Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-13 08:14:46 (3172): Detected: vboxwrapper 26206
2025-03-13 08:14:46 (3172): Detected: BOINC client v8.0.4
2025-03-13 08:14:46 (3172): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-03-13 08:14:47 (3172): Successfully copied 'init_data.xml' to the shared directory.
2025-03-13 08:14:47 (3172): Create VM. (boinc_2aa826ce1230eb88, slot#11)
2025-03-13 08:14:48 (3172): Setting Memory Size for VM. (4400MB)
2025-03-13 08:14:48 (3172): Setting CPU Count for VM. (4)
2025-03-13 08:14:48 (3172): Setting Chipset Options for VM.
2025-03-13 08:14:49 (3172): Setting Graphics Controller Options for VM.
2025-03-13 08:14:49 (3172): Setting Boot Options for VM.
2025-03-13 08:14:49 (3172): Setting Network Configuration for NAT.
2025-03-13 08:14:49 (3172): Enabling VM Network Access.
2025-03-13 08:14:50 (3172): Disabling USB Support for VM.
2025-03-13 08:14:50 (3172): Disabling COM Port Support for VM.
2025-03-13 08:14:50 (3172): Disabling LPT Port Support for VM.
2025-03-13 08:14:50 (3172): Disabling Audio Support for VM.
2025-03-13 08:14:51 (3172): Disabling Clipboard Support for VM.
2025-03-13 08:14:51 (3172): Disabling Drag and Drop Support for VM.
2025-03-13 08:14:51 (3172): Adding storage controller(s) to VM.
2025-03-13 08:14:51 (3172): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-13 08:14:54 (3172): Adding VirtualBox Guest Additions to VM.
2025-03-13 08:14:55 (3172): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-13 08:14:55 (3172): forwarding host port 57398 to guest port 80
2025-03-13 08:14:55 (3172): Enabling remote desktop for VM.
2025-03-13 08:14:55 (3172): Required extension pack not installed, remote desktop not enabled.
2025-03-13 08:14:55 (3172): Enabling shared directory for VM.
2025-03-13 08:14:56 (3172): Starting VM using VBoxManage interface. (boinc_2aa826ce1230eb88, slot#11)
2025-03-13 08:15:01 (3172): Successfully started VM. (PID = '17700')
2025-03-13 08:15:01 (3172): Reporting VM Process ID to BOINC.
2025-03-13 08:15:01 (3172): Guest Log: BIOS: VirtualBox 7.1.4
2025-03-13 08:15:01 (3172): Guest Log: CPUID EDX: 0x178bfbff
2025-03-13 08:15:01 (3172): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-13 08:15:01 (3172): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-13 08:15:01 (3172): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-13 08:15:01 (3172): Detected: Web Application Enabled (http://localhost:57398)
2025-03-13 08:15:01 (3172): Preference change detected
2025-03-13 08:15:01 (3172): Setting CPU throttle for VM. (100%)
2025-03-13 08:15:01 (3172): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-13 08:15:03 (3172): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-13 08:15:03 (3172): Guest Log: BIOS: Booting from Hard Disk...
2025-03-13 08:15:06 (3172): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-13 08:15:06 (3172): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-13 08:15:06 (3172): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-13 08:15:15 (3172): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-13 08:15:15 (3172): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-13 08:15:26 (3172): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-13 08:15:26 (3172): Guest Log: 00:00:00.000194 main     Log opened 2025-03-13T08:15:25.303029000Z
2025-03-13 08:15:26 (3172): Guest Log: 00:00:00.000261 main     OS Product: Linux
2025-03-13 08:15:26 (3172): Guest Log: 00:00:00.000286 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-13 08:15:26 (3172): Guest Log: 00:00:00.000310 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-13 08:15:26 (3172): Guest Log: 00:00:00.000343 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-13 08:15:26 (3172): Guest Log: 00:00:00.000344 main     Process ID: 1310
2025-03-13 08:15:26 (3172): Guest Log: 00:00:00.000344 main     Package type: LINUX_64BITS_GENERIC
2025-03-13 08:15:26 (3172): Guest Log: 00:00:00.011971 main     5.2.32 r132073 started. Verbose level = 0
2025-03-13 08:15:27 (3172): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-13 08:15:27 (3172): Guest Log: [INFO] Mounting shared directory
2025-03-13 08:15:27 (3172): Guest Log: [INFO] Checking for init_data.xml
2025-03-13 08:15:30 (3172): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-13 08:15:30 (3172): Guest Log: [INFO] Detected branch: prod
2025-03-13 08:15:30 (3172): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-13 08:15:30 (3172): Guest Log: Copying input files
2025-03-13 08:15:32 (3172): Guest Log: Copied input files into RunAtlas.
2025-03-13 08:15:32 (3172): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-13 08:15:32 (3172): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-13 08:15:32 (3172): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-13 08:15:32 (3172): Guest Log: Further information can be found at the LHC@home message board.
2025-03-13 08:15:36 (3172): Guest Log: 00:00:10.025972 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 180 017 000ns (GuestNow=1 741 878 936 500 942 000 ns GuestLast=1 741 853 725 320 925 000 ns fSetTimeLastLoop=true )
2025-03-13 08:15:40 (3172): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-13 08:15:41 (3172): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-13 08:15:41 (3172): Guest Log: 2.6.3.0 1588 0 30136 143645 4 1 3117319 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-03-13 08:15:42 (3172): Guest Log: copied the webapp to /var/www
2025-03-13 08:15:42 (3172): Guest Log: ATHENA_PROC_NUMBER=4
2025-03-13 08:15:42 (3172): Guest Log: ATHENA_CORE_NUMBER=4
2025-03-13 08:15:43 (3172): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-13 08:15:43 (3172): Guest Log:  *** Starting ATLAS job. (PandaID=6555546906 taskID=43625249) ***
2025-03-13 09:55:07 (3172): Status Report: Elapsed Time: '6000.000000'
2025-03-13 09:55:07 (3172): Status Report: CPU Time: '16330.984375'
2025-03-13 11:35:27 (3172): Status Report: Elapsed Time: '12000.000000'
2025-03-13 11:35:27 (3172): Status Report: CPU Time: '38138.500000'
2025-03-13 12:38:20 (3172): Guest Log:  *** Job finished ***
2025-03-13 12:38:20 (3172): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:02,831 | INFO     | [job] control thread has finished
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:03,250 | INFO     | [data] copytool_out thread has finished
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:04,239 | INFO     | [data] queue_monitor thread has finished
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:05,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140534884849472)>', '<ExcThread(monitor, started 140534031030016)>']
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:06,313 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:06,314 | INFO     | [monitor] control thread has ended
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:10,329 | INFO     | all workflow threads have been joined
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:10,329 | INFO     | end of generic workflow (traces error code: 0)
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:10,329 | INFO     | traces error code: 0
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:10,330 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:10,700 [wrapper] ==== pilot stdout END ====
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:10,703 [wrapper] ==== wrapper stdout RESUME ====
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:10,716 [wrapper] pilotpid: 5922
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:10,719 [wrapper] Pilot exit status: 0
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:11,548 [wrapper] pandaids: 6555546906
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:11,668 [wrapper] cleanup supervisor_pilot 18617 5923
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:11,671 [wrapper] Test setup, not cleaning
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:11,678 [wrapper] apfmon messages muted
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:11,681 [wrapper] ==== wrapper stdout END ====
2025-03-13 12:38:21 (3172): Guest Log: 2025-03-13 19:38:11,685 [wrapper] ==== wrapper stderr END ====
2025-03-13 12:38:21 (3172): Guest Log:  *** Error codes and diagnostics ***
2025-03-13 12:38:21 (3172): Guest Log:     "exeErrorCode": 0,
2025-03-13 12:38:21 (3172): Guest Log:     "exeErrorDiag": "",
2025-03-13 12:38:21 (3172): Guest Log:     "pilotErrorCode": 0,
2025-03-13 12:38:21 (3172): Guest Log:     "pilotErrorDiag": "",
2025-03-13 12:38:21 (3172): Guest Log:  *** Listing of results directory ***
2025-03-13 12:38:21 (3172): Guest Log: total 168956
2025-03-13 12:38:21 (3172): Guest Log: -rw-r--r--. 1 atlas atlas      5119 Mar 13 14:57 queuedata.json
2025-03-13 12:38:21 (3172): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 13 14:58 pilot3.tar.gz
2025-03-13 12:38:21 (3172): Guest Log: -rwx------. 1 atlas atlas     35865 Mar 13 14:58 runpilot2-wrapper.sh
2025-03-13 12:38:21 (3172): Guest Log: -rwxr-xr-x. 1 atlas atlas      9295 Mar 13 15:15 init_data.xml
2025-03-13 12:38:21 (3172): Guest Log: -rwxr-xr-x. 1 atlas atlas    507030 Mar 13 15:15 input.tar.gz
2025-03-13 12:38:21 (3172): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Mar 13 15:15 start_atlas.sh
2025-03-13 12:38:21 (3172): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 13 15:15 EVNT.43625245._000007.pool.root.1 -> /data/./ATLAS.root_0
2025-03-13 12:38:21 (3172): Guest Log: -rw-r--r--. 1 atlas atlas      2514 Mar 13 15:15 pandaJob.out
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas       424 Mar 13 15:15 setup.sh.local
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas    996424 Mar 13 15:16 agis_schedconf.cvmfs.json
2025-03-13 12:38:21 (3172): Guest Log: drwx------. 4 atlas atlas      4096 Mar 13 15:16 pilot3
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas 165821365 Mar 13 19:37 HITS.43625249._000111.pool.root.1
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas        95 Mar 13 19:37 pilot_heartbeat.json
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas      1028 Mar 13 19:37 memory_monitor_summary.json
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas   1589745 Mar 13 19:37 agis_ddmendpoints.agis.ALL.json
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas    337543 Mar 13 19:37 log.43625249._000111.job.log.tgz.1
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas      7672 Mar 13 19:37 heartbeat.json
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas      4279 Mar 13 19:38 pilotlog.txt
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas   1378889 Mar 13 19:38 log.43625249._000111.job.log.1
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas       357 Mar 13 19:38 output.list
2025-03-13 12:38:21 (3172): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 13 19:38 runtime_log
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas   1730560 Mar 13 19:38 result.tar.gz
2025-03-13 12:38:21 (3172): Guest Log: -rw-r--r--. 1 atlas atlas     10927 Mar 13 19:38 runtime_log.err
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas       657 Mar 13 19:38 DyBODmmBzC7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmLtjKDmBXTovn.diag
2025-03-13 12:38:21 (3172): Guest Log: Looking for outputfile HITS.43625249._000111.pool.root.1
2025-03-13 12:38:21 (3172): Guest Log: HITS file was successfully produced
2025-03-13 12:38:21 (3172): Guest Log: -rw-------. 1 atlas atlas 165821365 Mar 13 19:37 /home/atlas/RunAtlas/HITS.43625249._000111.pool.root.1
2025-03-13 12:38:22 (3172): Guest Log: Successfully finished the ATLAS job!
2025-03-13 12:38:22 (3172): Guest Log: Copying the results back to the shared directory!
2025-03-13 12:38:22 (3172): Guest Log:  *** Contents of shared directory: ***
2025-03-13 12:38:22 (3172): Guest Log: total 479292
2025-03-13 12:38:22 (3172): Guest Log: -rwxrwxrwx. 1 root root 322697142 Mar 13 15:14 ATLAS.root_0
2025-03-13 12:38:22 (3172): Guest Log: -rwxrwxrwx. 1 root root 165821365 Mar 13  2025 HITS.pool.root.1
2025-03-13 12:38:22 (3172): Guest Log: -rwxrwxrwx. 1 root root      9295 Mar 13 15:14 init_data.xml
2025-03-13 12:38:22 (3172): Guest Log: -rwxrwxrwx. 1 root root    507030 Mar 13 15:13 input.tar.gz
2025-03-13 12:38:22 (3172): Guest Log: -rwxrwxrwx. 1 root root   1730560 Mar 13  2025 result.tar.gz
2025-03-13 12:38:22 (3172): Guest Log: -rwxrwxrwx. 1 root root     17571 Mar 13 15:13 start_atlas.sh
2025-03-13 12:38:22 (3172): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-13 12:38:22 (3172): VM Completion File Detected.
2025-03-13 12:38:22 (3172): Powering off VM.
2025-03-13 12:38:22 (3172): Successfully stopped VM.
2025-03-13 12:38:22 (3172): Deregistering VM. (boinc_2aa826ce1230eb88, slot#11)
2025-03-13 12:38:22 (3172): Removing network bandwidth throttle group from VM.
2025-03-13 12:38:22 (3172): Removing VM from VirtualBox.
12:38:28 (3172): called boinc_finish(0)

</stderr_txt>
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