Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:38:32 (3444956): wrapper (7.7.26015): starting
00:38:32 (3444956): wrapper: running run_atlas (--nthreads 8)
[2025-03-13 00:38:32] Arguments: --nthreads 8
[2025-03-13 00:38:32] Threads: 8
[2025-03-13 00:38:32] Checking for CVMFS
[2025-03-13 00:38:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-13 00:38:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-13 00:38:32] Running cvmfs_config stat atlas.cern.ch
[2025-03-13 00:38:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-13 00:38:32] 2.12.6.0 3794790 42872 438344 143625 0 467 26579240 37641216 26007 130560 0 2730446 98.699 9274494 26008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-03-13 00:38:32] CVMFS is ok
[2025-03-13 00:38:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-13 00:38:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-13 00:38:32] Further information can be found at the LHC@home message board.
[2025-03-13 00:38:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-13 00:38:32] Checking for apptainer binary...
[2025-03-13 00:38:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-13 00:38:32] Running /usr/bin/apptainer --version
[2025-03-13 00:38:32] apptainer version 1.3.6-1.el9
[2025-03-13 00:38:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-13 00:38:33] c6-2-11-1.aglt2.org
[2025-03-13 00:38:33] apptainer works
[2025-03-13 00:38:33] Set ATHENA_PROC_NUMBER=8
[2025-03-13 00:38:33] Set ATHENA_CORE_NUMBER=8
[2025-03-13 00:38:33] Starting ATLAS job with PandaID=6554941561
[2025-03-13 00:38:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-13 11:32:32]  *** The last 200 lines of the pilot log: ***
[2025-03-13 11:32:32] 2025-03-13 15:31:57,146 | INFO     | sum of square deviations: 80147006442.74216
[2025-03-13 11:32:32] 2025-03-13 15:31:57,155 | INFO     | sum of deviations: 455968860053.9044
[2025-03-13 11:32:32] 2025-03-13 15:31:57,155 | INFO     | mean x: 1741860167.1067505
[2025-03-13 11:32:32] 2025-03-13 15:31:57,155 | INFO     | mean y: 2059492.0455259026
[2025-03-13 11:32:32] 2025-03-13 15:31:57,155 | INFO     | -- intersect: -9907655543.117733
[2025-03-13 11:32:32] 2025-03-13 15:31:57,156 | INFO     | intersect: -9907655543.117733
[2025-03-13 11:32:32] 2025-03-13 15:31:57,156 | INFO     | chi2: 6.403046870976803
[2025-03-13 11:32:32] 2025-03-13 15:31:57,157 | INFO     | current chi2=6.403046870976803 (change=9.552973015197388 %)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,157 | INFO     | right removable region: 636
[2025-03-13 11:32:32] 2025-03-13 15:31:57,157 | INFO     | model: linear, x: [1741841074.0, 1741841135.0, 1741841196.0, 1741841257.0, 1741841318.0, 1741841379.0, 1741841440.0, 1741841501.0, 1741841562.0, 1741841623.0, 1741
[2025-03-13 11:32:32] 2025-03-13 15:31:57,158 | INFO     | sum of square deviations: 80146964962.74216
[2025-03-13 11:32:32] 2025-03-13 15:31:57,166 | INFO     | sum of deviations: 276866167870.925
[2025-03-13 11:32:32] 2025-03-13 15:31:57,167 | INFO     | mean x: 1741860472.1067505
[2025-03-13 11:32:32] 2025-03-13 15:31:57,167 | INFO     | mean y: 2068019.4128728413
[2025-03-13 11:32:32] 2025-03-13 15:31:57,167 | INFO     | -- intersect: -6015155890.465998
[2025-03-13 11:32:32] 2025-03-13 15:31:57,167 | INFO     | intersect: -6015155890.465998
[2025-03-13 11:32:32] 2025-03-13 15:31:57,168 | INFO     | chi2: 4.41543305734234
[2025-03-13 11:32:32] 2025-03-13 15:31:57,168 | INFO     | current chi2=4.41543305734234 (change=37.629256675094716 %)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,169 | INFO     | model: linear, x: [1741841379.0, 1741841440.0, 1741841501.0, 1741841562.0, 1741841623.0, 1741841684.0, 1741841745.0, 1741841806.0, 1741841867.0, 1741841928.0, 1741
[2025-03-13 11:32:32] 2025-03-13 15:31:57,173 | INFO     | sum of square deviations: 78274388182.68353
[2025-03-13 11:32:32] 2025-03-13 15:31:57,182 | INFO     | sum of deviations: 168161803562.77222
[2025-03-13 11:32:32] 2025-03-13 15:31:57,183 | INFO     | mean x: 1741860624.607595
[2025-03-13 11:32:32] 2025-03-13 15:31:57,183 | INFO     | mean y: 2076872.1724683545
[2025-03-13 11:32:32] 2025-03-13 15:31:57,183 | INFO     | -- intersect: -3740072137.0968356
[2025-03-13 11:32:32] 2025-03-13 15:31:57,183 | INFO     | intersect: -3740072137.0968356
[2025-03-13 11:32:32] 2025-03-13 15:31:57,184 | INFO     | chi2: 2.9716836501428388
[2025-03-13 11:32:32] 2025-03-13 15:31:57,184 | INFO     | current chi2=2.9716836501428388 (change=32.6977985726387 %)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,185 | INFO     | model: linear, x: [1741841684.0, 1741841745.0, 1741841806.0, 1741841867.0, 1741841928.0, 1741841989.0, 1741842050.0, 1741842112.0, 1741842173.0, 1741842234.0, 1741
[2025-03-13 11:32:32] 2025-03-13 15:31:57,185 | INFO     | sum of square deviations: 76431207302.62514
[2025-03-13 11:32:32] 2025-03-13 15:31:57,194 | INFO     | sum of deviations: 81974069638.66183
[2025-03-13 11:32:32] 2025-03-13 15:31:57,194 | INFO     | mean x: 1741860777.108453
[2025-03-13 11:32:32] 2025-03-13 15:31:57,194 | INFO     | mean y: 2083996.0637958532
[2025-03-13 11:32:32] 2025-03-13 15:31:57,194 | INFO     | -- intersect: -1866098146.84261
[2025-03-13 11:32:32] 2025-03-13 15:31:57,194 | INFO     | intersect: -1866098146.84261
[2025-03-13 11:32:32] 2025-03-13 15:31:57,195 | INFO     | chi2: 2.0183122352668503
[2025-03-13 11:32:32] 2025-03-13 15:31:57,195 | INFO     | current chi2=2.0183122352668503 (change=32.081860894922755 %)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,196 | INFO     | model: linear, x: [1741841989.0, 1741842050.0, 1741842112.0, 1741842173.0, 1741842234.0, 1741842294.0, 1741842355.0, 1741842417.0, 1741842477.0, 1741842538.0, 1741
[2025-03-13 11:32:32] 2025-03-13 15:31:57,197 | INFO     | sum of square deviations: 74617189760.06592
[2025-03-13 11:32:32] 2025-03-13 15:31:57,206 | INFO     | sum of deviations: 42531721575.11732
[2025-03-13 11:32:32] 2025-03-13 15:31:57,206 | INFO     | mean x: 1741860929.6093247
[2025-03-13 11:32:32] 2025-03-13 15:31:57,206 | INFO     | mean y: 2087309.2556270096
[2025-03-13 11:32:32] 2025-03-13 15:31:57,207 | INFO     | -- intersect: -990771632.7514296
[2025-03-13 11:32:32] 2025-03-13 15:31:57,207 | INFO     | intersect: -990771632.7514296
[2025-03-13 11:32:32] 2025-03-13 15:31:57,207 | INFO     | chi2: 1.8270007515185478
[2025-03-13 11:32:32] 2025-03-13 15:31:57,208 | INFO     | current chi2=1.8270007515185478 (change=9.478785314057632 %)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,208 | INFO     | left removable region: 40
[2025-03-13 11:32:32] 2025-03-13 15:31:57,208 | INFO     | model: linear, x: [1741843209.0, 1741843270.0, 1741843331.0, 1741843392.0, 1741843454.0, 1741843514.0, 1741843576.0, 1741843636.0, 1741843698.0, 1741843758.0, 1741
[2025-03-13 11:32:32] 2025-03-13 15:31:57,209 | INFO     | sum of square deviations: 65645728488.75662
[2025-03-13 11:32:32] 2025-03-13 15:31:57,216 | INFO     | sum of deviations: 51096495309.06879
[2025-03-13 11:32:32] 2025-03-13 15:31:57,217 | INFO     | mean x: 1741861356.602349
[2025-03-13 11:32:32] 2025-03-13 15:31:57,217 | INFO     | mean y: 2095058.2365771811
[2025-03-13 11:32:32] 2025-03-13 15:31:57,217 | INFO     | -- intersect: -1353713045.1333773
[2025-03-13 11:32:32] 2025-03-13 15:31:57,217 | INFO     | intersect: -1353713045.1333773
[2025-03-13 11:32:32] 2025-03-13 15:31:57,218 | INFO     | chi2: 0.9953583115734983
[2025-03-13 11:32:32] 2025-03-13 15:31:57,218 | INFO     | -- intersect: -1353713045.1333773
[2025-03-13 11:32:32] 2025-03-13 15:31:57,218 | INFO     | current memory leak: 0.78 B/s (using 596 data points, chi2=1.00)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | ..............................
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | . Timing measurements:
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | . get job = 0 s
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | . initial setup = 3 s
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | . payload setup = 10 s
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | . stage-in = 0 s
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | . payload execution = 39115 s
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | . stage-out = 4 s
[2025-03-13 11:32:32] 2025-03-13 15:31:57,220 | INFO     | . log creation = 0 s
[2025-03-13 11:32:32] 2025-03-13 15:31:57,221 | INFO     | ..............................
[2025-03-13 11:32:32] 2025-03-13 15:31:57,327 | INFO     | 
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | job summary report
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | --------------------------------------------------
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | PanDA job id: 6554941561
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | task id: 43625418
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | errors: (none)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | pilot state: finished 
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | transexitcode: 0
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | exeerrorcode: 0
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | exeerrordiag: 
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | exitcode: 0
[2025-03-13 11:32:32] 2025-03-13 15:31:57,328 | INFO     | exitmsg: OK
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | cpuconsumptiontime: 114349 s
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | nevents: 400
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | neventsw: 0
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | pid: 3482200
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | pgrp: 3482200
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | corecount: 8
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | event service: False
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | sizes: {0: 2392973, 1: 2393172, 10: 2393378, 12: 2393406, 39129: 2435654, 39136: 2444595, 39138: 2444779, 39169: 2444949}
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | --------------------------------------------------
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | 
[2025-03-13 11:32:32] 2025-03-13 15:31:57,329 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-03-13 11:32:32] 2025-03-13 15:31:57,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | job 6554941561 has completed (purged errors)
[2025-03-13 11:32:32] 2025-03-13 15:31:57,387 | INFO     | overall cleanup function is called
[2025-03-13 11:32:32] 2025-03-13 15:31:58,398 | INFO     | --- collectZombieJob: --- 10, [3482200]
[2025-03-13 11:32:32] 2025-03-13 15:31:58,398 | INFO     | zombie collector waiting for pid 3482200
[2025-03-13 11:32:32] 2025-03-13 15:31:58,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-13 11:32:32] 2025-03-13 15:31:58,399 | INFO     | collected zombie processes
[2025-03-13 11:32:32] 2025-03-13 15:31:58,399 | INFO     | will attempt to kill all subprocesses of pid=3482200
[2025-03-13 11:32:32] 2025-03-13 15:31:58,998 | INFO     | process IDs to be killed: [3482200] (in reverse order)
[2025-03-13 11:32:32] 2025-03-13 15:31:59,815 | WARNING  | found no corresponding commands to process id(s)
[2025-03-13 11:32:32] 2025-03-13 15:31:59,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-13 11:32:32] 2025-03-13 15:31:59,888 | INFO     | did not find any defunct processes belonging to 3482200
[2025-03-13 11:32:32] 2025-03-13 15:31:59,910 | INFO     | did not find any defunct processes belonging to 3482200
[2025-03-13 11:32:32] 2025-03-13 15:31:59,911 | INFO     | ready for new job
[2025-03-13 11:32:32] 2025-03-13 15:31:59,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-13 11:32:32] 2025-03-13 15:31:59,923 | INFO     | ***************************************
[2025-03-13 11:32:32] 2025-03-13 15:31:59,923 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-03-13 11:32:32] 2025-03-13 15:31:59,923 | INFO     | ***************************************
[2025-03-13 11:32:32] 2025-03-13 15:31:59,923 | INFO     | 
[2025-03-13 11:32:32] 2025-03-13 15:31:59,965 | INFO     | architecture information:
[2025-03-13 11:32:32] 2025-03-13 15:31:59,965 | INFO     | executing command: cat /etc/os-release
[2025-03-13 11:32:32] 2025-03-13 15:32:00,092 | INFO     | cat /etc/os-release:
[2025-03-13 11:32:32] NAME="CentOS Linux"
[2025-03-13 11:32:32] VERSION="7 (Core)"
[2025-03-13 11:32:32] ID="centos"
[2025-03-13 11:32:32] ID_LIKE="rhel fedora"
[2025-03-13 11:32:32] VERSION_ID="7"
[2025-03-13 11:32:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-13 11:32:32] ANSI_COLOR="0;31"
[2025-03-13 11:32:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-13 11:32:32] HOME_URL="https://www.centos.org/"
[2025-03-13 11:32:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-13 11:32:32] 
[2025-03-13 11:32:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-13 11:32:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-13 11:32:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-13 11:32:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-13 11:32:32] 
[2025-03-13 11:32:32] 2025-03-13 15:32:00,093 | INFO     | ***************************************
[2025-03-13 11:32:32] 2025-03-13 15:32:00,619 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-03-13 11:32:32] 2025-03-13 15:32:00,694 | INFO     | sufficient remaining disk space (92311388160 B)
[2025-03-13 11:32:32] 2025-03-13 15:32:00,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-13 11:32:32] 2025-03-13 15:32:00,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-13 11:32:32] 2025-03-13 15:32:00,950 | INFO     | all data control threads have been joined
[2025-03-13 11:32:32] 2025-03-13 15:32:01,048 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-03-13 11:32:32] 2025-03-13 15:32:01,048 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-03-13 11:32:32] 2025-03-13 15:32:01,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-13 11:32:32] 2025-03-13 15:32:01,049 | INFO     | will abort loop
[2025-03-13 11:32:32] 2025-03-13 15:32:01,281 | INFO     | all payload control threads have been joined
[2025-03-13 11:32:32] 2025-03-13 15:32:01,704 | INFO     | [payload] validate_post thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:01,707 | INFO     | [job] retrieve thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:01,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-13 11:32:32] 2025-03-13 15:32:01,920 | INFO     | all job control threads have been joined
[2025-03-13 11:32:32] 2025-03-13 15:32:01,990 | INFO     | [data] control thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,177 | INFO     | [job] job monitor thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,178 | INFO     | [payload] validate_pre thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,178 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,297 | INFO     | [payload] control thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,345 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-13 11:32:32] 2025-03-13 15:32:02,545 | INFO     | [payload] failed_post thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,656 | INFO     | [job] validate thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,657 | INFO     | [data] copytool_in thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,657 | INFO     | [job] create_data_payload thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:02,699 | INFO     | PID=3455564 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-03-13 11:32:32] 2025-03-13 15:32:02,699 | INFO     | .. there are 35 such processes running
[2025-03-13 11:32:32] 2025-03-13 15:32:02,700 | INFO     | found 0 job(s) in 20 queues
[2025-03-13 11:32:32] 2025-03-13 15:32:02,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-13 11:32:32] 2025-03-13 15:32:02,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-13 11:32:32] 2025-03-13 15:32:02,926 | INFO     | [job] control thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:03,003 | INFO     | [payload] execute_payloads thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:03,350 | INFO     | [job] queue monitor thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:03,720 | INFO     | [data] copytool_out thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:03,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-13 11:32:32] 2025-03-13 15:32:07,858 | INFO     | [data] queue_monitor thread has finished
[2025-03-13 11:32:32] 2025-03-13 15:32:09,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139641641903936)>', '<ExcThread(monitor, started 139641290204928)>']
[2025-03-13 11:32:32] 2025-03-13 15:32:10,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-13 11:32:32] 2025-03-13 15:32:10,771 | INFO     | [monitor] control thread has ended
[2025-03-13 11:32:32] 2025-03-13 15:32:14,826 | INFO     | all workflow threads have been joined
[2025-03-13 11:32:32] 2025-03-13 15:32:14,826 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-13 11:32:32] 2025-03-13 15:32:14,827 | INFO     | traces error code: 0
[2025-03-13 11:32:32] 2025-03-13 15:32:14,827 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-13 11:32:32] 2025-03-13 15:32:15,960 [wrapper] ==== pilot stdout END ====
[2025-03-13 11:32:32] 2025-03-13 15:32:16,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-13 11:32:32] 2025-03-13 15:32:16,016 [wrapper] pilotpid: 3455564
[2025-03-13 11:32:32] 2025-03-13 15:32:16,036 [wrapper] Pilot exit status: 0
[2025-03-13 11:32:32] 2025-03-13 15:32:16,135 [wrapper] pandaids: 6554941561
[2025-03-13 11:32:32] 2025-03-13 15:32:16,350 [wrapper] cleanup supervisor_pilot 3171142 3455565
[2025-03-13 11:32:32] 2025-03-13 15:32:16,371 [wrapper] Test setup, not cleaning
[2025-03-13 11:32:32] 2025-03-13 15:32:16,411 [wrapper] apfmon messages muted
[2025-03-13 11:32:32] 2025-03-13 15:32:16,440 [wrapper] ==== wrapper stdout END ====
[2025-03-13 11:32:32] 2025-03-13 15:32:16,451 [wrapper] ==== wrapper stderr END ====
[2025-03-13 11:32:32]  *** Error codes and diagnostics ***
[2025-03-13 11:32:32]     "exeErrorCode": 0,
[2025-03-13 11:32:32]     "exeErrorDiag": "",
[2025-03-13 11:32:32]     "pilotErrorCode": 0,
[2025-03-13 11:32:32]     "pilotErrorDiag": "",
[2025-03-13 11:32:32]  *** Listing of results directory ***
[2025-03-13 11:32:32] total 483772
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas    494584 Mar 13 00:32 pilot3.tar.gz
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas      5119 Mar 13 00:35 queuedata.json
[2025-03-13 11:32:32] -rwx------. 1 boincer umatlas     35865 Mar 13 00:35 runpilot2-wrapper.sh
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas       100 Mar 13 00:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-13 11:32:32] -rwxr-xr-x. 1 boincer umatlas      7986 Mar 13 00:38 run_atlas
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas       105 Mar 13 00:38 job.xml
[2025-03-13 11:32:32] -rw-r--r--. 2 boincer umatlas 313779131 Mar 13 00:38 EVNT.43625414._000015.pool.root.1
[2025-03-13 11:32:32] -rw-r--r--. 2 boincer umatlas     17571 Mar 13 00:38 start_atlas.sh
[2025-03-13 11:32:32] drwxrwx--x. 2 boincer umatlas      4096 Mar 13 00:38 shared
[2025-03-13 11:32:32] -rw-r--r--. 2 boincer umatlas    507039 Mar 13 00:38 input.tar.gz
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas         0 Mar 13 00:38 boinc_lockfile
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas      2543 Mar 13 00:38 pandaJob.out
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas       467 Mar 13 00:38 setup.sh.local
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas    996940 Mar 13 00:38 agis_schedconf.cvmfs.json
[2025-03-13 11:32:32] drwx------. 4 boincer umatlas      4096 Mar 13 00:38 pilot3
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas 167012090 Mar 13 11:30 HITS.43625418._000354.pool.root.1
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas       532 Mar 13 11:30 boinc_task_state.xml
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas      6857 Mar 13 11:30 init_data.xml
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas      1058 Mar 13 11:31 memory_monitor_summary.json
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas   1589745 Mar 13 11:31 agis_ddmendpoints.agis.ALL.json
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas    712053 Mar 13 11:31 log.43625418._000354.job.log.tgz.1
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas      7746 Mar 13 11:31 heartbeat.json
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas        95 Mar 13 11:32 pilot_heartbeat.json
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas      4800 Mar 13 11:32 pilotlog.txt
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas   4666810 Mar 13 11:32 log.43625418._000354.job.log.1
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas       357 Mar 13 11:32 output.list
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas       620 Mar 13 11:32 runtime_log
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas   5396480 Mar 13 11:32 result.tar.gz
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas     11425 Mar 13 11:32 runtime_log.err
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas       665 Mar 13 11:32 A0LKDmMTpC7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmdcjKDm30BrDo.diag
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas        29 Mar 13 11:32 wrapper_checkpoint.txt
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas      8192 Mar 13 11:32 boinc_mmap_file
[2025-03-13 11:32:32] -rw-r--r--. 1 boincer umatlas     21652 Mar 13 11:32 stderr.txt
[2025-03-13 11:32:32] HITS file was successfully produced:
[2025-03-13 11:32:32] -rw-------. 1 boincer umatlas 167012090 Mar 13 11:30 shared/HITS.pool.root.1
[2025-03-13 11:32:33]  *** Contents of shared directory: ***
[2025-03-13 11:32:33] total 475324
[2025-03-13 11:32:33] -rw-r--r--. 2 boincer umatlas 313779131 Mar 13 00:38 ATLAS.root_0
[2025-03-13 11:32:33] -rw-r--r--. 2 boincer umatlas     17571 Mar 13 00:38 start_atlas.sh
[2025-03-13 11:32:33] -rw-r--r--. 2 boincer umatlas    507039 Mar 13 00:38 input.tar.gz
[2025-03-13 11:32:33] -rw-------. 1 boincer umatlas 167012090 Mar 13 11:30 HITS.pool.root.1
[2025-03-13 11:32:33] -rw-------. 1 boincer umatlas   5396480 Mar 13 11:32 result.tar.gz
11:32:34 (3444956): run_atlas exited; CPU time 114668.158463
11:32:34 (3444956): called boinc_finish(0)

</stderr_txt>
]]>

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