs.json
[2025-03-27 08:54:30] drwx------. 4 boincer umatlas      4096 Mar 27 03:33 pilot3
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas      6866 Mar 27 08:45 init_data.xml
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas 156317707 Mar 27 08:51 HITS.43625221._000638.pool.root.1
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas       531 Mar 27 08:52 boinc_task_state.xml
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas      1042 Mar 27 08:53 memory_monitor_summary.json
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas   1599151 Mar 27 08:53 agis_ddmendpoints.agis.ALL.json
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas    444020 Mar 27 08:53 log.43625221._000638.job.log.tgz.1
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas        95 Mar 27 08:53 pilot_heartbeat.json
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas      8192 Mar 27 08:54 boinc_mmap_file
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas        28 Mar 27 08:54 wrapper_checkpoint.txt
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas      7710 Mar 27 08:54 heartbeat.json
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas      4613 Mar 27 08:54 pilotlog.txt
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas   1800729 Mar 27 08:54 log.43625221._000638.job.log.1
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas       357 Mar 27 08:54 output.list
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas       620 Mar 27 08:54 runtime_log
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas   2263040 Mar 27 08:54 result.tar.gz
[2025-03-27 08:54:30] -rw-------. 1 boincer umatlas       657 Mar 27 08:54 Q9vKDmJ6zE7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmqF4KDmyOUQUn.diag
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas     11415 Mar 27 08:54 runtime_log.err
[2025-03-27 08:54:30] -rw-r--r--. 1 boincer umatlas     21792 Mar 27 08:54 stderr.txt
[2025-03-27 08:54:31] HITS file was successfully produced:
[2025-03-27 08:54:31] -rw-------. 1 boincer umatlas 156317707 Mar 27 08:51 shared/HITS.pool.root.1
[2025-03-27 08:54:31]  *** Contents of shared directory: ***
[2025-03-27 08:54:31] total 462124
[2025-03-27 08:54:31] -rw-r--r--. 2 boincer umatlas 314091907 Mar 27 03:32 ATLAS.root_0
[2025-03-27 08:54:31] -rw-r--r--. 2 boincer umatlas     17571 Mar 27 03:32 start_atlas.sh
[2025-03-27 08:54:31] -rw-r--r--. 2 boincer umatlas    507042 Mar 27 03:32 input.tar.gz
[2025-03-27 08:54:31] -rw-------. 1 boincer umatlas 156317707 Mar 27 08:51 HITS.pool.root.1
[2025-03-27 08:54:31] -rw-------. 1 boincer umatlas   2263040 Mar 27 08:54 result.tar.gz
08:54:32 (894013): run_atlas exited; CPU time 55683.173802
08:54:32 (894013): called boinc_finish(0)

</stderr_txt>
]]>

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