Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-14 02:11:50 (4124): Detected: vboxwrapper 26206
2025-03-14 02:11:50 (4124): Detected: BOINC client v7.16.20
2025-03-14 02:11:51 (4124): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-03-14 02:11:51 (4124): Successfully copied 'init_data.xml' to the shared directory.
2025-03-14 02:11:52 (4124): Create VM. (boinc_c8ff44353567c0db, slot#6)
2025-03-14 02:11:52 (4124): Setting Memory Size for VM. (4800MB)
2025-03-14 02:11:52 (4124): Setting CPU Count for VM. (8)
2025-03-14 02:11:53 (4124): Setting Chipset Options for VM.
2025-03-14 02:11:53 (4124): Setting Graphics Controller Options for VM.
2025-03-14 02:11:53 (4124): Setting Boot Options for VM.
2025-03-14 02:11:53 (4124): Setting Network Configuration for NAT.
2025-03-14 02:11:54 (4124): Enabling VM Network Access.
2025-03-14 02:11:54 (4124): Disabling USB Support for VM.
2025-03-14 02:11:54 (4124): Disabling COM Port Support for VM.
2025-03-14 02:11:54 (4124): Disabling LPT Port Support for VM.
2025-03-14 02:11:55 (4124): Disabling Audio Support for VM.
2025-03-14 02:11:55 (4124): Disabling Clipboard Support for VM.
2025-03-14 02:11:55 (4124): Disabling Drag and Drop Support for VM.
2025-03-14 02:11:55 (4124): Adding storage controller(s) to VM.
2025-03-14 02:11:56 (4124): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-14 02:11:56 (4124): Adding VirtualBox Guest Additions to VM.
2025-03-14 02:11:56 (4124): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-14 02:11:57 (4124): forwarding host port 62565 to guest port 80
2025-03-14 02:11:57 (4124): Enabling remote desktop for VM.
2025-03-14 02:11:57 (4124): Required extension pack not installed, remote desktop not enabled.
2025-03-14 02:11:57 (4124): Enabling shared directory for VM.
2025-03-14 02:11:58 (4124): Starting VM using VBoxManage interface. (boinc_c8ff44353567c0db, slot#6)
2025-03-14 02:12:01 (4124): Successfully started VM. (PID = '11884')
2025-03-14 02:12:01 (4124): Reporting VM Process ID to BOINC.
2025-03-14 02:12:01 (4124): Guest Log: BIOS: VirtualBox 6.1.50
2025-03-14 02:12:01 (4124): Guest Log: CPUID EDX: 0x178bfbff
2025-03-14 02:12:01 (4124): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-14 02:12:01 (4124): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-14 02:12:01 (4124): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-14 02:12:01 (4124): Detected: Web Application Enabled (http://localhost:62565)
2025-03-14 02:12:01 (4124): Preference change detected
2025-03-14 02:12:01 (4124): Setting CPU throttle for VM. (100%)
2025-03-14 02:12:02 (4124): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 80 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-14 02:12:03 (4124): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-14 02:12:04 (4124): Guest Log: BIOS: Booting from Hard Disk...
2025-03-14 02:12:06 (4124): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-14 02:12:06 (4124): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-14 02:12:06 (4124): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-14 02:12:11 (4124): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-14 02:12:11 (4124): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-14 02:12:16 (4124): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-14 02:12:16 (4124): Guest Log: 00:00:00.000144 main     Log opened 2025-03-14T02:12:14.641737000Z
2025-03-14 02:12:16 (4124): Guest Log: 00:00:00.000215 main     OS Product: Linux
2025-03-14 02:12:16 (4124): Guest Log: 00:00:00.000235 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-14 02:12:16 (4124): Guest Log: 00:00:00.000252 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-14 02:12:16 (4124): Guest Log: 00:00:00.000268 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-14 02:12:16 (4124): Guest Log: 00:00:00.000268 main     Process ID: 1366
2025-03-14 02:12:16 (4124): Guest Log: 00:00:00.000269 main     Package type: LINUX_64BITS_GENERIC
2025-03-14 02:12:16 (4124): Guest Log: 00:00:00.001152 main     5.2.32 r132073 started. Verbose level = 0
2025-03-14 02:12:16 (4124): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-14 02:12:16 (4124): Guest Log: [INFO] Mounting shared directory
2025-03-14 02:12:16 (4124): Guest Log: [INFO] Checking for init_data.xml
2025-03-14 02:12:19 (4124): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-14 02:12:19 (4124): Guest Log: [INFO] Detected branch: prod
2025-03-14 02:12:19 (4124): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-14 02:12:19 (4124): Guest Log: Copying input files
2025-03-14 02:12:20 (4124): Guest Log: Copied input files into RunAtlas.
2025-03-14 02:12:20 (4124): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-14 02:12:20 (4124): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-14 02:12:20 (4124): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-14 02:12:20 (4124): Guest Log: Further information can be found at the LHC@home message board.
2025-03-14 02:12:26 (4124): Guest Log: 00:00:10.009685 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 018 915 000ns (GuestNow=1 741 914 746 624 657 000 ns GuestLast=1 741 918 334 643 572 000 ns fSetTimeLastLoop=true )
2025-03-14 02:12:28 (4124): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-14 02:12:28 (4124): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-14 02:12:28 (4124): Guest Log: 2.6.3.0 1641 0 30192 143663 4 1 3117319 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-14 02:12:29 (4124): Guest Log: copied the webapp to /var/www
2025-03-14 02:12:29 (4124): Guest Log: ATHENA_PROC_NUMBER=8
2025-03-14 02:12:29 (4124): Guest Log: ATHENA_CORE_NUMBER=8
2025-03-14 02:12:29 (4124): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-14 02:12:29 (4124): Guest Log:  *** Starting ATLAS job. (PandaID=6554947286 taskID=43625193) ***
2025-03-14 03:32:21 (4124): Guest Log:  *** Job finished ***
2025-03-14 03:32:21 (4124): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:09,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:10,812 | INFO     | [job] queue monitor thread has finished
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:12,183 | INFO     | [data] queue_monitor thread has finished
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:13,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328384243520)>', '<ExcThread(monitor, started 140327402837760)>']
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:13,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:13,877 | INFO     | [monitor] control thread has ended
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,805 | INFO     | all workflow threads have been joined
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,805 | INFO     | end of generic workflow (traces error code: 0)
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,805 | INFO     | traces error code: 0
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,806 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,880 [wrapper] ==== pilot stdout END ====
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,884 [wrapper] ==== wrapper stdout RESUME ====
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,887 [wrapper] pilotpid: 5990
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,890 [wrapper] Pilot exit status: 0
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,962 [wrapper] pandaids: 6554947286
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,985 [wrapper] cleanup supervisor_pilot 24934 5991
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,989 [wrapper] Test setup, not cleaning
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,996 [wrapper] apfmon messages muted
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:18,999 [wrapper] ==== wrapper stdout END ====
2025-03-14 03:32:21 (4124): Guest Log: 2025-03-14 02:32:19,002 [wrapper] ==== wrapper stderr END ====
2025-03-14 03:32:21 (4124): Guest Log:  *** Error codes and diagnostics ***
2025-03-14 03:32:21 (4124): Guest Log:     "exeErrorCode": 0,
2025-03-14 03:32:21 (4124): Guest Log:     "exeErrorDiag": "",
2025-03-14 03:32:21 (4124): Guest Log:     "pilotErrorCode": 0,
2025-03-14 03:32:21 (4124): Guest Log:     "pilotErrorDiag": "",
2025-03-14 03:32:21 (4124): Guest Log:  *** Listing of results directory ***
2025-03-14 03:32:21 (4124): Guest Log: total 161460
2025-03-14 03:32:21 (4124): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 13 04:32 pilot3.tar.gz
2025-03-14 03:32:21 (4124): Guest Log: -rw-r--r--. 1 atlas atlas      5119 Mar 13 04:39 queuedata.json
2025-03-14 03:32:21 (4124): Guest Log: -rwx------. 1 atlas atlas     35865 Mar 13 04:39 runpilot2-wrapper.sh
2025-03-14 03:32:21 (4124): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Mar 14 01:12 start_atlas.sh
2025-03-14 03:32:21 (4124): Guest Log: -rwxr-xr-x. 1 atlas atlas    507025 Mar 14 01:12 input.tar.gz
2025-03-14 03:32:21 (4124): Guest Log: -rwxr-xr-x. 1 atlas atlas      8763 Mar 14 01:12 init_data.xml
2025-03-14 03:32:21 (4124): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 14 01:12 EVNT.43625189._000026.pool.root.1 -> /data/./ATLAS.root_0
2025-03-14 03:32:21 (4124): Guest Log: -rw-r--r--. 1 atlas atlas      2503 Mar 14 01:12 pandaJob.out
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas       424 Mar 14 01:12 setup.sh.local
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas    994585 Mar 14 01:13 agis_schedconf.cvmfs.json
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas   1589745 Mar 14 01:13 agis_ddmendpoints.agis.ALL.json
2025-03-14 03:32:21 (4124): Guest Log: drwx------. 4 atlas atlas      4096 Mar 14 01:13 pilot3
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas 160202970 Mar 14 02:31 HITS.43625193._000629.pool.root.1
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas        95 Mar 14 02:31 pilot_heartbeat.json
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas      1027 Mar 14 02:31 memory_monitor_summary.json
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas    284912 Mar 14 02:31 log.43625193._000629.job.log.tgz.1
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas      7704 Mar 14 02:32 heartbeat.json
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas      4465 Mar 14 02:32 pilotlog.txt
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas    398113 Mar 14 02:32 log.43625193._000629.job.log.1
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas       357 Mar 14 02:32 output.list
2025-03-14 03:32:21 (4124): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 14 02:32 runtime_log
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas    706560 Mar 14 02:32 result.tar.gz
2025-03-14 03:32:21 (4124): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Mar 14 02:32 runtime_log.err
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas       652 Mar 14 02:32 DBPLDmQXpC7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmJ90KDmt16Ulm.diag
2025-03-14 03:32:21 (4124): Guest Log: Looking for outputfile HITS.43625193._000629.pool.root.1
2025-03-14 03:32:21 (4124): Guest Log: HITS file was successfully produced
2025-03-14 03:32:21 (4124): Guest Log: -rw-------. 1 atlas atlas 160202970 Mar 14 02:31 /home/atlas/RunAtlas/HITS.43625193._000629.pool.root.1
2025-03-14 03:32:22 (4124): Guest Log: Successfully finished the ATLAS job!
2025-03-14 03:32:22 (4124): Guest Log: Copying the results back to the shared directory!
2025-03-14 03:32:22 (4124): Guest Log:  *** Contents of shared directory: ***
2025-03-14 03:32:22 (4124): Guest Log: total 460752
2025-03-14 03:32:22 (4124): Guest Log: -rwxrwxrwx. 1 root root 310352002 Mar 14 01:11 ATLAS.root_0
2025-03-14 03:32:22 (4124): Guest Log: -rwxrwxrwx. 1 root root 160202970 Mar 14  2025 HITS.pool.root.1
2025-03-14 03:32:22 (4124): Guest Log: -rwxrwxrwx. 1 root root      8763 Mar 14 01:11 init_data.xml
2025-03-14 03:32:22 (4124): Guest Log: -rwxrwxrwx. 1 root root    507025 Mar 13 07:24 input.tar.gz
2025-03-14 03:32:22 (4124): Guest Log: -rwxrwxrwx. 1 root root    706560 Mar 14  2025 result.tar.gz
2025-03-14 03:32:22 (4124): Guest Log: -rwxrwxrwx. 1 root root     17571 Mar 13 07:24 start_atlas.sh
2025-03-14 03:32:22 (4124): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-14 03:32:22 (4124): VM Completion File Detected.
2025-03-14 03:32:22 (4124): Powering off VM.
2025-03-14 03:32:23 (4124): Successfully stopped VM.
2025-03-14 03:32:23 (4124): Deregistering VM. (boinc_c8ff44353567c0db, slot#6)
2025-03-14 03:32:23 (4124): Removing network bandwidth throttle group from VM.
2025-03-14 03:32:24 (4124): Removing VM from VirtualBox.
03:32:29 (4124): called boinc_finish(0)

</stderr_txt>
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