Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-14 02:53:53 (3544): Detected: vboxwrapper 26206
2025-03-14 02:53:53 (3544): Detected: BOINC client v7.16.20
2025-03-14 02:53:54 (3544): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-03-14 02:53:54 (3544): Successfully copied 'init_data.xml' to the shared directory.
2025-03-14 02:53:55 (3544): Create VM. (boinc_001b64a0bb801751, slot#6)
2025-03-14 02:53:55 (3544): Setting Memory Size for VM. (4800MB)
2025-03-14 02:53:55 (3544): Setting CPU Count for VM. (8)
2025-03-14 02:53:56 (3544): Setting Chipset Options for VM.
2025-03-14 02:53:56 (3544): Setting Graphics Controller Options for VM.
2025-03-14 02:53:56 (3544): Setting Boot Options for VM.
2025-03-14 02:53:56 (3544): Setting Network Configuration for NAT.
2025-03-14 02:53:57 (3544): Enabling VM Network Access.
2025-03-14 02:53:57 (3544): Disabling USB Support for VM.
2025-03-14 02:53:57 (3544): Disabling COM Port Support for VM.
2025-03-14 02:53:57 (3544): Disabling LPT Port Support for VM.
2025-03-14 02:53:58 (3544): Disabling Audio Support for VM.
2025-03-14 02:53:58 (3544): Disabling Clipboard Support for VM.
2025-03-14 02:53:58 (3544): Disabling Drag and Drop Support for VM.
2025-03-14 02:53:58 (3544): Adding storage controller(s) to VM.
2025-03-14 02:53:59 (3544): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-14 02:53:59 (3544): Adding VirtualBox Guest Additions to VM.
2025-03-14 02:53:59 (3544): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-14 02:54:00 (3544): forwarding host port 64012 to guest port 80
2025-03-14 02:54:00 (3544): Enabling remote desktop for VM.
2025-03-14 02:54:00 (3544): Required extension pack not installed, remote desktop not enabled.
2025-03-14 02:54:00 (3544): Enabling shared directory for VM.
2025-03-14 02:54:01 (3544): Starting VM using VBoxManage interface. (boinc_001b64a0bb801751, slot#6)
2025-03-14 02:54:05 (3544): Successfully started VM. (PID = '2592')
2025-03-14 02:54:05 (3544): Reporting VM Process ID to BOINC.
2025-03-14 02:54:05 (3544): Guest Log: BIOS: VirtualBox 6.1.50
2025-03-14 02:54:05 (3544): Guest Log: CPUID EDX: 0x178bfbff
2025-03-14 02:54:05 (3544): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-14 02:54:05 (3544): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-14 02:54:05 (3544): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-14 02:54:05 (3544): Detected: Web Application Enabled (http://localhost:64012)
2025-03-14 02:54:05 (3544): Preference change detected
2025-03-14 02:54:05 (3544): Setting CPU throttle for VM. (100%)
2025-03-14 02:54:05 (3544): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-14 02:54:07 (3544): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-14 02:54:07 (3544): Guest Log: BIOS: Booting from Hard Disk...
2025-03-14 02:54:10 (3544): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-14 02:54:10 (3544): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-14 02:54:10 (3544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-14 02:54:15 (3544): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-14 02:54:15 (3544): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-14 02:54:20 (3544): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-14 02:54:20 (3544): Guest Log: 00:00:00.000109 main     Log opened 2025-03-14T02:54:18.182452000Z
2025-03-14 02:54:20 (3544): Guest Log: 00:00:00.000179 main     OS Product: Linux
2025-03-14 02:54:20 (3544): Guest Log: 00:00:00.000198 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-14 02:54:20 (3544): Guest Log: 00:00:00.000214 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-14 02:54:20 (3544): Guest Log: 00:00:00.000229 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-14 02:54:20 (3544): Guest Log: 00:00:00.000229 main     Process ID: 1363
2025-03-14 02:54:20 (3544): Guest Log: 00:00:00.000229 main     Package type: LINUX_64BITS_GENERIC
2025-03-14 02:54:20 (3544): Guest Log: 00:00:00.000996 main     5.2.32 r132073 started. Verbose level = 0
2025-03-14 02:54:20 (3544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-14 02:54:20 (3544): Guest Log: [INFO] Mounting shared directory
2025-03-14 02:54:20 (3544): Guest Log: [INFO] Checking for init_data.xml
2025-03-14 02:54:22 (3544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-14 02:54:22 (3544): Guest Log: [INFO] Detected branch: prod
2025-03-14 02:54:22 (3544): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-14 02:54:22 (3544): Guest Log: Copying input files
2025-03-14 02:54:24 (3544): Guest Log: Copied input files into RunAtlas.
2025-03-14 02:54:24 (3544): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-14 02:54:24 (3544): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-14 02:54:24 (3544): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-14 02:54:24 (3544): Guest Log: Further information can be found at the LHC@home message board.
2025-03-14 02:54:30 (3544): Guest Log: 00:00:10.002404 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 373 979 000ns (GuestNow=1 741 917 269 810 329 000 ns GuestLast=1 741 920 858 184 308 000 ns fSetTimeLastLoop=true )
2025-03-14 02:54:32 (3544): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-14 02:54:32 (3544): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-14 02:54:32 (3544): Guest Log: 2.6.3.0 1639 0 30188 143664 4 1 3117319 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-14 02:54:33 (3544): Guest Log: copied the webapp to /var/www
2025-03-14 02:54:33 (3544): Guest Log: ATHENA_PROC_NUMBER=8
2025-03-14 02:54:33 (3544): Guest Log: ATHENA_CORE_NUMBER=8
2025-03-14 02:54:33 (3544): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-14 02:54:33 (3544): Guest Log:  *** Starting ATLAS job. (PandaID=6555228521 taskID=43625418) ***
2025-03-14 04:34:18 (3544): Status Report: Elapsed Time: '6000.000000'
2025-03-14 04:34:18 (3544): Status Report: CPU Time: '40699.796875'
2025-03-14 06:01:38 (3544): Guest Log:  *** Job finished ***
2025-03-14 06:01:38 (3544): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:24,997 | INFO     | [payload] validate_post thread has finished
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:25,144 | INFO     | [payload] validate_pre thread has finished
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:26,884 | INFO     | [data] queue_monitor thread has finished
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:27,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140436142954304)>', '<ExcThread(monitor, started 140434886092544)>']
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:27,786 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:27,786 | INFO     | [monitor] control thread has ended
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,440 | INFO     | all workflow threads have been joined
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,440 | INFO     | end of generic workflow (traces error code: 0)
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,440 | INFO     | traces error code: 0
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,513 [wrapper] ==== pilot stdout END ====
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,517 [wrapper] ==== wrapper stdout RESUME ====
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,520 [wrapper] pilotpid: 5984
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,523 [wrapper] Pilot exit status: 0
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,609 [wrapper] pandaids: 6555228521
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,637 [wrapper] cleanup supervisor_pilot 11680 5985
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,642 [wrapper] Test setup, not cleaning
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,652 [wrapper] apfmon messages muted
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,657 [wrapper] ==== wrapper stdout END ====
2025-03-14 06:01:38 (3544): Guest Log: 2025-03-14 05:01:32,661 [wrapper] ==== wrapper stderr END ====
2025-03-14 06:01:38 (3544): Guest Log:  *** Error codes and diagnostics ***
2025-03-14 06:01:38 (3544): Guest Log:     "exeErrorCode": 0,
2025-03-14 06:01:38 (3544): Guest Log:     "exeErrorDiag": "",
2025-03-14 06:01:38 (3544): Guest Log:     "pilotErrorCode": 0,
2025-03-14 06:01:38 (3544): Guest Log:     "pilotErrorDiag": "",
2025-03-14 06:01:38 (3544): Guest Log:  *** Listing of results directory ***
2025-03-14 06:01:38 (3544): Guest Log: total 176584
2025-03-14 06:01:38 (3544): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 13 09:16 pilot3.tar.gz
2025-03-14 06:01:38 (3544): Guest Log: -rw-r--r--. 1 atlas atlas      5119 Mar 13 09:19 queuedata.json
2025-03-14 06:01:38 (3544): Guest Log: -rwx------. 1 atlas atlas     35865 Mar 13 09:21 runpilot2-wrapper.sh
2025-03-14 06:01:38 (3544): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Mar 14 01:54 start_atlas.sh
2025-03-14 06:01:38 (3544): Guest Log: -rwxr-xr-x. 1 atlas atlas    507043 Mar 14 01:54 input.tar.gz
2025-03-14 06:01:38 (3544): Guest Log: -rwxr-xr-x. 1 atlas atlas      6152 Mar 14 01:54 init_data.xml
2025-03-14 06:01:38 (3544): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 14 01:54 EVNT.43625414._000040.pool.root.1 -> /data/./ATLAS.root_0
2025-03-14 06:01:38 (3544): Guest Log: -rw-r--r--. 1 atlas atlas      2551 Mar 14 01:54 pandaJob.out
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas       424 Mar 14 01:54 setup.sh.local
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas    994577 Mar 14 01:55 agis_schedconf.cvmfs.json
2025-03-14 06:01:38 (3544): Guest Log: drwx------. 4 atlas atlas      4096 Mar 14 01:55 pilot3
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas 174449596 Mar 14 05:00 HITS.43625418._000991.pool.root.1
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas        95 Mar 14 05:00 pilot_heartbeat.json
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas      1041 Mar 14 05:01 memory_monitor_summary.json
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas   1589745 Mar 14 05:01 agis_ddmendpoints.agis.ALL.json
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas    360161 Mar 14 05:01 log.43625418._000991.job.log.tgz.1
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas      7705 Mar 14 05:01 heartbeat.json
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas      4465 Mar 14 05:01 pilotlog.txt
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas    947295 Mar 14 05:01 log.43625418._000991.job.log.1
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas       357 Mar 14 05:01 output.list
2025-03-14 06:01:38 (3544): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 14 05:01 runtime_log
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas   1331200 Mar 14 05:01 result.tar.gz
2025-03-14 06:01:38 (3544): Guest Log: -rw-r--r--. 1 atlas atlas     10937 Mar 14 05:01 runtime_log.err
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas       656 Mar 14 05:01 cApNDmpvtC7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgD1KDmnByifm.diag
2025-03-14 06:01:38 (3544): Guest Log: Looking for outputfile HITS.43625418._000991.pool.root.1
2025-03-14 06:01:38 (3544): Guest Log: HITS file was successfully produced
2025-03-14 06:01:38 (3544): Guest Log: -rw-------. 1 atlas atlas 174449596 Mar 14 05:00 /home/atlas/RunAtlas/HITS.43625418._000991.pool.root.1
2025-03-14 06:01:39 (3544): Guest Log: Successfully finished the ATLAS job!
2025-03-14 06:01:39 (3544): Guest Log: Copying the results back to the shared directory!
2025-03-14 06:01:39 (3544): Guest Log:  *** Contents of shared directory: ***
2025-03-14 06:01:39 (3544): Guest Log: total 478568
2025-03-14 06:01:39 (3544): Guest Log: -rwxrwxrwx. 1 root root 313729696 Mar 14 01:53 ATLAS.root_0
2025-03-14 06:01:39 (3544): Guest Log: -rwxrwxrwx. 1 root root 174449596 Mar 14  2025 HITS.pool.root.1
2025-03-14 06:01:39 (3544): Guest Log: -rwxrwxrwx. 1 root root      6152 Mar 14 01:53 init_data.xml
2025-03-14 06:01:39 (3544): Guest Log: -rwxrwxrwx. 1 root root    507043 Mar 13 09:21 input.tar.gz
2025-03-14 06:01:39 (3544): Guest Log: -rwxrwxrwx. 1 root root   1331200 Mar 14  2025 result.tar.gz
2025-03-14 06:01:39 (3544): Guest Log: -rwxrwxrwx. 1 root root     17571 Mar 13 09:21 start_atlas.sh
2025-03-14 06:01:39 (3544): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-14 06:01:39 (3544): VM Completion File Detected.
2025-03-14 06:01:39 (3544): Powering off VM.
2025-03-14 06:01:40 (3544): Successfully stopped VM.
2025-03-14 06:01:40 (3544): Deregistering VM. (boinc_001b64a0bb801751, slot#6)
2025-03-14 06:01:40 (3544): Removing network bandwidth throttle group from VM.
2025-03-14 06:01:40 (3544): Removing VM from VirtualBox.
06:01:45 (3544): called boinc_finish(0)

</stderr_txt>
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