Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:46:28 (3054643): wrapper (7.7.26015): starting
00:46:28 (3054643): wrapper: running run_atlas (--nthreads 8)
[2025-03-23 00:46:28] Arguments: --nthreads 8
[2025-03-23 00:46:28] Threads: 8
[2025-03-23 00:46:28] Checking for CVMFS
[2025-03-23 00:46:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-23 00:46:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-23 00:46:29] Running cvmfs_config stat atlas.cern.ch
[2025-03-23 00:46:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-23 00:46:30] 2.12.6.0 199032 39640 606348 144017 1 428 28153865 37641217 46100 130560 0 10998124 99.678 9040659 23051 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-03-23 00:46:30] CVMFS is ok
[2025-03-23 00:46:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-23 00:46:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-23 00:46:30] Further information can be found at the LHC@home message board.
[2025-03-23 00:46:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-23 00:46:30] Checking for apptainer binary...
[2025-03-23 00:46:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-23 00:46:30] Running /usr/bin/apptainer --version
[2025-03-23 00:46:30] apptainer version 1.3.6-1.el9
[2025-03-23 00:46:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-23 00:46:31] lc-10-9.aglt2.org
[2025-03-23 00:46:31] apptainer works
[2025-03-23 00:46:31] Set ATHENA_PROC_NUMBER=8
[2025-03-23 00:46:31] Set ATHENA_CORE_NUMBER=8
[2025-03-23 00:46:31] Starting ATLAS job with PandaID=6565702600
[2025-03-23 00:46:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-23 14:06:44]  *** The last 200 lines of the pilot log: ***
[2025-03-23 14:06:44] 2025-03-23 18:06:26,151 | INFO     | right removable region: 777
[2025-03-23 14:06:44] 2025-03-23 18:06:26,152 | INFO     | model: linear, x: [1742705687.0, 1742705748.0, 1742705809.0, 1742705870.0, 1742705932.0, 1742705993.0, 1742706053.0, 1742706114.0, 1742706175.0, 1742706237.0, 1742
[2025-03-23 14:06:44] 2025-03-23 18:06:26,152 | INFO     | sum of square deviations: 146019267490.4132
[2025-03-23 14:06:44] 2025-03-23 18:06:26,171 | INFO     | sum of deviations: 362601778764.30457
[2025-03-23 14:06:44] 2025-03-23 18:06:26,172 | INFO     | mean x: 1742729386.296915
[2025-03-23 14:06:44] 2025-03-23 18:06:26,173 | INFO     | mean y: 2158106.7519280207
[2025-03-23 14:06:44] 2025-03-23 18:06:26,173 | INFO     | -- intersect: -4325467871.905815
[2025-03-23 14:06:44] 2025-03-23 18:06:26,173 | INFO     | intersect: -4325467871.905815
[2025-03-23 14:06:44] 2025-03-23 18:06:26,174 | INFO     | chi2: 5.088732184665048
[2025-03-23 14:06:44] 2025-03-23 18:06:26,174 | INFO     | current chi2=5.088732184665048 (change=37.19388604442833 %)
[2025-03-23 14:06:44] 2025-03-23 18:06:26,175 | INFO     | model: linear, x: [1742705993.0, 1742706053.0, 1742706114.0, 1742706175.0, 1742706237.0, 1742706297.0, 1742706359.0, 1742706419.0, 1742706481.0, 1742706541.0, 1742
[2025-03-23 14:06:44] 2025-03-23 18:06:26,177 | INFO     | sum of square deviations: 143221854549.31964
[2025-03-23 14:06:44] 2025-03-23 18:06:26,193 | INFO     | sum of deviations: 222644666528.69897
[2025-03-23 14:06:44] 2025-03-23 18:06:26,194 | INFO     | mean x: 1742729538.8007762
[2025-03-23 14:06:44] 2025-03-23 18:06:26,194 | INFO     | mean y: 2165734.835705045
[2025-03-23 14:06:44] 2025-03-23 18:06:26,194 | INFO     | -- intersect: -2706983914.4058347
[2025-03-23 14:06:44] 2025-03-23 18:06:26,194 | INFO     | intersect: -2706983914.4058347
[2025-03-23 14:06:44] 2025-03-23 18:06:26,195 | INFO     | chi2: 3.5633099712257943
[2025-03-23 14:06:44] 2025-03-23 18:06:26,195 | INFO     | current chi2=3.5633099712257943 (change=29.976468756523104 %)
[2025-03-23 14:06:44] 2025-03-23 18:06:26,196 | INFO     | model: linear, x: [1742706297.0, 1742706359.0, 1742706419.0, 1742706481.0, 1742706541.0, 1742706602.0, 1742706665.0, 1742706724.0, 1742706785.0, 1742706847.0, 1742
[2025-03-23 14:06:44] 2025-03-23 18:06:26,196 | INFO     | sum of square deviations: 140460443168.3112
[2025-03-23 14:06:44] 2025-03-23 18:06:26,329 | INFO     | sum of deviations: 91835875721.69666
[2025-03-23 14:06:44] 2025-03-23 18:06:26,330 | INFO     | mean x: 1742729691.3033855
[2025-03-23 14:06:44] 2025-03-23 18:06:26,330 | INFO     | mean y: 2172958.0013020835
[2025-03-23 14:06:44] 2025-03-23 18:06:26,330 | INFO     | -- intersect: -1137258925.7160897
[2025-03-23 14:06:44] 2025-03-23 18:06:26,365 | INFO     | intersect: -1137258925.7160897
[2025-03-23 14:06:44] 2025-03-23 18:06:26,366 | INFO     | chi2: 2.2276799457736236
[2025-03-23 14:06:44] 2025-03-23 18:06:26,366 | INFO     | current chi2=2.2276799457736236 (change=37.48284702250329 %)
[2025-03-23 14:06:44] 2025-03-23 18:06:26,367 | INFO     | model: linear, x: [1742706602.0, 1742706665.0, 1742706724.0, 1742706785.0, 1742706847.0, 1742706908.0, 1742706968.0, 1742707029.0, 1742707091.0, 1742707151.0, 1742
[2025-03-23 14:06:44] 2025-03-23 18:06:26,416 | INFO     | sum of square deviations: 137734753387.29233
[2025-03-23 14:06:44] 2025-03-23 18:06:26,551 | INFO     | sum of deviations: 4898747306.124496
[2025-03-23 14:06:44] 2025-03-23 18:06:26,551 | INFO     | mean x: 1742729843.8060288
[2025-03-23 14:06:44] 2025-03-23 18:06:26,552 | INFO     | mean y: 2177817.885976409
[2025-03-23 14:06:44] 2025-03-23 18:06:26,552 | INFO     | -- intersect: -59805036.242654905
[2025-03-23 14:06:44] 2025-03-23 18:06:26,552 | INFO     | intersect: -59805036.242654905
[2025-03-23 14:06:44] 2025-03-23 18:06:26,575 | INFO     | chi2: 1.5964514402111996
[2025-03-23 14:06:44] 2025-03-23 18:06:26,575 | INFO     | current chi2=1.5964514402111996 (change=28.3356909846945 %)
[2025-03-23 14:06:44] 2025-03-23 18:06:26,576 | INFO     | model: linear, x: [1742706908.0, 1742706968.0, 1742707029.0, 1742707091.0, 1742707151.0, 1742707212.0, 1742707273.0, 1742707335.0, 1742707395.0, 1742707457.0, 1742
[2025-03-23 14:06:44] 2025-03-23 18:06:26,624 | INFO     | sum of square deviations: 135044599185.37894
[2025-03-23 14:06:44] 2025-03-23 18:06:26,725 | INFO     | sum of deviations: -45750549872.34293
[2025-03-23 14:06:44] 2025-03-23 18:06:26,726 | INFO     | mean x: 1742729996.3073878
[2025-03-23 14:06:44] 2025-03-23 18:06:26,726 | INFO     | mean y: 2180687.846965699
[2025-03-23 14:06:44] 2025-03-23 18:06:26,726 | INFO     | -- intersect: 592584569.9055196
[2025-03-23 14:06:44] 2025-03-23 18:06:26,726 | INFO     | intersect: 592584569.9055196
[2025-03-23 14:06:44] 2025-03-23 18:06:26,727 | INFO     | chi2: 1.3890545696058436
[2025-03-23 14:06:44] 2025-03-23 18:06:26,727 | INFO     | current chi2=1.3890545696058436 (change=12.991116759424811 %)
[2025-03-23 14:06:44] 2025-03-23 18:06:26,727 | INFO     | left removable region: 50
[2025-03-23 14:06:44] 2025-03-23 18:06:26,750 | INFO     | model: linear, x: [1742708434.0, 1742708496.0, 1742708555.0, 1742708615.0, 1742708677.0, 1742708742.0, 1742708804.0, 1742708860.0, 1742708921.0, 1742708984.0, 1742
[2025-03-23 14:06:44] 2025-03-23 18:06:26,751 | INFO     | sum of square deviations: 119144066026.4235
[2025-03-23 14:06:44] 2025-03-23 18:06:26,809 | INFO     | sum of deviations: -37047033467.05507
[2025-03-23 14:06:44] 2025-03-23 18:06:26,809 | INFO     | mean x: 1742730575.8088033
[2025-03-23 14:06:44] 2025-03-23 18:06:26,809 | INFO     | mean y: 2186299.258596974
[2025-03-23 14:06:44] 2025-03-23 18:06:26,809 | INFO     | -- intersect: 544076467.3491359
[2025-03-23 14:06:44] 2025-03-23 18:06:26,809 | INFO     | intersect: 544076467.3491359
[2025-03-23 14:06:44] 2025-03-23 18:06:26,810 | INFO     | chi2: 0.48132745945620714
[2025-03-23 14:06:44] 2025-03-23 18:06:26,811 | INFO     | -- intersect: 544076467.3491359
[2025-03-23 14:06:44] 2025-03-23 18:06:26,814 | INFO     | current memory leak: -0.31 B/s (using 727 data points, chi2=0.48)
[2025-03-23 14:06:44] 2025-03-23 18:06:26,815 | INFO     | ..............................
[2025-03-23 14:06:44] 2025-03-23 18:06:26,815 | INFO     | . Timing measurements:
[2025-03-23 14:06:44] 2025-03-23 18:06:26,815 | INFO     | . get job = 0 s
[2025-03-23 14:06:44] 2025-03-23 18:06:26,815 | INFO     | . initial setup = 5 s
[2025-03-23 14:06:44] 2025-03-23 18:06:26,815 | INFO     | . payload setup = 38 s
[2025-03-23 14:06:44] 2025-03-23 18:06:26,815 | INFO     | . stage-in = 0 s
[2025-03-23 14:06:44] 2025-03-23 18:06:26,816 | INFO     | . payload execution = 47789 s
[2025-03-23 14:06:44] 2025-03-23 18:06:26,816 | INFO     | . stage-out = 6 s
[2025-03-23 14:06:44] 2025-03-23 18:06:26,816 | INFO     | . log creation = 1 s
[2025-03-23 14:06:44] 2025-03-23 18:06:26,816 | INFO     | ..............................
[2025-03-23 14:06:44] 2025-03-23 18:06:27,748 | INFO     | 
[2025-03-23 14:06:44] 2025-03-23 18:06:27,748 | INFO     | job summary report
[2025-03-23 14:06:44] 2025-03-23 18:06:27,748 | INFO     | --------------------------------------------------
[2025-03-23 14:06:44] 2025-03-23 18:06:27,748 | INFO     | PanDA job id: 6565702600
[2025-03-23 14:06:44] 2025-03-23 18:06:27,748 | INFO     | task id: 43634914
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | errors: (none)
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | pilot state: finished 
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | transexitcode: 0
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | exeerrorcode: 0
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | exeerrordiag: 
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | exitcode: 0
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | exitmsg: OK
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | cpuconsumptiontime: 84198 s
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | nevents: 400
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | neventsw: 0
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | pid: 3107311
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | pgrp: 3107311
[2025-03-23 14:06:44] 2025-03-23 18:06:27,749 | INFO     | corecount: 8
[2025-03-23 14:06:44] 2025-03-23 18:06:27,750 | INFO     | event service: False
[2025-03-23 14:06:44] 2025-03-23 18:06:27,750 | INFO     | sizes: {0: 2408815, 1: 2408871, 2: 2408899, 3: 2409126, 14: 2409126, 26: 2409154, 33: 2409516, 36: 2409572, 47832: 2453950, 47840: 2462891, 47841: 2462947, 47878: 
[2025-03-23 14:06:44] 2025-03-23 18:06:27,750 | INFO     | --------------------------------------------------
[2025-03-23 14:06:44] 2025-03-23 18:06:27,750 | INFO     | 
[2025-03-23 14:06:44] 2025-03-23 18:06:27,750 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-03-23 14:06:44] 2025-03-23 18:06:27,849 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,850 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | job 6565702600 has completed (purged errors)
[2025-03-23 14:06:44] 2025-03-23 18:06:27,851 | INFO     | overall cleanup function is called
[2025-03-23 14:06:44] 2025-03-23 18:06:28,922 | INFO     | --- collectZombieJob: --- 10, [3107311]
[2025-03-23 14:06:44] 2025-03-23 18:06:28,922 | INFO     | zombie collector waiting for pid 3107311
[2025-03-23 14:06:44] 2025-03-23 18:06:28,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-23 14:06:44] 2025-03-23 18:06:28,922 | INFO     | collected zombie processes
[2025-03-23 14:06:44] 2025-03-23 18:06:28,922 | INFO     | will attempt to kill all subprocesses of pid=3107311
[2025-03-23 14:06:44] 2025-03-23 18:06:29,209 | INFO     | PID=3072266 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-03-23 14:06:44] 2025-03-23 18:06:29,210 | INFO     | .. there are 57 such processes running
[2025-03-23 14:06:44] 2025-03-23 18:06:29,457 | INFO     | process IDs to be killed: [3107311] (in reverse order)
[2025-03-23 14:06:44] 2025-03-23 18:06:30,242 | WARNING  | found no corresponding commands to process id(s)
[2025-03-23 14:06:44] 2025-03-23 18:06:30,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-23 14:06:44] 2025-03-23 18:06:30,352 | INFO     | did not find any defunct processes belonging to 3107311
[2025-03-23 14:06:44] 2025-03-23 18:06:30,501 | INFO     | did not find any defunct processes belonging to 3107311
[2025-03-23 14:06:44] 2025-03-23 18:06:30,501 | INFO     | ready for new job
[2025-03-23 14:06:44] 2025-03-23 18:06:30,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-23 14:06:44] 2025-03-23 18:06:30,525 | INFO     | ***************************************
[2025-03-23 14:06:44] 2025-03-23 18:06:30,525 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-03-23 14:06:44] 2025-03-23 18:06:30,525 | INFO     | ***************************************
[2025-03-23 14:06:44] 2025-03-23 18:06:30,525 | INFO     | 
[2025-03-23 14:06:44] 2025-03-23 18:06:30,570 | INFO     | architecture information:
[2025-03-23 14:06:44] 2025-03-23 18:06:30,581 | INFO     | executing command: cat /etc/os-release
[2025-03-23 14:06:44] 2025-03-23 18:06:30,649 | INFO     | cat /etc/os-release:
[2025-03-23 14:06:44] NAME="CentOS Linux"
[2025-03-23 14:06:44] VERSION="7 (Core)"
[2025-03-23 14:06:44] ID="centos"
[2025-03-23 14:06:44] ID_LIKE="rhel fedora"
[2025-03-23 14:06:44] VERSION_ID="7"
[2025-03-23 14:06:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-23 14:06:44] ANSI_COLOR="0;31"
[2025-03-23 14:06:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-23 14:06:44] HOME_URL="https://www.centos.org/"
[2025-03-23 14:06:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-23 14:06:44] 
[2025-03-23 14:06:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-23 14:06:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-23 14:06:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-23 14:06:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-23 14:06:44] 
[2025-03-23 14:06:44] 2025-03-23 18:06:30,649 | INFO     | ***************************************
[2025-03-23 14:06:44] 2025-03-23 18:06:31,153 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-03-23 14:06:44] 2025-03-23 18:06:31,259 | INFO     | sufficient remaining disk space (83665879040 B)
[2025-03-23 14:06:44] 2025-03-23 18:06:31,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-23 14:06:44] 2025-03-23 18:06:31,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-23 14:06:44] 2025-03-23 18:06:31,260 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-23 14:06:44] 2025-03-23 18:06:31,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-23 14:06:44] 2025-03-23 18:06:31,260 | INFO     | aborting loop
[2025-03-23 14:06:44] 2025-03-23 18:06:31,260 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-03-23 14:06:44] 2025-03-23 18:06:31,260 | INFO     | found 0 job(s) in 20 queues
[2025-03-23 14:06:44] 2025-03-23 18:06:31,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-23 14:06:44] 2025-03-23 18:06:31,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-23 14:06:44] 2025-03-23 18:06:31,783 | INFO     | all payload control threads have been joined
[2025-03-23 14:06:44] 2025-03-23 18:06:32,198 | INFO     | all data control threads have been joined
[2025-03-23 14:06:44] 2025-03-23 18:06:32,265 | INFO     | [job] retrieve thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:32,266 | INFO     | [job] job monitor thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:32,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-23 14:06:44] 2025-03-23 18:06:32,431 | INFO     | [payload] validate_post thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:32,478 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:32,478 | INFO     | [job] create_data_payload thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:32,484 | INFO     | [payload] execute_payloads thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:32,644 | INFO     | all job control threads have been joined
[2025-03-23 14:06:44] 2025-03-23 18:06:32,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-23 14:06:44] 2025-03-23 18:06:32,789 | INFO     | [payload] control thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:32,811 | INFO     | [job] validate thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:33,203 | INFO     | [data] control thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:33,267 | INFO     | [data] copytool_out thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:33,421 | INFO     | [payload] validate_pre thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:33,444 | INFO     | [data] copytool_in thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:33,654 | INFO     | [job] control thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:33,668 | INFO     | [payload] failed_post thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:33,792 | INFO     | [job] queue monitor thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:36,365 | INFO     | [data] queue_monitor thread has finished
[2025-03-23 14:06:44] 2025-03-23 18:06:37,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661311833920)>', '<ExcThread(monitor, started 139660407838464)>']
[2025-03-23 14:06:44] 2025-03-23 18:06:38,302 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-23 14:06:44] 2025-03-23 18:06:38,302 | INFO     | [monitor] control thread has ended
[2025-03-23 14:06:44] 2025-03-23 18:06:42,329 | INFO     | all workflow threads have been joined
[2025-03-23 14:06:44] 2025-03-23 18:06:42,329 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-23 14:06:44] 2025-03-23 18:06:42,329 | INFO     | traces error code: 0
[2025-03-23 14:06:44] 2025-03-23 18:06:42,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-23 14:06:44] 2025-03-23 18:06:43,088 [wrapper] ==== pilot stdout END ====
[2025-03-23 14:06:44] 2025-03-23 18:06:43,175 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-23 14:06:44] 2025-03-23 18:06:43,214 [wrapper] pilotpid: 3072266
[2025-03-23 14:06:44] 2025-03-23 18:06:43,259 [wrapper] Pilot exit status: 0
[2025-03-23 14:06:44] 2025-03-23 18:06:43,394 [wrapper] pandaids: 6565702600
[2025-03-23 14:06:44] 2025-03-23 18:06:43,550 [wrapper] cleanup supervisor_pilot 1083595 3072268
[2025-03-23 14:06:44] 2025-03-23 18:06:43,569 [wrapper] Test setup, not cleaning
[2025-03-23 14:06:44] 2025-03-23 18:06:43,583 [wrapper] apfmon messages muted
[2025-03-23 14:06:44] 2025-03-23 18:06:43,595 [wrapper] ==== wrapper stdout END ====
[2025-03-23 14:06:44] 2025-03-23 18:06:43,637 [wrapper] ==== wrapper stderr END ====
[2025-03-23 14:06:44]  *** Error codes and diagnostics ***
[2025-03-23 14:06:44]     "exeErrorCode": 0,
[2025-03-23 14:06:44]     "exeErrorDiag": "",
[2025-03-23 14:06:44]     "pilotErrorCode": 0,
[2025-03-23 14:06:44]     "pilotErrorDiag": "",
[2025-03-23 14:06:44]  *** Listing of results directory ***
[2025-03-23 14:06:44] total 689216
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas    494584 Mar 22 18:47 pilot3.tar.gz
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas      5112 Mar 22 19:31 queuedata.json
[2025-03-23 14:06:44] -rwx------. 1 boincer umatlas     37140 Mar 22 19:32 runpilot2-wrapper.sh
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas       100 Mar 23 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-23 14:06:44] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 23 00:46 run_atlas
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas       105 Mar 23 00:46 job.xml
[2025-03-23 14:06:44] -rw-r--r--. 2 boincer umatlas 360256748 Mar 23 00:46 EVNT.43634912._000799.pool.root.1
[2025-03-23 14:06:44] -rw-r--r--. 2 boincer umatlas     17571 Mar 23 00:46 start_atlas.sh
[2025-03-23 14:06:44] drwxrwx--x. 2 boincer umatlas      4096 Mar 23 00:46 shared
[2025-03-23 14:06:44] -rw-r--r--. 2 boincer umatlas    507269 Mar 23 00:46 input.tar.gz
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas         0 Mar 23 00:46 boinc_lockfile
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas      2628 Mar 23 00:46 pandaJob.out
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas       467 Mar 23 00:46 setup.sh.local
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas    993075 Mar 23 00:47 agis_schedconf.cvmfs.json
[2025-03-23 14:06:44] drwx------. 4 boincer umatlas      4096 Mar 23 00:47 pilot3
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas      6866 Mar 23 14:02 init_data.xml
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas 328262076 Mar 23 14:03 HITS.43634914._020330.pool.root.1
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas       532 Mar 23 14:04 boinc_task_state.xml
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas      1041 Mar 23 14:05 memory_monitor_summary.json
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas   1598879 Mar 23 14:05 agis_ddmendpoints.agis.ALL.json
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas    793065 Mar 23 14:05 log.43634914._020330.job.log.tgz.1
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas      7717 Mar 23 14:06 heartbeat.json
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas        95 Mar 23 14:06 pilot_heartbeat.json
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas      8192 Mar 23 14:06 boinc_mmap_file
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas        28 Mar 23 14:06 wrapper_checkpoint.txt
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas      4342 Mar 23 14:06 pilotlog.txt
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas   5905693 Mar 23 14:06 log.43634914._020330.job.log.1
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas       357 Mar 23 14:06 output.list
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas       620 Mar 23 14:06 runtime_log
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas   6717440 Mar 23 14:06 result.tar.gz
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas       657 Mar 23 14:06 TaeNDmEVNG7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmd29KDmJYHWGn.diag
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas     11415 Mar 23 14:06 runtime_log.err
[2025-03-23 14:06:44] -rw-r--r--. 1 boincer umatlas     21838 Mar 23 14:06 stderr.txt
[2025-03-23 14:06:44] HITS file was successfully produced:
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas 328262076 Mar 23 14:03 shared/HITS.pool.root.1
[2025-03-23 14:06:44]  *** Contents of shared directory: ***
[2025-03-23 14:06:44] total 679472
[2025-03-23 14:06:44] -rw-r--r--. 2 boincer umatlas 360256748 Mar 23 00:46 ATLAS.root_0
[2025-03-23 14:06:44] -rw-r--r--. 2 boincer umatlas     17571 Mar 23 00:46 start_atlas.sh
[2025-03-23 14:06:44] -rw-r--r--. 2 boincer umatlas    507269 Mar 23 00:46 input.tar.gz
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas 328262076 Mar 23 14:03 HITS.pool.root.1
[2025-03-23 14:06:44] -rw-------. 1 boincer umatlas   6717440 Mar 23 14:06 result.tar.gz
14:06:46 (3054643): run_atlas exited; CPU time 84568.734759
14:06:46 (3054643): called boinc_finish(0)

</stderr_txt>
]]>

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