Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-22 05:56:22 (641564): Detected: vboxwrapper 26206
2025-03-22 05:56:22 (641564): Detected: BOINC client v8.0.4
2025-03-22 05:56:23 (641564): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-03-22 05:56:23 (641564): Successfully copied 'init_data.xml' to the shared directory.
2025-03-22 05:56:23 (641564): Create VM. (boinc_bfec944b9c433aff, slot#1)
2025-03-22 05:56:23 (641564): Setting Memory Size for VM. (4300MB)
2025-03-22 05:56:23 (641564): Setting CPU Count for VM. (3)
2025-03-22 05:56:23 (641564): Setting Chipset Options for VM.
2025-03-22 05:56:23 (641564): Setting Graphics Controller Options for VM.
2025-03-22 05:56:23 (641564): Setting Boot Options for VM.
2025-03-22 05:56:23 (641564): Setting Network Configuration for NAT.
2025-03-22 05:56:23 (641564): Enabling VM Network Access.
2025-03-22 05:56:24 (641564): Disabling USB Support for VM.
2025-03-22 05:56:24 (641564): Disabling COM Port Support for VM.
2025-03-22 05:56:24 (641564): Disabling LPT Port Support for VM.
2025-03-22 05:56:24 (641564): Disabling Audio Support for VM.
2025-03-22 05:56:24 (641564): Disabling Clipboard Support for VM.
2025-03-22 05:56:24 (641564): Disabling Drag and Drop Support for VM.
2025-03-22 05:56:24 (641564): Adding storage controller(s) to VM.
2025-03-22 05:56:25 (641564): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-22 05:56:26 (641564): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-22 05:56:26 (641564): forwarding host port 48319 to guest port 80
2025-03-22 05:56:26 (641564): Enabling remote desktop for VM.
2025-03-22 05:56:26 (641564): Required extension pack not installed, remote desktop not enabled.
2025-03-22 05:56:26 (641564): Enabling shared directory for VM.
2025-03-22 05:56:27 (641564): Starting VM using VBoxManage interface. (boinc_bfec944b9c433aff, slot#1)
2025-03-22 05:56:28 (641564): Successfully started VM. (PID = '642044')
2025-03-22 05:56:28 (641564): Reporting VM Process ID to BOINC.
2025-03-22 05:56:28 (641564): Guest Log: BIOS: VirtualBox 7.0.20
2025-03-22 05:56:28 (641564): Guest Log: CPUID EDX: 0x178bfbff
2025-03-22 05:56:28 (641564): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-22 05:56:28 (641564): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-22 05:56:28 (641564): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-22 05:56:28 (641564): Detected: Web Application Enabled (http://localhost:48319)
2025-03-22 05:56:28 (641564): Preference change detected
2025-03-22 05:56:28 (641564): Setting CPU throttle for VM. (50%)
2025-03-22 05:56:28 (641564): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-22 05:56:30 (641564): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-22 05:56:30 (641564): Guest Log: BIOS: Booting from Hard Disk...
2025-03-22 05:56:34 (641564): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-22 05:56:34 (641564): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-22 05:56:34 (641564): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-22 05:56:43 (641564): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-22 05:56:43 (641564): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-22 05:57:04 (641564): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-22 05:57:04 (641564): Guest Log: 00:00:00.000246 main     Log opened 2025-03-21T20:57:03.785912000Z
2025-03-22 05:57:04 (641564): Guest Log: 00:00:00.000403 main     OS Product: Linux
2025-03-22 05:57:04 (641564): Guest Log: 00:00:00.000448 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-22 05:57:04 (641564): Guest Log: 00:00:00.000486 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-22 05:57:04 (641564): Guest Log: 00:00:00.000571 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-22 05:57:04 (641564): Guest Log: 00:00:00.000573 main     Process ID: 1293
2025-03-22 05:57:04 (641564): Guest Log: 00:00:00.000574 main     Package type: LINUX_64BITS_GENERIC
2025-03-22 05:57:04 (641564): Guest Log: 00:00:00.002643 main     5.2.32 r132073 started. Verbose level = 0
2025-03-22 05:57:04 (641564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-22 05:57:04 (641564): Guest Log: [INFO] Mounting shared directory
2025-03-22 05:57:04 (641564): Guest Log: [INFO] Checking for init_data.xml
2025-03-22 05:57:12 (641564): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-22 05:57:12 (641564): Guest Log: [INFO] Detected branch: prod
2025-03-22 05:57:12 (641564): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-22 05:57:12 (641564): Guest Log: Copying input files
2025-03-22 05:57:16 (641564): Guest Log: Copied input files into RunAtlas.
2025-03-22 05:57:16 (641564): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-22 05:57:16 (641564): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-22 05:57:16 (641564): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-22 05:57:16 (641564): Guest Log: Further information can be found at the LHC@home message board.
2025-03-22 05:57:29 (641564): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-22 05:57:30 (641564): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-22 05:57:30 (641564): Guest Log: 2.6.3.0 1568 0 32060 143969 3 1 3117320 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-22 05:57:32 (641564): Guest Log: copied the webapp to /var/www
2025-03-22 05:57:32 (641564): Guest Log: ATHENA_PROC_NUMBER=3
2025-03-22 05:57:32 (641564): Guest Log: ATHENA_CORE_NUMBER=3
2025-03-22 05:57:33 (641564): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-22 05:57:33 (641564): Guest Log:  *** Starting ATLAS job. (PandaID=6564481817 taskID=43558309) ***
2025-03-22 05:58:36 (641564): VM state change detected. (old = 'running', new = 'paused')
2025-03-22 05:58:56 (641564): VM state change detected. (old = 'paused', new = 'running')
2025-03-22 06:07:04 (641564): Guest Log:  *** Job finished ***
2025-03-22 06:07:04 (641564): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:32,625 | INFO     | [payload] control thread has finished
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:33,437 | INFO     | [job] queue monitor thread has finished
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:36,198 | INFO     | [data] queue_monitor thread has finished
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:36,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139723516323648)>', '<ExcThread(monitor, started 139722819081984)>']
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:36,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:36,984 | INFO     | [monitor] control thread has ended
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,216 | INFO     | all workflow threads have been joined
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,217 | INFO     | end of generic workflow (traces error code: 0)
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,218 | INFO     | traces error code: 0
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,382 [wrapper] ==== pilot stdout END ====
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,429 [wrapper] ==== wrapper stdout RESUME ====
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,440 [wrapper] pilotpid: 5883
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,451 [wrapper] Pilot exit status: 0
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,539 [wrapper] pandaids: 6564481817
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,656 [wrapper] cleanup supervisor_pilot  5889 5884
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,683 [wrapper] Test setup, not cleaning
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,732 [wrapper] apfmon messages muted
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,766 [wrapper] ==== wrapper stdout END ====
2025-03-22 06:07:04 (641564): Guest Log: 2025-03-21 21:06:41,791 [wrapper] ==== wrapper stderr END ====
2025-03-22 06:07:04 (641564): Guest Log:  *** Error codes and diagnostics ***
2025-03-22 06:07:04 (641564): Guest Log:     "exeErrorCode": 65,
2025-03-22 06:07:04 (641564): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-03-22 06:07:04 (641564): Guest Log:     "pilotErrorCode": 1305,
2025-03-22 06:07:04 (641564): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-03-22 06:07:04 (641564): Guest Log:  *** Listing of results directory ***
2025-03-22 06:07:04 (641564): Guest Log: total 3904
2025-03-22 06:07:04 (641564): Guest Log: -rw-r--r--. 1 atlas atlas  494584 Mar 21 08:20 pilot3.tar.gz
2025-03-22 06:07:04 (641564): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Mar 21 08:23 queuedata.json
2025-03-22 06:07:04 (641564): Guest Log: -rwx------. 1 atlas atlas   37212 Mar 21 08:27 runpilot2-wrapper.sh
2025-03-22 06:07:04 (641564): Guest Log: -rw-r--r--. 1 atlas atlas   17571 Mar 21 20:57 start_atlas.sh
2025-03-22 06:07:04 (641564): Guest Log: -rw-r--r--. 1 atlas atlas    6419 Mar 21 20:57 init_data.xml
2025-03-22 06:07:04 (641564): Guest Log: -rw-r--r--. 1 atlas atlas  507265 Mar 21 20:57 input.tar.gz
2025-03-22 06:07:04 (641564): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 21 20:57 EVNT.43558307._000021.pool.root.1 -> /data/./ATLAS.root_0
2025-03-22 06:07:04 (641564): Guest Log: -rw-r--r--. 1 atlas atlas    2599 Mar 21 20:57 pandaJob.out
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas     424 Mar 21 20:57 setup.sh.local
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas  993071 Mar 21 20:58 agis_schedconf.cvmfs.json
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas 1598879 Mar 21 20:58 agis_ddmendpoints.agis.ALL.json
2025-03-22 06:07:04 (641564): Guest Log: drwx------. 4 atlas atlas    4096 Mar 21 20:59 pilot3
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas    1007 Mar 21 21:04 memory_monitor_summary.json
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas   21986 Mar 21 21:04 log.43558309._000511.job.log.tgz.1
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas      95 Mar 21 21:06 pilot_heartbeat.json
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas    8398 Mar 21 21:06 heartbeat.json
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas    4402 Mar 21 21:06 pilotlog.txt
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas   90858 Mar 21 21:06 log.43558309._000511.job.log.1
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas     188 Mar 21 21:06 output.list
2025-03-22 06:07:04 (641564): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar 21 21:06 runtime_log
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas  133120 Mar 21 21:06 result.tar.gz
2025-03-22 06:07:04 (641564): Guest Log: -rw-r--r--. 1 atlas atlas   10789 Mar 21 21:06 runtime_log.err
2025-03-22 06:07:04 (641564): Guest Log: -rw-------. 1 atlas atlas     643 Mar 21 21:06 AQfKDmptmF7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm8n7KDm49DWQo.diag
2025-03-22 06:07:04 (641564): Guest Log: Looking for outputfile HITS.43558309._000511.pool.root.1
2025-03-22 06:07:04 (641564): Guest Log: No HITS file was produced
2025-03-22 06:07:04 (641564): Guest Log: Successfully finished the ATLAS job!
2025-03-22 06:07:04 (641564): Guest Log: Copying the results back to the shared directory!
2025-03-22 06:07:05 (641564): Guest Log:  *** Contents of shared directory: ***
2025-03-22 06:07:05 (641564): Guest Log: total 244580
2025-03-22 06:07:05 (641564): Guest Log: -rw-r--r--. 1 root root 249773593 Mar 21 20:56 ATLAS.root_0
2025-03-22 06:07:05 (641564): Guest Log: -rw-r--r--. 1 root root      6419 Mar 21 20:56 init_data.xml
2025-03-22 06:07:05 (641564): Guest Log: -rw-r--r--. 1 root root    507265 Mar 21 20:56 input.tar.gz
2025-03-22 06:07:05 (641564): Guest Log: -rw-r--r--. 1 root root    133120 Mar 21  2025 result.tar.gz
2025-03-22 06:07:05 (641564): Guest Log: -rw-r--r--. 1 root root     17571 Mar 21 20:56 start_atlas.sh
2025-03-22 06:07:05 (641564): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-22 06:07:05 (641564): VM Completion File Detected.
2025-03-22 06:07:05 (641564): Powering off VM.
2025-03-22 06:07:06 (641564): Successfully stopped VM.
2025-03-22 06:07:06 (641564): Deregistering VM. (boinc_bfec944b9c433aff, slot#1)
2025-03-22 06:07:06 (641564): Removing network bandwidth throttle group from VM.
2025-03-22 06:07:06 (641564): Removing VM from VirtualBox.
06:07:11 (641564): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN