Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-18 04:18:27 (1793984): Detected: vboxwrapper 26206
2025-03-18 04:18:27 (1793984): Detected: BOINC client v8.0.2
2025-03-18 04:18:27 (1793984): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-03-18 04:18:28 (1793984): Successfully copied 'init_data.xml' to the shared directory.
2025-03-18 04:18:28 (1793984): Create VM. (boinc_cf0f22601e950777, slot#11)
2025-03-18 04:18:29 (1793984): Setting Memory Size for VM. (4800MB)
2025-03-18 04:18:29 (1793984): Setting CPU Count for VM. (8)
2025-03-18 04:18:29 (1793984): Setting Chipset Options for VM.
2025-03-18 04:18:29 (1793984): Setting Graphics Controller Options for VM.
2025-03-18 04:18:30 (1793984): Setting Boot Options for VM.
2025-03-18 04:18:30 (1793984): Setting Network Configuration for NAT.
2025-03-18 04:18:30 (1793984): Enabling VM Network Access.
2025-03-18 04:18:30 (1793984): Disabling USB Support for VM.
2025-03-18 04:18:31 (1793984): Disabling COM Port Support for VM.
2025-03-18 04:18:31 (1793984): Disabling LPT Port Support for VM.
2025-03-18 04:18:31 (1793984): Disabling Audio Support for VM.
2025-03-18 04:18:31 (1793984): Disabling Clipboard Support for VM.
2025-03-18 04:18:32 (1793984): Disabling Drag and Drop Support for VM.
2025-03-18 04:18:32 (1793984): Adding storage controller(s) to VM.
2025-03-18 04:18:32 (1793984): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-18 04:18:33 (1793984): Adding VirtualBox Guest Additions to VM.
2025-03-18 04:18:33 (1793984): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-18 04:18:33 (1793984): forwarding host port 53972 to guest port 80
2025-03-18 04:18:33 (1793984): Enabling remote desktop for VM.
2025-03-18 04:18:34 (1793984): Required extension pack not installed, remote desktop not enabled.
2025-03-18 04:18:34 (1793984): Enabling shared directory for VM.
2025-03-18 04:18:34 (1793984): Starting VM using VBoxManage interface. (boinc_cf0f22601e950777, slot#11)
2025-03-18 04:18:40 (1793984): Successfully started VM. (PID = '1794200')
2025-03-18 04:18:40 (1793984): Reporting VM Process ID to BOINC.
2025-03-18 04:18:40 (1793984): Guest Log: BIOS: VirtualBox 7.1.6
2025-03-18 04:18:40 (1793984): Guest Log: CPUID EDX: 0x178bfbff
2025-03-18 04:18:40 (1793984): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-18 04:18:40 (1793984): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-18 04:18:40 (1793984): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-18 04:18:40 (1793984): Detected: Web Application Enabled (http://localhost:53972)
2025-03-18 04:18:40 (1793984): Preference change detected
2025-03-18 04:18:40 (1793984): Setting CPU throttle for VM. (50%)
2025-03-18 04:18:40 (1793984): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-18 04:18:42 (1793984): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-18 04:18:42 (1793984): Guest Log: BIOS: Booting from Hard Disk...
2025-03-18 04:18:45 (1793984): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-18 04:18:45 (1793984): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-18 04:18:45 (1793984): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-18 04:18:54 (1793984): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-18 04:18:54 (1793984): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-18 04:19:00 (1793984): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-18 04:19:00 (1793984): Guest Log: 00:00:00.000153 main     Log opened 2025-03-18T04:18:59.046306000Z
2025-03-18 04:19:00 (1793984): Guest Log: 00:00:00.000243 main     OS Product: Linux
2025-03-18 04:19:00 (1793984): Guest Log: 00:00:00.000272 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-18 04:19:00 (1793984): Guest Log: 00:00:00.000290 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-18 04:19:00 (1793984): Guest Log: 00:00:00.000306 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-18 04:19:00 (1793984): Guest Log: 00:00:00.000307 main     Process ID: 1377
2025-03-18 04:19:00 (1793984): Guest Log: 00:00:00.000307 main     Package type: LINUX_64BITS_GENERIC
2025-03-18 04:19:00 (1793984): Guest Log: 00:00:00.000920 main     5.2.32 r132073 started. Verbose level = 0
2025-03-18 04:19:00 (1793984): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-18 04:19:00 (1793984): Guest Log: [INFO] Mounting shared directory
2025-03-18 04:19:00 (1793984): Guest Log: [INFO] Checking for init_data.xml
2025-03-18 04:19:10 (1793984): Guest Log: 00:00:10.002658 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 355 451 000ns (GuestNow=1 742 285 950 403 611 000 ns GuestLast=1 742 271 539 048 160 000 ns fSetTimeLastLoop=true )
2025-03-18 04:20:04 (1793984): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-18 04:20:04 (1793984): Guest Log: [INFO] Detected branch: prod
2025-03-18 04:20:04 (1793984): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-18 04:20:04 (1793984): Guest Log: Copying input files
2025-03-18 04:20:07 (1793984): Guest Log: Copied input files into RunAtlas.
2025-03-18 04:20:07 (1793984): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-18 04:20:07 (1793984): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-18 04:20:07 (1793984): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-18 04:20:07 (1793984): Guest Log: Further information can be found at the LHC@home message board.
2025-03-18 04:20:19 (1793984): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-18 04:20:19 (1793984): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-18 04:20:19 (1793984): Guest Log: 2.6.3.0 1698 0 32180 143821 4 1 3117320 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-18 04:20:20 (1793984): Guest Log: copied the webapp to /var/www
2025-03-18 04:20:20 (1793984): Guest Log: ATHENA_PROC_NUMBER=8
2025-03-18 04:20:20 (1793984): Guest Log: ATHENA_CORE_NUMBER=8
2025-03-18 04:20:20 (1793984): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-18 04:20:20 (1793984): Guest Log:  *** Starting ATLAS job. (PandaID=6561824687 taskID=43625696) ***
2025-03-18 05:58:45 (1793984): Status Report: Elapsed Time: '6000.000000'
2025-03-18 05:58:45 (1793984): Status Report: CPU Time: '21178.453125'
2025-03-18 07:38:50 (1793984): Status Report: Elapsed Time: '12000.000000'
2025-03-18 07:38:50 (1793984): Status Report: CPU Time: '49988.031250'
2025-03-18 08:25:12 (1793984): Guest Log:  *** Job finished ***
2025-03-18 08:25:12 (1793984): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:24:59,656 | INFO     | [data] queue_monitor thread has finished
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:04,297 | INFO     | job.realtimelogging is not enabled
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:05,298 | INFO     | [payload] run_realtimelog thread has finished
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:06,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140061738436416)>', '<ExcThread(monitor, started 140061156828928)>']
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:07,368 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:07,368 | INFO     | [monitor] control thread has ended
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,505 | INFO     | all workflow threads have been joined
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,506 | INFO     | end of generic workflow (traces error code: 0)
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,506 | INFO     | traces error code: 0
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,562 [wrapper] ==== pilot stdout END ====
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,565 [wrapper] ==== wrapper stdout RESUME ====
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,568 [wrapper] pilotpid: 6070
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,572 [wrapper] Pilot exit status: 0
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,811 [wrapper] pandaids: 6561824687
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,837 [wrapper] cleanup supervisor_pilot 12984 6071
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,840 [wrapper] Test setup, not cleaning
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,847 [wrapper] apfmon messages muted
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,851 [wrapper] ==== wrapper stdout END ====
2025-03-18 08:25:12 (1793984): Guest Log: 2025-03-18 12:25:11,854 [wrapper] ==== wrapper stderr END ====
2025-03-18 08:25:12 (1793984): Guest Log:  *** Error codes and diagnostics ***
2025-03-18 08:25:12 (1793984): Guest Log:     "exeErrorCode": 0,
2025-03-18 08:25:12 (1793984): Guest Log:     "exeErrorDiag": "",
2025-03-18 08:25:12 (1793984): Guest Log:     "pilotErrorCode": 0,
2025-03-18 08:25:12 (1793984): Guest Log:     "pilotErrorDiag": "",
2025-03-18 08:25:12 (1793984): Guest Log:  *** Listing of results directory ***
2025-03-18 08:25:12 (1793984): Guest Log: total 173000
2025-03-18 08:25:12 (1793984): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 18 06:11 pilot3.tar.gz
2025-03-18 08:25:12 (1793984): Guest Log: -rw-r--r--. 1 atlas atlas      5119 Mar 18 06:54 queuedata.json
2025-03-18 08:25:12 (1793984): Guest Log: -rwx------. 1 atlas atlas     35865 Mar 18 06:55 runpilot2-wrapper.sh
2025-03-18 08:25:12 (1793984): Guest Log: -rwxr-xr-x. 1 atlas atlas      9397 Mar 18 08:20 init_data.xml
2025-03-18 08:25:12 (1793984): Guest Log: -rwxr-xr-x. 1 atlas atlas    507032 Mar 18 08:20 input.tar.gz
2025-03-18 08:25:12 (1793984): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Mar 18 08:20 start_atlas.sh
2025-03-18 08:25:12 (1793984): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 18 08:20 EVNT.43625694._000006.pool.root.1 -> /data/./ATLAS.root_0
2025-03-18 08:25:12 (1793984): Guest Log: -rw-r--r--. 1 atlas atlas      2521 Mar 18 08:20 pandaJob.out
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas       424 Mar 18 08:20 setup.sh.local
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas    994291 Mar 18 08:23 agis_schedconf.cvmfs.json
2025-03-18 08:25:12 (1793984): Guest Log: drwx------. 4 atlas atlas      4096 Mar 18 08:23 pilot3
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas 170856145 Mar 18 12:24 HITS.43625696._000144.pool.root.1
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas        95 Mar 18 12:24 pilot_heartbeat.json
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas      1040 Mar 18 12:24 memory_monitor_summary.json
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas   1589745 Mar 18 12:24 agis_ddmendpoints.agis.ALL.json
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas    366110 Mar 18 12:24 log.43625696._000144.job.log.tgz.1
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas      7717 Mar 18 12:24 heartbeat.json
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas      4537 Mar 18 12:25 pilotlog.txt
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas    900219 Mar 18 12:25 log.43625696._000144.job.log.1
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas       357 Mar 18 12:25 output.list
2025-03-18 08:25:12 (1793984): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 18 12:25 runtime_log
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas   1290240 Mar 18 12:25 result.tar.gz
2025-03-18 08:25:12 (1793984): Guest Log: -rw-r--r--. 1 atlas atlas     10939 Mar 18 12:25 runtime_log.err
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas       662 Mar 18 12:25 8XFMDmC2fE7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmMykKDmyUwsQo.diag
2025-03-18 08:25:12 (1793984): Guest Log: Looking for outputfile HITS.43625696._000144.pool.root.1
2025-03-18 08:25:12 (1793984): Guest Log: HITS file was successfully produced
2025-03-18 08:25:12 (1793984): Guest Log: -rw-------. 1 atlas atlas 170856145 Mar 18 12:24 /home/atlas/RunAtlas/HITS.43625696._000144.pool.root.1
2025-03-18 08:25:13 (1793984): Guest Log: Successfully finished the ATLAS job!
2025-03-18 08:25:13 (1793984): Guest Log: Copying the results back to the shared directory!
2025-03-18 08:25:14 (1793984): Guest Log:  *** Contents of shared directory: ***
2025-03-18 08:25:14 (1793984): Guest Log: total 477308
2025-03-18 08:25:14 (1793984): Guest Log: -rwxrwxrwx. 1 root root 316074434 Mar 18 08:18 ATLAS.root_0
2025-03-18 08:25:14 (1793984): Guest Log: -rwxrwxrwx. 1 root root 170856145 Mar 18 12:25 HITS.pool.root.1
2025-03-18 08:25:14 (1793984): Guest Log: -rwxrwxrwx. 1 root root      9397 Mar 18 08:18 init_data.xml
2025-03-18 08:25:14 (1793984): Guest Log: -rwxrwxrwx. 1 root root    507032 Mar 18 07:57 input.tar.gz
2025-03-18 08:25:14 (1793984): Guest Log: -rwxrwxrwx. 1 root root   1290240 Mar 18 12:25 result.tar.gz
2025-03-18 08:25:14 (1793984): Guest Log: -rwxrwxrwx. 1 root root     17571 Mar 18 07:57 start_atlas.sh
2025-03-18 08:25:14 (1793984): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-18 08:25:14 (1793984): VM Completion File Detected.
2025-03-18 08:25:14 (1793984): Powering off VM.
2025-03-18 08:25:15 (1793984): Successfully stopped VM.
2025-03-18 08:25:15 (1793984): Deregistering VM. (boinc_cf0f22601e950777, slot#11)
2025-03-18 08:25:15 (1793984): Removing network bandwidth throttle group from VM.
2025-03-18 08:25:15 (1793984): Removing VM from VirtualBox.
08:25:20 (1793984): called boinc_finish(0)

</stderr_txt>
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