Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:11:13 (3521839): wrapper (7.7.26015): starting
12:11:13 (3521839): wrapper: running run_atlas (--nthreads 8)
[2025-03-25 12:11:13] Arguments: --nthreads 8
[2025-03-25 12:11:13] Threads: 8
[2025-03-25 12:11:13] Checking for CVMFS
[2025-03-25 12:11:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-25 12:11:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-25 12:11:14] Running cvmfs_config stat atlas.cern.ch
[2025-03-25 12:11:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-25 12:11:16] 2.12.6.0 2972495 11286 402856 144109 2 657 18673639 37641216 28045 130560 0 1639274 98.725 5149216 21376 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-03-25 12:11:16] CVMFS is ok
[2025-03-25 12:11:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-25 12:11:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-25 12:11:16] Further information can be found at the LHC@home message board.
[2025-03-25 12:11:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-25 12:11:16] Checking for apptainer binary...
[2025-03-25 12:11:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-25 12:11:16] Running /usr/bin/apptainer --version
[2025-03-25 12:11:16] apptainer version 1.3.6-1.el9
[2025-03-25 12:11:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-25 12:11:17] c-1-3.aglt2.org
[2025-03-25 12:11:17] apptainer works
[2025-03-25 12:11:17] Set ATHENA_PROC_NUMBER=8
[2025-03-25 12:11:17] Set ATHENA_CORE_NUMBER=8
[2025-03-25 12:11:17] Starting ATLAS job with PandaID=6563725988
[2025-03-25 12:11:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-25 23:27:58]  *** The last 200 lines of the pilot log: ***
[2025-03-25 23:27:58] 2025-03-26 03:27:32,519 | INFO     | sum of square deviations: 88742233850.61913
[2025-03-25 23:27:58] 2025-03-26 03:27:32,558 | INFO     | sum of deviations: 351407330050.98456
[2025-03-25 23:27:58] 2025-03-26 03:27:32,558 | INFO     | mean x: 1742939466.646434
[2025-03-25 23:27:58] 2025-03-26 03:27:32,558 | INFO     | mean y: 2151022.248861912
[2025-03-25 23:27:58] 2025-03-26 03:27:32,558 | INFO     | -- intersect: -6899655229.841978
[2025-03-25 23:27:58] 2025-03-26 03:27:32,558 | INFO     | intersect: -6899655229.841978
[2025-03-25 23:27:58] 2025-03-26 03:27:32,566 | INFO     | chi2: 10.997104693778235
[2025-03-25 23:27:58] 2025-03-26 03:27:32,567 | INFO     | model: linear, x: [1742919397.0, 1742919458.0, 1742919519.0, 1742919580.0, 1742919641.0, 1742919702.0, 1742919763.0, 1742919824.0, 1742919885.0, 1742919946.0, 1742
[2025-03-25 23:27:58] 2025-03-26 03:27:32,574 | INFO     | sum of square deviations: 86737662981.31548
[2025-03-25 23:27:58] 2025-03-26 03:27:32,654 | INFO     | sum of deviations: 504824405487.2105
[2025-03-25 23:27:58] 2025-03-26 03:27:32,655 | INFO     | mean x: 1742939314.149847
[2025-03-25 23:27:58] 2025-03-26 03:27:32,655 | INFO     | mean y: 2162682.110091743
[2025-03-25 23:27:58] 2025-03-26 03:27:32,655 | INFO     | -- intersect: -10141969322.639923
[2025-03-25 23:27:58] 2025-03-26 03:27:32,655 | INFO     | intersect: -10141969322.639923
[2025-03-25 23:27:58] 2025-03-26 03:27:32,660 | INFO     | chi2: 8.065760394029066
[2025-03-25 23:27:58] 2025-03-26 03:27:32,660 | INFO     | current chi2=8.065760394029066 (change=26.655600554640692 %)
[2025-03-25 23:27:58] 2025-03-26 03:27:32,661 | INFO     | model: linear, x: [1742919397.0, 1742919458.0, 1742919519.0, 1742919580.0, 1742919641.0, 1742919702.0, 1742919763.0, 1742919824.0, 1742919885.0, 1742919946.0, 1742
[2025-03-25 23:27:58] 2025-03-26 03:27:32,662 | INFO     | sum of square deviations: 84763511042.99619
[2025-03-25 23:27:58] 2025-03-26 03:27:32,729 | INFO     | sum of deviations: 533401158154.0506
[2025-03-25 23:27:58] 2025-03-26 03:27:32,752 | INFO     | mean x: 1742939161.6533127
[2025-03-25 23:27:58] 2025-03-26 03:27:32,752 | INFO     | mean y: 2164882.813559322
[2025-03-25 23:27:58] 2025-03-26 03:27:32,753 | INFO     | -- intersect: -10965830142.148834
[2025-03-25 23:27:58] 2025-03-26 03:27:32,753 | INFO     | intersect: -10965830142.148834
[2025-03-25 23:27:58] 2025-03-26 03:27:32,754 | INFO     | chi2: 7.880827237996623
[2025-03-25 23:27:58] 2025-03-26 03:27:32,754 | INFO     | current chi2=7.880827237996623 (change=2.2928173786236643 %)
[2025-03-25 23:27:58] 2025-03-26 03:27:32,754 | INFO     | right removable region: 648
[2025-03-25 23:27:58] 2025-03-26 03:27:32,755 | INFO     | model: linear, x: [1742919702.0, 1742919763.0, 1742919824.0, 1742919885.0, 1742919946.0, 1742920007.0, 1742920068.0, 1742920129.0, 1742920190.0, 1742920251.0, 1742
[2025-03-25 23:27:58] 2025-03-26 03:27:32,755 | INFO     | sum of square deviations: 86737443076.01352
[2025-03-25 23:27:58] 2025-03-26 03:27:32,839 | INFO     | sum of deviations: 184487512275.33078
[2025-03-25 23:27:58] 2025-03-26 03:27:32,839 | INFO     | mean x: 1742939619.1513762
[2025-03-25 23:27:58] 2025-03-26 03:27:32,840 | INFO     | mean y: 2163711.29969419
[2025-03-25 23:27:58] 2025-03-26 03:27:32,840 | INFO     | -- intersect: -3705007989.64098
[2025-03-25 23:27:58] 2025-03-26 03:27:32,840 | INFO     | intersect: -3705007989.64098
[2025-03-25 23:27:58] 2025-03-26 03:27:32,841 | INFO     | chi2: 7.822479864087736
[2025-03-25 23:27:58] 2025-03-26 03:27:32,841 | INFO     | current chi2=7.822479864087736 (change=28.867824014502535 %)
[2025-03-25 23:27:58] 2025-03-26 03:27:32,842 | INFO     | model: linear, x: [1742920007.0, 1742920068.0, 1742920129.0, 1742920190.0, 1742920251.0, 1742920313.0, 1742920373.0, 1742920435.0, 1742920495.0, 1742920557.0, 1742
[2025-03-25 23:27:58] 2025-03-26 03:27:32,875 | INFO     | sum of square deviations: 84763071476.37573
[2025-03-25 23:27:58] 2025-03-26 03:27:32,936 | INFO     | sum of deviations: 82025293879.34705
[2025-03-25 23:27:58] 2025-03-26 03:27:32,937 | INFO     | mean x: 1742939771.6563945
[2025-03-25 23:27:58] 2025-03-26 03:27:32,937 | INFO     | mean y: 2171624.302003082
[2025-03-25 23:27:58] 2025-03-26 03:27:32,937 | INFO     | -- intersect: -1684472624.1188853
[2025-03-25 23:27:58] 2025-03-26 03:27:32,937 | INFO     | intersect: -1684472624.1188853
[2025-03-25 23:27:58] 2025-03-26 03:27:32,988 | INFO     | chi2: 6.676745968264447
[2025-03-25 23:27:58] 2025-03-26 03:27:32,988 | INFO     | current chi2=6.676745968264447 (change=14.64668386151104 %)
[2025-03-25 23:27:58] 2025-03-26 03:27:32,989 | INFO     | left removable region: 20
[2025-03-25 23:27:58] 2025-03-26 03:27:32,989 | INFO     | model: linear, x: [1742920617.0, 1742920679.0, 1742920739.0, 1742920800.0, 1742920862.0, 1742920922.0, 1742920983.0, 1742921045.0, 1742921106.0, 1742921168.0, 1742
[2025-03-25 23:27:58] 2025-03-26 03:27:32,991 | INFO     | sum of square deviations: 76798211006.10774
[2025-03-25 23:27:58] 2025-03-26 03:27:33,183 | INFO     | sum of deviations: 73508750222.99039
[2025-03-25 23:27:58] 2025-03-26 03:27:33,183 | INFO     | mean x: 1742939741.1687899
[2025-03-25 23:27:58] 2025-03-26 03:27:33,183 | INFO     | mean y: 2202691.132165605
[2025-03-25 23:27:58] 2025-03-26 03:27:33,183 | INFO     | -- intersect: -1666082551.568483
[2025-03-25 23:27:58] 2025-03-26 03:27:33,183 | INFO     | intersect: -1666082551.568483
[2025-03-25 23:27:58] 2025-03-26 03:27:33,205 | INFO     | chi2: 1.2404727975244558
[2025-03-25 23:27:58] 2025-03-26 03:27:33,206 | INFO     | -- intersect: -1666082551.568483
[2025-03-25 23:27:58] 2025-03-26 03:27:33,206 | INFO     | current memory leak: 0.96 B/s (using 628 data points, chi2=1.24)
[2025-03-25 23:27:58] 2025-03-26 03:27:33,207 | INFO     | ..............................
[2025-03-25 23:27:58] 2025-03-26 03:27:33,207 | INFO     | . Timing measurements:
[2025-03-25 23:27:58] 2025-03-26 03:27:33,207 | INFO     | . get job = 1 s
[2025-03-25 23:27:58] 2025-03-26 03:27:33,208 | INFO     | . initial setup = 9 s
[2025-03-25 23:27:58] 2025-03-26 03:27:33,208 | INFO     | . payload setup = 68 s
[2025-03-25 23:27:58] 2025-03-26 03:27:33,208 | INFO     | . stage-in = 0 s
[2025-03-25 23:27:58] 2025-03-26 03:27:33,208 | INFO     | . payload execution = 40225 s
[2025-03-25 23:27:58] 2025-03-26 03:27:33,208 | INFO     | . stage-out = 10 s
[2025-03-25 23:27:58] 2025-03-26 03:27:33,208 | INFO     | . log creation = 1 s
[2025-03-25 23:27:58] 2025-03-26 03:27:33,208 | INFO     | ..............................
[2025-03-25 23:27:58] 2025-03-26 03:27:33,758 | INFO     | 
[2025-03-25 23:27:58] 2025-03-26 03:27:33,758 | INFO     | job summary report
[2025-03-25 23:27:58] 2025-03-26 03:27:33,758 | INFO     | --------------------------------------------------
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | PanDA job id: 6563725988
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | task id: 43634914
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | errors: (none)
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | pilot state: finished 
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | transexitcode: 0
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | exeerrorcode: 0
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | exeerrordiag: 
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | exitcode: 0
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | exitmsg: OK
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | cpuconsumptiontime: 88347 s
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | nevents: 400
[2025-03-25 23:27:58] 2025-03-26 03:27:33,759 | INFO     | neventsw: 0
[2025-03-25 23:27:58] 2025-03-26 03:27:33,760 | INFO     | pid: 3596054
[2025-03-25 23:27:58] 2025-03-26 03:27:33,760 | INFO     | pgrp: 3596054
[2025-03-25 23:27:58] 2025-03-26 03:27:33,760 | INFO     | corecount: 8
[2025-03-25 23:27:58] 2025-03-26 03:27:33,760 | INFO     | event service: False
[2025-03-25 23:27:58] 2025-03-26 03:27:33,760 | INFO     | sizes: {0: 2408202, 1: 2408887, 2: 2409086, 3: 2409086, 14: 2409114, 25: 2409142, 37: 2409298, 48: 2409326, 54: 2409560, 59: 2409588, 40299: 2450983, 40300: 245126
[2025-03-25 23:27:58] 2025-03-26 03:27:33,760 | INFO     | --------------------------------------------------
[2025-03-25 23:27:58] 2025-03-26 03:27:33,760 | INFO     | 
[2025-03-25 23:27:58] 2025-03-26 03:27:33,760 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-03-25 23:27:58] 2025-03-26 03:27:34,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,027 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,027 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,027 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,027 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,028 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-25 23:27:58] 2025-03-26 03:27:34,029 | INFO     | job 6563725988 has completed (purged errors)
[2025-03-25 23:27:58] 2025-03-26 03:27:34,039 | INFO     | overall cleanup function is called
[2025-03-25 23:27:58] 2025-03-26 03:27:35,056 | INFO     | --- collectZombieJob: --- 10, [3596054]
[2025-03-25 23:27:58] 2025-03-26 03:27:35,056 | INFO     | zombie collector waiting for pid 3596054
[2025-03-25 23:27:58] 2025-03-26 03:27:35,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-25 23:27:58] 2025-03-26 03:27:35,057 | INFO     | collected zombie processes
[2025-03-25 23:27:58] 2025-03-26 03:27:35,057 | INFO     | will attempt to kill all subprocesses of pid=3596054
[2025-03-25 23:27:58] 2025-03-26 03:27:39,097 | INFO     | process IDs to be killed: [3596054] (in reverse order)
[2025-03-25 23:27:58] 2025-03-26 03:27:39,820 [wrapper] supervise_pilot (15 min periods counter: 46)
[2025-03-25 23:27:58] 2025-03-26 03:27:41,097 | WARNING  | found no corresponding commands to process id(s)
[2025-03-25 23:27:58] 2025-03-26 03:27:41,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-25 23:27:58] 2025-03-26 03:27:41,685 | INFO     | did not find any defunct processes belonging to 3596054
[2025-03-25 23:27:58] 2025-03-26 03:27:42,116 | INFO     | did not find any defunct processes belonging to 3596054
[2025-03-25 23:27:58] 2025-03-26 03:27:42,116 | INFO     | ready for new job
[2025-03-25 23:27:58] 2025-03-26 03:27:42,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-25 23:27:58] 2025-03-26 03:27:42,209 | INFO     | ***************************************
[2025-03-25 23:27:58] 2025-03-26 03:27:42,209 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-03-25 23:27:58] 2025-03-26 03:27:42,209 | INFO     | ***************************************
[2025-03-25 23:27:58] 2025-03-26 03:27:42,209 | INFO     | 
[2025-03-25 23:27:58] 2025-03-26 03:27:42,309 | INFO     | architecture information:
[2025-03-25 23:27:58] 2025-03-26 03:27:42,324 | INFO     | executing command: cat /etc/os-release
[2025-03-25 23:27:58] 2025-03-26 03:27:42,504 | INFO     | cat /etc/os-release:
[2025-03-25 23:27:58] NAME="CentOS Linux"
[2025-03-25 23:27:58] VERSION="7 (Core)"
[2025-03-25 23:27:58] ID="centos"
[2025-03-25 23:27:58] ID_LIKE="rhel fedora"
[2025-03-25 23:27:58] VERSION_ID="7"
[2025-03-25 23:27:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-25 23:27:58] ANSI_COLOR="0;31"
[2025-03-25 23:27:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-25 23:27:58] HOME_URL="https://www.centos.org/"
[2025-03-25 23:27:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-25 23:27:58] 
[2025-03-25 23:27:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-25 23:27:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-25 23:27:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-25 23:27:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-25 23:27:58] 
[2025-03-25 23:27:58] 2025-03-26 03:27:42,505 | INFO     | ***************************************
[2025-03-25 23:27:58] 2025-03-26 03:27:43,008 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-03-25 23:27:58] 2025-03-26 03:27:43,308 | INFO     | sufficient remaining disk space (49557798912 B)
[2025-03-25 23:27:58] 2025-03-26 03:27:43,308 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-25 23:27:58] 2025-03-26 03:27:43,309 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-25 23:27:58] 2025-03-26 03:27:43,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-25 23:27:58] 2025-03-26 03:27:43,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-25 23:27:58] 2025-03-26 03:27:43,600 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-03-25 23:27:58] 2025-03-26 03:27:43,600 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-03-25 23:27:58] 2025-03-26 03:27:43,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-25 23:27:58] 2025-03-26 03:27:43,601 | INFO     | will abort loop
[2025-03-25 23:27:58] 2025-03-26 03:27:43,750 | INFO     | all job control threads have been joined
[2025-03-25 23:27:58] 2025-03-26 03:27:44,314 | INFO     | [job] retrieve thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:44,328 | INFO     | [job] queue monitor thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:44,547 | INFO     | [job] validate thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:44,562 | INFO     | all data control threads have been joined
[2025-03-25 23:27:58] 2025-03-26 03:27:44,623 | INFO     | [job] job monitor thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:44,772 | INFO     | [job] control thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:44,854 | INFO     | all payload control threads have been joined
[2025-03-25 23:27:58] 2025-03-26 03:27:45,028 | INFO     | [data] copytool_in thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,130 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-25 23:27:58] 2025-03-26 03:27:45,335 | INFO     | [data] copytool_out thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,553 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,554 | INFO     | [payload] execute_payloads thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,559 | INFO     | [payload] failed_post thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,572 | INFO     | [data] control thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,828 | INFO     | [payload] validate_pre thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,837 | INFO     | [payload] validate_post thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,852 | INFO     | [job] create_data_payload thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:45,883 | INFO     | [payload] control thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:46,297 | INFO     | PID=3555599 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-03-25 23:27:58] 2025-03-26 03:27:46,298 | INFO     | .. there are 82 such processes running
[2025-03-25 23:27:58] 2025-03-26 03:27:46,361 | INFO     | found 0 job(s) in 20 queues
[2025-03-25 23:27:58] 2025-03-26 03:27:46,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-25 23:27:58] 2025-03-26 03:27:46,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-25 23:27:58] 2025-03-26 03:27:49,139 | INFO     | [data] queue_monitor thread has finished
[2025-03-25 23:27:58] 2025-03-26 03:27:49,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650272606016)>', '<ExcThread(monitor, started 140649483454208)>']
[2025-03-25 23:27:58] 2025-03-26 03:27:49,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-25 23:27:58] 2025-03-26 03:27:49,393 | INFO     | [monitor] control thread has ended
[2025-03-25 23:27:58] 2025-03-26 03:27:54,176 | INFO     | all workflow threads have been joined
[2025-03-25 23:27:58] 2025-03-26 03:27:54,177 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-25 23:27:58] 2025-03-26 03:27:54,178 | INFO     | traces error code: 0
[2025-03-25 23:27:58] 2025-03-26 03:27:54,178 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-25 23:27:58] 2025-03-26 03:27:55,606 [wrapper] ==== pilot stdout END ====
[2025-03-25 23:27:58] 2025-03-26 03:27:55,628 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-25 23:27:58] 2025-03-26 03:27:55,666 [wrapper] pilotpid: 3555599
[2025-03-25 23:27:58] 2025-03-26 03:27:55,695 [wrapper] Pilot exit status: 0
[2025-03-25 23:27:58] 2025-03-26 03:27:55,898 [wrapper] pandaids: 6563725988
[2025-03-25 23:27:58] 2025-03-26 03:27:57,010 [wrapper] cleanup supervisor_pilot 2948095 3555600
[2025-03-25 23:27:58] 2025-03-26 03:27:57,056 [wrapper] Test setup, not cleaning
[2025-03-25 23:27:58] 2025-03-26 03:27:57,141 [wrapper] apfmon messages muted
[2025-03-25 23:27:58] 2025-03-26 03:27:57,191 [wrapper] ==== wrapper stdout END ====
[2025-03-25 23:27:58] 2025-03-26 03:27:57,233 [wrapper] ==== wrapper stderr END ====
[2025-03-25 23:27:58]  *** Error codes and diagnostics ***
[2025-03-25 23:27:58]     "exeErrorCode": 0,
[2025-03-25 23:27:58]     "exeErrorDiag": "",
[2025-03-25 23:27:58]     "pilotErrorCode": 0,
[2025-03-25 23:27:58]     "pilotErrorDiag": "",
[2025-03-25 23:27:58]  *** Listing of results directory ***
[2025-03-25 23:27:58] total 676552
[2025-03-25 23:27:58] -rwx------. 1 boincer umatlas     35865 Mar 19 18:51 runpilot2-wrapper.sh
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas      5119 Mar 19 18:51 queuedata.json
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas    494584 Mar 19 18:51 pilot3.tar.gz
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas       100 Mar 25 12:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-25 23:27:58] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 25 12:11 run_atlas
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas       105 Mar 25 12:11 job.xml
[2025-03-25 23:27:58] -rw-r--r--. 2 boincer umatlas 357182327 Mar 25 12:11 EVNT.43634912._000201.pool.root.1
[2025-03-25 23:27:58] -rw-r--r--. 2 boincer umatlas     17571 Mar 25 12:11 start_atlas.sh
[2025-03-25 23:27:58] drwxrwx--x. 2 boincer umatlas      4096 Mar 25 12:11 shared
[2025-03-25 23:27:58] -rw-r--r--. 2 boincer umatlas    507054 Mar 25 12:11 input.tar.gz
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas         0 Mar 25 12:11 boinc_lockfile
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas      2618 Mar 25 12:11 pandaJob.out
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas       467 Mar 25 12:11 setup.sh.local
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas    990251 Mar 25 12:12 agis_schedconf.cvmfs.json
[2025-03-25 23:27:58] drwx------. 4 boincer umatlas      4096 Mar 25 12:12 pilot3
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas      6837 Mar 25 23:20 init_data.xml
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas 321613204 Mar 25 23:22 HITS.43634914._005020.pool.root.1
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas       532 Mar 25 23:22 boinc_task_state.xml
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas      1041 Mar 25 23:26 memory_monitor_summary.json
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas   1604454 Mar 25 23:26 agis_ddmendpoints.agis.ALL.json
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas    693108 Mar 25 23:26 log.43634914._005020.job.log.tgz.1
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas      7713 Mar 25 23:27 heartbeat.json
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas        95 Mar 25 23:27 pilot_heartbeat.json
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas      4800 Mar 25 23:27 pilotlog.txt
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas        28 Mar 25 23:27 wrapper_checkpoint.txt
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas   4383911 Mar 25 23:27 log.43634914._005020.job.log.1
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas       357 Mar 25 23:27 output.list
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas      8192 Mar 25 23:27 boinc_mmap_file
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas       620 Mar 25 23:27 runtime_log
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas   5099520 Mar 25 23:27 result.tar.gz
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas       656 Mar 25 23:27 vKbMDmNRHF7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVj5KDmtFLAJm.diag
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas     11405 Mar 25 23:27 runtime_log.err
[2025-03-25 23:27:58] -rw-r--r--. 1 boincer umatlas     21668 Mar 25 23:27 stderr.txt
[2025-03-25 23:27:58] HITS file was successfully produced:
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas 321613204 Mar 25 23:22 shared/HITS.pool.root.1
[2025-03-25 23:27:58]  *** Contents of shared directory: ***
[2025-03-25 23:27:58] total 668392
[2025-03-25 23:27:58] -rw-r--r--. 2 boincer umatlas 357182327 Mar 25 12:11 ATLAS.root_0
[2025-03-25 23:27:58] -rw-r--r--. 2 boincer umatlas     17571 Mar 25 12:11 start_atlas.sh
[2025-03-25 23:27:58] -rw-r--r--. 2 boincer umatlas    507054 Mar 25 12:11 input.tar.gz
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas 321613204 Mar 25 23:22 HITS.pool.root.1
[2025-03-25 23:27:58] -rw-------. 1 boincer umatlas   5099520 Mar 25 23:27 result.tar.gz
23:28:20 (3521839): run_atlas exited; CPU time 88422.419256
23:28:20 (3521839): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN