Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-14 01:54:17 (3008): Detected: vboxwrapper 26206
2025-03-14 01:54:17 (3008): Detected: BOINC client v7.16.20
2025-03-14 01:54:18 (3008): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-03-14 01:54:18 (3008): Successfully copied 'init_data.xml' to the shared directory.
2025-03-14 01:54:19 (3008): Create VM. (boinc_b5ff29ea488b41c0, slot#7)
2025-03-14 01:54:19 (3008): Setting Memory Size for VM. (4800MB)
2025-03-14 01:54:19 (3008): Setting CPU Count for VM. (8)
2025-03-14 01:54:20 (3008): Setting Chipset Options for VM.
2025-03-14 01:54:20 (3008): Setting Graphics Controller Options for VM.
2025-03-14 01:54:20 (3008): Setting Boot Options for VM.
2025-03-14 01:54:20 (3008): Setting Network Configuration for NAT.
2025-03-14 01:54:21 (3008): Enabling VM Network Access.
2025-03-14 01:54:21 (3008): Disabling USB Support for VM.
2025-03-14 01:54:21 (3008): Disabling COM Port Support for VM.
2025-03-14 01:54:21 (3008): Disabling LPT Port Support for VM.
2025-03-14 01:54:22 (3008): Disabling Audio Support for VM.
2025-03-14 01:54:22 (3008): Disabling Clipboard Support for VM.
2025-03-14 01:54:22 (3008): Disabling Drag and Drop Support for VM.
2025-03-14 01:54:22 (3008): Adding storage controller(s) to VM.
2025-03-14 01:54:23 (3008): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-14 01:54:23 (3008): Adding VirtualBox Guest Additions to VM.
2025-03-14 01:54:24 (3008): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-14 01:54:24 (3008): forwarding host port 63252 to guest port 80
2025-03-14 01:54:24 (3008): Enabling remote desktop for VM.
2025-03-14 01:54:24 (3008): Required extension pack not installed, remote desktop not enabled.
2025-03-14 01:54:24 (3008): Enabling shared directory for VM.
2025-03-14 01:54:25 (3008): Starting VM using VBoxManage interface. (boinc_b5ff29ea488b41c0, slot#7)
2025-03-14 01:54:29 (3008): Successfully started VM. (PID = '2132')
2025-03-14 01:54:29 (3008): Reporting VM Process ID to BOINC.
2025-03-14 01:54:29 (3008): Guest Log: BIOS: VirtualBox 6.1.50
2025-03-14 01:54:29 (3008): Guest Log: CPUID EDX: 0x178bfbff
2025-03-14 01:54:29 (3008): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-14 01:54:29 (3008): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-14 01:54:29 (3008): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-14 01:54:29 (3008): Detected: Web Application Enabled (http://localhost:63252)
2025-03-14 01:54:29 (3008): Preference change detected
2025-03-14 01:54:29 (3008): Setting CPU throttle for VM. (100%)
2025-03-14 01:54:29 (3008): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-14 01:54:31 (3008): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-14 01:54:31 (3008): Guest Log: BIOS: Booting from Hard Disk...
2025-03-14 01:54:34 (3008): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-14 01:54:34 (3008): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-14 01:54:34 (3008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-14 01:54:41 (3008): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-14 01:54:41 (3008): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-14 01:54:47 (3008): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-14 01:54:47 (3008): Guest Log: 00:00:00.000113 main     Log opened 2025-03-14T01:54:45.307958000Z
2025-03-14 01:54:47 (3008): Guest Log: 00:00:00.000188 main     OS Product: Linux
2025-03-14 01:54:47 (3008): Guest Log: 00:00:00.000207 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-14 01:54:47 (3008): Guest Log: 00:00:00.000222 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-14 01:54:47 (3008): Guest Log: 00:00:00.000237 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-14 01:54:47 (3008): Guest Log: 00:00:00.000238 main     Process ID: 1365
2025-03-14 01:54:47 (3008): Guest Log: 00:00:00.000238 main     Package type: LINUX_64BITS_GENERIC
2025-03-14 01:54:47 (3008): Guest Log: 00:00:00.000691 main     5.2.32 r132073 started. Verbose level = 0
2025-03-14 01:54:47 (3008): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-14 01:54:47 (3008): Guest Log: [INFO] Mounting shared directory
2025-03-14 01:54:47 (3008): Guest Log: [INFO] Checking for init_data.xml
2025-03-14 01:54:49 (3008): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-14 01:54:49 (3008): Guest Log: [INFO] Detected branch: prod
2025-03-14 01:54:49 (3008): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-14 01:54:49 (3008): Guest Log: Copying input files
2025-03-14 01:54:50 (3008): Guest Log: Copied input files into RunAtlas.
2025-03-14 01:54:50 (3008): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-14 01:54:50 (3008): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-14 01:54:50 (3008): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-14 01:54:50 (3008): Guest Log: Further information can be found at the LHC@home message board.
2025-03-14 01:54:57 (3008): Guest Log: 00:00:10.004956 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 938 823 000ns (GuestNow=1 741 913 696 370 465 000 ns GuestLast=1 741 917 285 309 288 000 ns fSetTimeLastLoop=true )
2025-03-14 01:54:59 (3008): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-14 01:54:59 (3008): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-14 01:54:59 (3008): Guest Log: 2.6.3.0 1641 0 30172 143663 4 1 3117319 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-03-14 01:55:00 (3008): Guest Log: copied the webapp to /var/www
2025-03-14 01:55:00 (3008): Guest Log: ATHENA_PROC_NUMBER=8
2025-03-14 01:55:00 (3008): Guest Log: ATHENA_CORE_NUMBER=8
2025-03-14 01:55:00 (3008): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-14 01:55:00 (3008): Guest Log:  *** Starting ATLAS job. (PandaID=6554947232 taskID=43625193) ***
2025-03-14 03:10:17 (3008): Guest Log:  *** Job finished ***
2025-03-14 03:10:17 (3008): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:06,076 | INFO     | [job] control thread has finished
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:06,111 | INFO     | [payload] control thread has finished
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:08,032 | INFO     | [data] queue_monitor thread has finished
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:09,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648500016960)>', '<ExcThread(monitor, started 139647640401664)>']
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:10,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:10,184 | INFO     | [monitor] control thread has ended
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,688 | INFO     | all workflow threads have been joined
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,688 | INFO     | end of generic workflow (traces error code: 0)
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,688 | INFO     | traces error code: 0
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,688 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,760 [wrapper] ==== pilot stdout END ====
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,763 [wrapper] ==== wrapper stdout RESUME ====
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,767 [wrapper] pilotpid: 6001
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,771 [wrapper] Pilot exit status: 0
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,843 [wrapper] pandaids: 6554947232
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,870 [wrapper] cleanup supervisor_pilot 31463 6002
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,875 [wrapper] Test setup, not cleaning
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,885 [wrapper] apfmon messages muted
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,888 [wrapper] ==== wrapper stdout END ====
2025-03-14 03:10:17 (3008): Guest Log: 2025-03-14 02:10:14,891 [wrapper] ==== wrapper stderr END ====
2025-03-14 03:10:17 (3008): Guest Log:  *** Error codes and diagnostics ***
2025-03-14 03:10:17 (3008): Guest Log:     "exeErrorCode": 0,
2025-03-14 03:10:17 (3008): Guest Log:     "exeErrorDiag": "",
2025-03-14 03:10:17 (3008): Guest Log:     "pilotErrorCode": 0,
2025-03-14 03:10:17 (3008): Guest Log:     "pilotErrorDiag": "",
2025-03-14 03:10:17 (3008): Guest Log:  *** Listing of results directory ***
2025-03-14 03:10:17 (3008): Guest Log: total 166120
2025-03-14 03:10:17 (3008): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 13 04:32 pilot3.tar.gz
2025-03-14 03:10:17 (3008): Guest Log: -rw-r--r--. 1 atlas atlas      5119 Mar 13 04:39 queuedata.json
2025-03-14 03:10:17 (3008): Guest Log: -rwx------. 1 atlas atlas     35865 Mar 13 04:39 runpilot2-wrapper.sh
2025-03-14 03:10:17 (3008): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Mar 14 00:54 start_atlas.sh
2025-03-14 03:10:17 (3008): Guest Log: -rwxr-xr-x. 1 atlas atlas    507030 Mar 14 00:54 input.tar.gz
2025-03-14 03:10:17 (3008): Guest Log: -rwxr-xr-x. 1 atlas atlas      6152 Mar 14 00:54 init_data.xml
2025-03-14 03:10:17 (3008): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 14 00:54 EVNT.43625189._000023.pool.root.1 -> /data/./ATLAS.root_0
2025-03-14 03:10:17 (3008): Guest Log: -rw-r--r--. 1 atlas atlas      2504 Mar 14 00:54 pandaJob.out
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas       424 Mar 14 00:55 setup.sh.local
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas    994585 Mar 14 00:55 agis_schedconf.cvmfs.json
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas   1589745 Mar 14 00:55 agis_ddmendpoints.agis.ALL.json
2025-03-14 03:10:17 (3008): Guest Log: drwx------. 4 atlas atlas      4096 Mar 14 00:55 pilot3
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas 164976814 Mar 14 02:09 HITS.43625193._000575.pool.root.1
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas        95 Mar 14 02:09 pilot_heartbeat.json
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas      1027 Mar 14 02:09 memory_monitor_summary.json
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas    308896 Mar 14 02:09 log.43625193._000575.job.log.tgz.1
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas      7703 Mar 14 02:10 heartbeat.json
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas      4402 Mar 14 02:10 pilotlog.txt
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas    379028 Mar 14 02:10 log.43625193._000575.job.log.1
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas       357 Mar 14 02:10 output.list
2025-03-14 03:10:17 (3008): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 14 02:10 runtime_log
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas    706560 Mar 14 02:10 result.tar.gz
2025-03-14 03:10:17 (3008): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Mar 14 02:10 runtime_log.err
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas       652 Mar 14 02:10 IBoKDmQXpC7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmy80KDm2PDMkm.diag
2025-03-14 03:10:17 (3008): Guest Log: Looking for outputfile HITS.43625193._000575.pool.root.1
2025-03-14 03:10:17 (3008): Guest Log: HITS file was successfully produced
2025-03-14 03:10:17 (3008): Guest Log: -rw-------. 1 atlas atlas 164976814 Mar 14 02:09 /home/atlas/RunAtlas/HITS.43625193._000575.pool.root.1
2025-03-14 03:10:18 (3008): Guest Log: Successfully finished the ATLAS job!
2025-03-14 03:10:18 (3008): Guest Log: Copying the results back to the shared directory!
2025-03-14 03:10:18 (3008): Guest Log:  *** Contents of shared directory: ***
2025-03-14 03:10:18 (3008): Guest Log: total 464044
2025-03-14 03:10:18 (3008): Guest Log: -rwxrwxrwx. 1 root root 308953396 Mar 14 00:54 ATLAS.root_0
2025-03-14 03:10:18 (3008): Guest Log: -rwxrwxrwx. 1 root root 164976814 Mar 14  2025 HITS.pool.root.1
2025-03-14 03:10:18 (3008): Guest Log: -rwxrwxrwx. 1 root root      6152 Mar 14 00:54 init_data.xml
2025-03-14 03:10:18 (3008): Guest Log: -rwxrwxrwx. 1 root root    507030 Mar 13 08:26 input.tar.gz
2025-03-14 03:10:18 (3008): Guest Log: -rwxrwxrwx. 1 root root    706560 Mar 14  2025 result.tar.gz
2025-03-14 03:10:18 (3008): Guest Log: -rwxrwxrwx. 1 root root     17571 Mar 13 08:26 start_atlas.sh
2025-03-14 03:10:18 (3008): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-14 03:10:18 (3008): VM Completion File Detected.
2025-03-14 03:10:18 (3008): Powering off VM.
2025-03-14 03:10:19 (3008): Successfully stopped VM.
2025-03-14 03:10:19 (3008): Deregistering VM. (boinc_b5ff29ea488b41c0, slot#7)
2025-03-14 03:10:19 (3008): Removing network bandwidth throttle group from VM.
2025-03-14 03:10:19 (3008): Removing VM from VirtualBox.
03:10:24 (3008): called boinc_finish(0)

</stderr_txt>
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