Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-18 10:01:45 (1905824): Detected: vboxwrapper 26206
2025-03-18 10:01:45 (1905824): Detected: BOINC client v8.0.2
2025-03-18 10:01:46 (1905824): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-03-18 10:01:46 (1905824): Successfully copied 'init_data.xml' to the shared directory.
2025-03-18 10:01:46 (1905824): Create VM. (boinc_5aefa481ef1516de, slot#11)
2025-03-18 10:01:47 (1905824): Setting Memory Size for VM. (4800MB)
2025-03-18 10:01:47 (1905824): Setting CPU Count for VM. (8)
2025-03-18 10:01:47 (1905824): Setting Chipset Options for VM.
2025-03-18 10:01:48 (1905824): Setting Graphics Controller Options for VM.
2025-03-18 10:01:48 (1905824): Setting Boot Options for VM.
2025-03-18 10:01:48 (1905824): Setting Network Configuration for NAT.
2025-03-18 10:01:48 (1905824): Enabling VM Network Access.
2025-03-18 10:01:49 (1905824): Disabling USB Support for VM.
2025-03-18 10:01:49 (1905824): Disabling COM Port Support for VM.
2025-03-18 10:01:49 (1905824): Disabling LPT Port Support for VM.
2025-03-18 10:01:49 (1905824): Disabling Audio Support for VM.
2025-03-18 10:01:50 (1905824): Disabling Clipboard Support for VM.
2025-03-18 10:01:50 (1905824): Disabling Drag and Drop Support for VM.
2025-03-18 10:01:50 (1905824): Adding storage controller(s) to VM.
2025-03-18 10:01:50 (1905824): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-18 10:01:51 (1905824): Adding VirtualBox Guest Additions to VM.
2025-03-18 10:01:51 (1905824): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-18 10:01:51 (1905824): forwarding host port 56771 to guest port 80
2025-03-18 10:01:52 (1905824): Enabling remote desktop for VM.
2025-03-18 10:01:52 (1905824): Required extension pack not installed, remote desktop not enabled.
2025-03-18 10:01:52 (1905824): Enabling shared directory for VM.
2025-03-18 10:01:52 (1905824): Starting VM using VBoxManage interface. (boinc_5aefa481ef1516de, slot#11)
2025-03-18 10:01:58 (1905824): Successfully started VM. (PID = '1907512')
2025-03-18 10:01:58 (1905824): Reporting VM Process ID to BOINC.
2025-03-18 10:01:58 (1905824): Guest Log: BIOS: VirtualBox 7.1.6
2025-03-18 10:01:58 (1905824): Guest Log: CPUID EDX: 0x178bfbff
2025-03-18 10:01:58 (1905824): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-18 10:01:58 (1905824): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-18 10:01:58 (1905824): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-18 10:01:58 (1905824): Detected: Web Application Enabled (http://localhost:56771)
2025-03-18 10:01:58 (1905824): Preference change detected
2025-03-18 10:01:58 (1905824): Setting CPU throttle for VM. (50%)
2025-03-18 10:01:59 (1905824): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-18 10:02:00 (1905824): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-18 10:02:00 (1905824): Guest Log: BIOS: Booting from Hard Disk...
2025-03-18 10:02:03 (1905824): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-18 10:02:03 (1905824): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-18 10:02:03 (1905824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-18 10:02:12 (1905824): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-18 10:02:12 (1905824): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-18 10:02:18 (1905824): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-18 10:02:18 (1905824): Guest Log: 00:00:00.000122 main     Log opened 2025-03-18T10:02:17.336086000Z
2025-03-18 10:02:18 (1905824): Guest Log: 00:00:00.000201 main     OS Product: Linux
2025-03-18 10:02:18 (1905824): Guest Log: 00:00:00.000223 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-18 10:02:18 (1905824): Guest Log: 00:00:00.000239 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-18 10:02:18 (1905824): Guest Log: 00:00:00.000255 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-18 10:02:18 (1905824): Guest Log: 00:00:00.000255 main     Process ID: 1378
2025-03-18 10:02:18 (1905824): Guest Log: 00:00:00.000255 main     Package type: LINUX_64BITS_GENERIC
2025-03-18 10:02:18 (1905824): Guest Log: 00:00:00.001049 main     5.2.32 r132073 started. Verbose level = 0
2025-03-18 10:02:18 (1905824): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-18 10:02:18 (1905824): Guest Log: [INFO] Mounting shared directory
2025-03-18 10:02:18 (1905824): Guest Log: [INFO] Checking for init_data.xml
2025-03-18 10:02:28 (1905824): Guest Log: 00:00:10.004261 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 236 221 000ns (GuestNow=1 742 306 548 574 203 000 ns GuestLast=1 742 292 137 337 982 000 ns fSetTimeLastLoop=true )
2025-03-18 10:03:16 (1905824): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-18 10:03:16 (1905824): Guest Log: [INFO] Detected branch: prod
2025-03-18 10:03:17 (1905824): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-18 10:03:17 (1905824): Guest Log: Copying input files
2025-03-18 10:03:20 (1905824): Guest Log: Copied input files into RunAtlas.
2025-03-18 10:03:20 (1905824): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-18 10:03:20 (1905824): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-18 10:03:20 (1905824): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-18 10:03:20 (1905824): Guest Log: Further information can be found at the LHC@home message board.
2025-03-18 10:03:31 (1905824): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-18 10:03:32 (1905824): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-18 10:03:32 (1905824): Guest Log: 2.6.3.0 1681 0 32036 143830 4 1 3117320 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-18 10:03:32 (1905824): Guest Log: copied the webapp to /var/www
2025-03-18 10:03:32 (1905824): Guest Log: ATHENA_PROC_NUMBER=8
2025-03-18 10:03:32 (1905824): Guest Log: ATHENA_CORE_NUMBER=8
2025-03-18 10:03:33 (1905824): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-18 10:03:33 (1905824): Guest Log:  *** Starting ATLAS job. (PandaID=6561721235 taskID=43625736) ***
2025-03-18 11:42:04 (1905824): Status Report: Elapsed Time: '6000.522787'
2025-03-18 11:42:04 (1905824): Status Report: CPU Time: '17531.078125'
2025-03-18 13:22:09 (1905824): Status Report: Elapsed Time: '12000.522787'
2025-03-18 13:22:09 (1905824): Status Report: CPU Time: '46336.093750'
2025-03-18 15:02:16 (1905824): Status Report: Elapsed Time: '18000.522787'
2025-03-18 15:02:16 (1905824): Status Report: CPU Time: '75127.218750'
2025-03-18 15:29:26 (1905824): Guest Log:  *** Job finished ***
2025-03-18 15:29:26 (1905824): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:18,313 | INFO     | [data] copytool_out thread has finished
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:18,825 | INFO     | [job] queue monitor thread has finished
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:19,460 | INFO     | [data] queue_monitor thread has finished
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:20,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050741262144)>', '<ExcThread(monitor, started 140050075473664)>']
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:20,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:20,843 | INFO     | [monitor] control thread has ended
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,111 | INFO     | all workflow threads have been joined
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,112 | INFO     | end of generic workflow (traces error code: 0)
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,112 | INFO     | traces error code: 0
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,178 [wrapper] ==== pilot stdout END ====
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,182 [wrapper] ==== wrapper stdout RESUME ====
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,186 [wrapper] pilotpid: 6129
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,190 [wrapper] Pilot exit status: 0
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,402 [wrapper] pandaids: 6561721235
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,440 [wrapper] cleanup supervisor_pilot 19548 6130
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,447 [wrapper] Test setup, not cleaning
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,455 [wrapper] apfmon messages muted
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,460 [wrapper] ==== wrapper stdout END ====
2025-03-18 15:29:26 (1905824): Guest Log: 2025-03-18 19:29:25,464 [wrapper] ==== wrapper stderr END ====
2025-03-18 15:29:26 (1905824): Guest Log:  *** Error codes and diagnostics ***
2025-03-18 15:29:26 (1905824): Guest Log:     "exeErrorCode": 0,
2025-03-18 15:29:26 (1905824): Guest Log:     "exeErrorDiag": "",
2025-03-18 15:29:26 (1905824): Guest Log:     "pilotErrorCode": 0,
2025-03-18 15:29:26 (1905824): Guest Log:     "pilotErrorDiag": "",
2025-03-18 15:29:26 (1905824): Guest Log:  *** Listing of results directory ***
2025-03-18 15:29:26 (1905824): Guest Log: total 175912
2025-03-18 15:29:26 (1905824): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 18 04:19 pilot3.tar.gz
2025-03-18 15:29:26 (1905824): Guest Log: -rw-r--r--. 1 atlas atlas      5119 Mar 18 04:58 queuedata.json
2025-03-18 15:29:26 (1905824): Guest Log: -rwx------. 1 atlas atlas     35865 Mar 18 04:59 runpilot2-wrapper.sh
2025-03-18 15:29:26 (1905824): Guest Log: -rwxr-xr-x. 1 atlas atlas      9397 Mar 18 14:03 init_data.xml
2025-03-18 15:29:26 (1905824): Guest Log: -rwxr-xr-x. 1 atlas atlas    507025 Mar 18 14:03 input.tar.gz
2025-03-18 15:29:26 (1905824): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Mar 18 14:03 start_atlas.sh
2025-03-18 15:29:26 (1905824): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 18 14:03 EVNT.43625734._000009.pool.root.1 -> /data/./ATLAS.root_0
2025-03-18 15:29:26 (1905824): Guest Log: -rw-r--r--. 1 atlas atlas      2523 Mar 18 14:03 pandaJob.out
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas       424 Mar 18 14:05 setup.sh.local
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas    994323 Mar 18 14:11 agis_schedconf.cvmfs.json
2025-03-18 15:29:26 (1905824): Guest Log: drwx------. 4 atlas atlas      4096 Mar 18 14:11 pilot3
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas 173012941 Mar 18 19:28 HITS.43625736._000077.pool.root.1
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas      1037 Mar 18 19:28 memory_monitor_summary.json
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas   1589469 Mar 18 19:28 agis_ddmendpoints.agis.ALL.json
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas    381837 Mar 18 19:28 log.43625736._000077.job.log.tgz.1
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas        95 Mar 18 19:28 pilot_heartbeat.json
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas      7711 Mar 18 19:29 heartbeat.json
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas      4465 Mar 18 19:29 pilotlog.txt
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas   1296738 Mar 18 19:29 log.43625736._000077.job.log.1
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas       357 Mar 18 19:29 output.list
2025-03-18 15:29:26 (1905824): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 18 19:29 runtime_log
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas   1699840 Mar 18 19:29 result.tar.gz
2025-03-18 15:29:26 (1905824): Guest Log: -rw-r--r--. 1 atlas atlas     10939 Mar 18 19:29 runtime_log.err
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas       662 Mar 18 19:29 7L7KDmEEeE7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmdh2KDmUVcPVm.diag
2025-03-18 15:29:26 (1905824): Guest Log: Looking for outputfile HITS.43625736._000077.pool.root.1
2025-03-18 15:29:26 (1905824): Guest Log: HITS file was successfully produced
2025-03-18 15:29:26 (1905824): Guest Log: -rw-------. 1 atlas atlas 173012941 Mar 18 19:28 /home/atlas/RunAtlas/HITS.43625736._000077.pool.root.1
2025-03-18 15:29:27 (1905824): Guest Log: Successfully finished the ATLAS job!
2025-03-18 15:29:27 (1905824): Guest Log: Copying the results back to the shared directory!
2025-03-18 15:29:27 (1905824): Guest Log:  *** Contents of shared directory: ***
2025-03-18 15:29:27 (1905824): Guest Log: total 463196
2025-03-18 15:29:27 (1905824): Guest Log: -rwxrwxrwx. 1 root root 299055032 Mar 18 14:01 ATLAS.root_0
2025-03-18 15:29:27 (1905824): Guest Log: -rwxrwxrwx. 1 root root 173012941 Mar 18 19:29 HITS.pool.root.1
2025-03-18 15:29:27 (1905824): Guest Log: -rwxrwxrwx. 1 root root      9397 Mar 18 14:01 init_data.xml
2025-03-18 15:29:27 (1905824): Guest Log: -rwxrwxrwx. 1 root root    507025 Mar 18 13:59 input.tar.gz
2025-03-18 15:29:27 (1905824): Guest Log: -rwxrwxrwx. 1 root root   1699840 Mar 18 19:29 result.tar.gz
2025-03-18 15:29:27 (1905824): Guest Log: -rwxrwxrwx. 1 root root     17571 Mar 18 13:59 start_atlas.sh
2025-03-18 15:29:27 (1905824): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-18 15:29:27 (1905824): VM Completion File Detected.
2025-03-18 15:29:27 (1905824): Powering off VM.
2025-03-18 15:29:28 (1905824): Successfully stopped VM.
2025-03-18 15:29:28 (1905824): Deregistering VM. (boinc_5aefa481ef1516de, slot#11)
2025-03-18 15:29:28 (1905824): Removing network bandwidth throttle group from VM.
2025-03-18 15:29:28 (1905824): Removing VM from VirtualBox.
15:29:33 (1905824): called boinc_finish(0)

</stderr_txt>
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