Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:07:59 (8561): wrapper (7.7.26015): starting
06:07:59 (8561): wrapper: running run_atlas (--nthreads 8)
[2025-03-12 06:07:59] Arguments: --nthreads 8
[2025-03-12 06:07:59] Threads: 8
[2025-03-12 06:07:59] Checking for CVMFS
[2025-03-12 06:07:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-12 06:07:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-12 06:07:59] Running cvmfs_config stat atlas.cern.ch
[2025-03-12 06:07:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-12 06:07:59] 2.11.2.0 18284 68710 92128 143588 3 153 16315458 25165825 3056 130560 0 116446 99.989 94264 2060 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-03-12 06:07:59] CVMFS is ok
[2025-03-12 06:07:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-12 06:07:59] Checking for apptainer binary...
[2025-03-12 06:07:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-12 06:07:59] Running /usr/bin/apptainer --version
[2025-03-12 06:08:00] apptainer version 1.3.2-1.el7
[2025-03-12 06:08:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-12 06:08:01] cg-vwn329.simple-grid.lan
[2025-03-12 06:08:01] apptainer works
[2025-03-12 06:08:01] Set ATHENA_PROC_NUMBER=8
[2025-03-12 06:08:01] Set ATHENA_CORE_NUMBER=8
[2025-03-12 06:08:01] Starting ATLAS job with PandaID=6551284797
[2025-03-12 06:08:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-12 11:34:05]  *** The last 200 lines of the pilot log: ***
[2025-03-12 11:34:05] 2025-03-12 10:33:46,974 | INFO     | chi2: 5.327716235213961
[2025-03-12 11:34:05] 2025-03-12 10:33:46,975 | INFO     | model: linear, x: [1741756234.0, 1741756295.0, 1741756356.0, 1741756417.0, 1741756478.0, 1741756539.0, 1741756600.0, 1741756661.0, 1741756722.0, 1741756783.0, 1741
[2025-03-12 11:34:05] 2025-03-12 10:33:46,976 | INFO     | sum of square deviations: 9417545878.0
[2025-03-12 11:34:05] 2025-03-12 10:33:46,980 | INFO     | sum of deviations: 186338308692.0
[2025-03-12 11:34:05] 2025-03-12 10:33:46,981 | INFO     | mean x: 1741765719.5
[2025-03-12 11:34:05] 2025-03-12 10:33:46,981 | INFO     | mean y: 2455399.487179487
[2025-03-12 11:34:05] 2025-03-12 10:33:46,981 | INFO     | -- intersect: -34460628987.23424
[2025-03-12 11:34:05] 2025-03-12 10:33:46,981 | INFO     | intersect: -34460628987.23424
[2025-03-12 11:34:05] 2025-03-12 10:33:46,982 | INFO     | chi2: 4.5657830588078845
[2025-03-12 11:34:05] 2025-03-12 10:33:46,982 | INFO     | current chi2=4.5657830588078845 (change=14.301309280888852 %)
[2025-03-12 11:34:05] 2025-03-12 10:33:46,982 | INFO     | right removable region: 311
[2025-03-12 11:34:05] 2025-03-12 10:33:46,983 | INFO     | model: linear, x: [1741756539.0, 1741756600.0, 1741756661.0, 1741756722.0, 1741756783.0, 1741756844.0, 1741756905.0, 1741756966.0, 1741757027.0, 1741757088.0, 1741
[2025-03-12 11:34:05] 2025-03-12 10:33:46,984 | INFO     | sum of square deviations: 9417545878.0
[2025-03-12 11:34:05] 2025-03-12 10:33:46,988 | INFO     | sum of deviations: 83506697341.5
[2025-03-12 11:34:05] 2025-03-12 10:33:46,989 | INFO     | mean x: 1741766024.5
[2025-03-12 11:34:05] 2025-03-12 10:33:46,989 | INFO     | mean y: 2477613.605769231
[2025-03-12 11:34:05] 2025-03-12 10:33:46,989 | INFO     | -- intersect: -15442005496.097769
[2025-03-12 11:34:05] 2025-03-12 10:33:46,990 | INFO     | intersect: -15442005496.097769
[2025-03-12 11:34:05] 2025-03-12 10:33:46,990 | INFO     | chi2: 2.512523792762701
[2025-03-12 11:34:05] 2025-03-12 10:33:46,990 | INFO     | current chi2=2.512523792762701 (change=52.84051023295917 %)
[2025-03-12 11:34:05] 2025-03-12 10:33:46,991 | INFO     | model: linear, x: [1741756844.0, 1741756905.0, 1741756966.0, 1741757027.0, 1741757088.0, 1741757149.0, 1741757210.0, 1741757271.0, 1741757332.0, 1741757393.0, 1741
[2025-03-12 11:34:05] 2025-03-12 10:33:46,991 | INFO     | sum of square deviations: 8971993338.0
[2025-03-12 11:34:05] 2025-03-12 10:33:46,998 | INFO     | sum of deviations: 25664949192.0
[2025-03-12 11:34:05] 2025-03-12 10:33:46,999 | INFO     | mean x: 1741766177.0
[2025-03-12 11:34:05] 2025-03-12 10:33:46,999 | INFO     | mean y: 2497411.4951140066
[2025-03-12 11:34:05] 2025-03-12 10:33:46,999 | INFO     | -- intersect: -4979933889.218929
[2025-03-12 11:34:05] 2025-03-12 10:33:46,999 | INFO     | intersect: -4979933889.218929
[2025-03-12 11:34:05] 2025-03-12 10:33:47,000 | INFO     | chi2: 1.3168332844015307
[2025-03-12 11:34:05] 2025-03-12 10:33:47,000 | INFO     | current chi2=1.3168332844015307 (change=47.58922131624563 %)
[2025-03-12 11:34:05] 2025-03-12 10:33:47,000 | INFO     | model: linear, x: [1741757149.0, 1741757210.0, 1741757271.0, 1741757332.0, 1741757393.0, 1741757454.0, 1741757515.0, 1741757576.0, 1741757637.0, 1741757698.0, 1741
[2025-03-12 11:34:05] 2025-03-12 10:33:47,001 | INFO     | sum of square deviations: 8540720135.5
[2025-03-12 11:34:05] 2025-03-12 10:33:47,005 | INFO     | sum of deviations: -5990753941.0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,005 | INFO     | mean x: 1741766329.5
[2025-03-12 11:34:05] 2025-03-12 10:33:47,005 | INFO     | mean y: 2508544.0529801324
[2025-03-12 11:34:05] 2025-03-12 10:33:47,005 | INFO     | -- intersect: 1224243167.9732337
[2025-03-12 11:34:05] 2025-03-12 10:33:47,005 | INFO     | intersect: 1224243167.9732337
[2025-03-12 11:34:05] 2025-03-12 10:33:47,006 | INFO     | chi2: 0.820079618854479
[2025-03-12 11:34:05] 2025-03-12 10:33:47,006 | INFO     | current chi2=0.820079618854479 (change=37.723352791224016 %)
[2025-03-12 11:34:05] 2025-03-12 10:33:47,007 | INFO     | model: linear, x: [1741757454.0, 1741757515.0, 1741757576.0, 1741757637.0, 1741757698.0, 1741757759.0, 1741757820.0, 1741757881.0, 1741757942.0, 1741758003.0, 1741
[2025-03-12 11:34:05] 2025-03-12 10:33:47,007 | INFO     | sum of square deviations: 8123493708.0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,010 | INFO     | sum of deviations: -4823058207.999998
[2025-03-12 11:34:05] 2025-03-12 10:33:47,011 | INFO     | mean x: 1741766482.0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,011 | INFO     | mean y: 2508098.087542088
[2025-03-12 11:34:05] 2025-03-12 10:33:47,011 | INFO     | -- intersect: 1036624874.6114713
[2025-03-12 11:34:05] 2025-03-12 10:33:47,011 | INFO     | intersect: 1036624874.6114713
[2025-03-12 11:34:05] 2025-03-12 10:33:47,011 | INFO     | chi2: 0.8043184009925188
[2025-03-12 11:34:05] 2025-03-12 10:33:47,012 | INFO     | current chi2=0.8043184009925188 (change=1.9219131288710822 %)
[2025-03-12 11:34:05] 2025-03-12 10:33:47,012 | INFO     | left removable region: 40
[2025-03-12 11:34:05] 2025-03-12 10:33:47,012 | INFO     | model: linear, x: [1741758674.0, 1741758735.0, 1741758796.0, 1741758857.0, 1741758918.0, 1741758979.0, 1741759040.0, 1741759101.0, 1741759162.0, 1741759223.0, 1741
[2025-03-12 11:34:05] 2025-03-12 10:33:47,012 | INFO     | sum of square deviations: 6171352920.0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,015 | INFO     | sum of deviations: 8585792822.000001
[2025-03-12 11:34:05] 2025-03-12 10:33:47,015 | INFO     | mean x: 1741766909.0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,015 | INFO     | mean y: 2517855.2472324725
[2025-03-12 11:34:05] 2025-03-12 10:33:47,015 | INFO     | -- intersect: -2420686589.3446884
[2025-03-12 11:34:05] 2025-03-12 10:33:47,015 | INFO     | intersect: -2420686589.3446884
[2025-03-12 11:34:05] 2025-03-12 10:33:47,016 | INFO     | chi2: 0.000722456067821941
[2025-03-12 11:34:05] 2025-03-12 10:33:47,016 | INFO     | -- intersect: -2420686589.3446884
[2025-03-12 11:34:05] 2025-03-12 10:33:47,016 | INFO     | current memory leak: 1.39 B/s (using 271 data points, chi2=0.00)
[2025-03-12 11:34:05] 2025-03-12 10:33:47,018 | INFO     | ..............................
[2025-03-12 11:34:05] 2025-03-12 10:33:47,018 | INFO     | . Timing measurements:
[2025-03-12 11:34:05] 2025-03-12 10:33:47,018 | INFO     | . get job = 0 s
[2025-03-12 11:34:05] 2025-03-12 10:33:47,018 | INFO     | . initial setup = 3 s
[2025-03-12 11:34:05] 2025-03-12 10:33:47,018 | INFO     | . payload setup = 23 s
[2025-03-12 11:34:05] 2025-03-12 10:33:47,018 | INFO     | . stage-in = 0 s
[2025-03-12 11:34:05] 2025-03-12 10:33:47,019 | INFO     | . payload execution = 19314 s
[2025-03-12 11:34:05] 2025-03-12 10:33:47,019 | INFO     | . stage-out = 5 s
[2025-03-12 11:34:05] 2025-03-12 10:33:47,019 | INFO     | . log creation = 2 s
[2025-03-12 11:34:05] 2025-03-12 10:33:47,019 | INFO     | ..............................
[2025-03-12 11:34:05] 2025-03-12 10:33:47,212 | INFO     | 
[2025-03-12 11:34:05] 2025-03-12 10:33:47,212 | INFO     | job summary report
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | --------------------------------------------------
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | PanDA job id: 6551284797
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | task id: 43558062
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | errors: (none)
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | pilot state: finished 
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | transexitcode: 0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | exeerrorcode: 0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | exeerrordiag: 
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | exitcode: 0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,213 | INFO     | exitmsg: OK
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | cpuconsumptiontime: 69913 s
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | nevents: 400
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | neventsw: 0
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | pid: 28474
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | pgrp: 28474
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | corecount: 8
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | event service: False
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | sizes: {0: 2391944, 1: 2392629, 2: 2392828, 13: 2392828, 22: 2393090, 23: 2393118, 19342: 2425482, 19343: 2425481, 19349: 2434478, 19351: 2434534, 19452: 2434704}
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | --------------------------------------------------
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | 
[2025-03-12 11:34:05] 2025-03-12 10:33:47,214 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-03-12 11:34:05] 2025-03-12 10:33:47,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,811 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-12 11:34:05] 2025-03-12 10:33:47,812 | INFO     | job 6551284797 has completed (purged errors)
[2025-03-12 11:34:05] 2025-03-12 10:33:47,812 | INFO     | overall cleanup function is called
[2025-03-12 11:34:05] 2025-03-12 10:33:48,823 | INFO     | --- collectZombieJob: --- 10, [28474]
[2025-03-12 11:34:05] 2025-03-12 10:33:48,824 | INFO     | zombie collector waiting for pid 28474
[2025-03-12 11:34:05] 2025-03-12 10:33:48,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-12 11:34:05] 2025-03-12 10:33:48,824 | INFO     | collected zombie processes
[2025-03-12 11:34:05] 2025-03-12 10:33:48,824 | INFO     | will attempt to kill all subprocesses of pid=28474
[2025-03-12 11:34:05] 2025-03-12 10:33:49,691 | INFO     | process IDs to be killed: [28474] (in reverse order)
[2025-03-12 11:34:05] 2025-03-12 10:33:50,390 | WARNING  | found no corresponding commands to process id(s)
[2025-03-12 11:34:05] 2025-03-12 10:33:50,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-12 11:34:05] 2025-03-12 10:33:50,401 | INFO     | did not find any defunct processes belonging to 28474
[2025-03-12 11:34:05] 2025-03-12 10:33:50,405 | INFO     | did not find any defunct processes belonging to 28474
[2025-03-12 11:34:05] 2025-03-12 10:33:50,406 | INFO     | ready for new job
[2025-03-12 11:34:05] 2025-03-12 10:33:50,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-12 11:34:05] 2025-03-12 10:33:50,409 | INFO     | **************************************
[2025-03-12 11:34:05] 2025-03-12 10:33:50,409 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-03-12 11:34:05] 2025-03-12 10:33:50,409 | INFO     | **************************************
[2025-03-12 11:34:05] 2025-03-12 10:33:50,410 | INFO     | 
[2025-03-12 11:34:05] 2025-03-12 10:33:50,410 | INFO     | pilot is running in a VM
[2025-03-12 11:34:05] 2025-03-12 10:33:50,410 | INFO     | architecture information:
[2025-03-12 11:34:05] 2025-03-12 10:33:50,425 | INFO     | executing command: cat /etc/os-release
[2025-03-12 11:34:05] 2025-03-12 10:33:50,577 | INFO     | cat /etc/os-release:
[2025-03-12 11:34:05] NAME="CentOS Linux"
[2025-03-12 11:34:05] VERSION="7 (Core)"
[2025-03-12 11:34:05] ID="centos"
[2025-03-12 11:34:05] ID_LIKE="rhel fedora"
[2025-03-12 11:34:05] VERSION_ID="7"
[2025-03-12 11:34:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-12 11:34:05] ANSI_COLOR="0;31"
[2025-03-12 11:34:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-12 11:34:05] HOME_URL="https://www.centos.org/"
[2025-03-12 11:34:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-12 11:34:05] 
[2025-03-12 11:34:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-12 11:34:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-12 11:34:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-12 11:34:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-12 11:34:05] 
[2025-03-12 11:34:05] 2025-03-12 10:33:50,578 | INFO     | **************************************
[2025-03-12 11:34:05] 2025-03-12 10:33:51,082 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-03-12 11:34:05] 2025-03-12 10:33:51,341 | INFO     | sufficient remaining disk space (489908338688 B)
[2025-03-12 11:34:05] 2025-03-12 10:33:51,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-12 11:34:05] 2025-03-12 10:33:51,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-12 11:34:05] 2025-03-12 10:33:51,343 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-03-12 11:34:05] 2025-03-12 10:33:51,347 | INFO     | found 0 job(s) in 20 queues
[2025-03-12 11:34:05] 2025-03-12 10:33:51,347 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-12 11:34:05] 2025-03-12 10:33:51,347 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-12 11:34:05] 2025-03-12 10:33:51,584 | INFO     | all data control threads have been joined
[2025-03-12 11:34:05] 2025-03-12 10:33:52,178 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-12 11:34:05] 2025-03-12 10:33:52,228 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-12 11:34:05] 2025-03-12 10:33:52,308 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-12 11:34:05] 2025-03-12 10:33:52,309 | INFO     | aborting loop
[2025-03-12 11:34:05] 2025-03-12 10:33:52,348 | INFO     | [job] retrieve thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:52,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-12 11:34:05] 2025-03-12 10:33:52,540 | INFO     | [job] create_data_payload thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:52,591 | INFO     | [data] control thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:52,710 | INFO     | [payload] failed_post thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:52,738 | INFO     | all payload control threads have been joined
[2025-03-12 11:34:05] 2025-03-12 10:33:52,903 | INFO     | [data] copytool_in thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:52,908 | INFO     | all job control threads have been joined
[2025-03-12 11:34:05] 2025-03-12 10:33:53,052 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:53,132 | INFO     | [job] validate thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:53,235 | INFO     | [job] queue monitor thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:53,314 | INFO     | [job] job monitor thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:53,384 | INFO     | [payload] validate_pre thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:53,399 | INFO     | [payload] execute_payloads thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:53,744 | INFO     | [payload] control thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:53,750 | INFO     | [payload] validate_post thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:53,915 | INFO     | [job] control thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:54,477 | INFO     | [data] copytool_out thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:56,190 | INFO     | [data] queue_monitor thread has finished
[2025-03-12 11:34:05] 2025-03-12 10:33:56,503 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140400845408064)>', '<ExcThread(monitor, started 140400551499520)>']
[2025-03-12 11:34:05] 2025-03-12 10:33:57,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-12 11:34:05] 2025-03-12 10:33:57,382 | INFO     | [monitor] control thread has ended
[2025-03-12 11:34:05] 2025-03-12 10:34:01,530 | INFO     | all workflow threads have been joined
[2025-03-12 11:34:05] 2025-03-12 10:34:01,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-12 11:34:05] 2025-03-12 10:34:01,531 | INFO     | traces error code: 0
[2025-03-12 11:34:05] 2025-03-12 10:34:01,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-12 11:34:05] 2025-03-12 10:34:02,112 [wrapper] ==== pilot stdout END ====
[2025-03-12 11:34:05] 2025-03-12 10:34:02,209 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-12 11:34:05] 2025-03-12 10:34:02,338 [wrapper] pilotpid: 13814
[2025-03-12 11:34:05] 2025-03-12 10:34:02,406 [wrapper] Pilot exit status: 0
[2025-03-12 11:34:05] 2025-03-12 10:34:02,482 [wrapper] pandaids: 6551284797
[2025-03-12 11:34:05] 2025-03-12 10:34:02,547 [wrapper] cleanup supervisor_pilot 25099 13815
[2025-03-12 11:34:05] 2025-03-12 10:34:02,563 [wrapper] Test setup, not cleaning
[2025-03-12 11:34:05] 2025-03-12 10:34:02,580 [wrapper] apfmon messages muted
[2025-03-12 11:34:05] 2025-03-12 10:34:02,584 [wrapper] ==== wrapper stdout END ====
[2025-03-12 11:34:05] 2025-03-12 10:34:02,588 [wrapper] ==== wrapper stderr END ====
[2025-03-12 11:34:05]  *** Error codes and diagnostics ***
[2025-03-12 11:34:05]     "exeErrorCode": 0,
[2025-03-12 11:34:05]     "exeErrorDiag": "",
[2025-03-12 11:34:05]     "pilotErrorCode": 0,
[2025-03-12 11:34:05]     "pilotErrorDiag": "",
[2025-03-12 11:34:05]  *** Listing of results directory ***
[2025-03-12 11:34:05] total 431200
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc    491065 Mar 10 19:18 pilot3.tar.gz
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc      5118 Mar 10 19:21 queuedata.json
[2025-03-12 11:34:05] -rwx------. 1 boinc boinc     35865 Mar 10 19:21 runpilot2-wrapper.sh
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc       100 Mar 12 06:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-12 11:34:05] -rwxr-xr-x. 1 boinc boinc      7986 Mar 12 06:07 run_atlas
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc       105 Mar 12 06:07 job.xml
[2025-03-12 11:34:05] -rw-r--r--. 2 boinc boinc 269725391 Mar 12 06:07 EVNT.43558060._000001.pool.root.1
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc      6368 Mar 12 06:07 init_data.xml
[2025-03-12 11:34:05] -rw-r--r--. 2 boinc boinc     17569 Mar 12 06:07 start_atlas.sh
[2025-03-12 11:34:05] drwxrwx--x. 2 boinc boinc        68 Mar 12 06:07 shared
[2025-03-12 11:34:05] -rw-r--r--. 2 boinc boinc    503553 Mar 12 06:07 input.tar.gz
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc         0 Mar 12 06:07 boinc_lockfile
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc      2555 Mar 12 06:08 pandaJob.out
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc       424 Mar 12 06:08 setup.sh.local
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc    996444 Mar 12 06:08 agis_schedconf.cvmfs.json
[2025-03-12 11:34:05] drwx------. 4 boinc boinc      4096 Mar 12 06:08 pilot3
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc 163134844 Mar 12 11:30 HITS.43558062._000006.pool.root.1
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc       531 Mar 12 11:31 boinc_task_state.xml
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc      1015 Mar 12 11:31 memory_monitor_summary.json
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc   1589745 Mar 12 11:31 agis_ddmendpoints.agis.ALL.json
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc    484541 Mar 12 11:32 log.43558062._000006.job.log.tgz.1
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc      7672 Mar 12 11:33 heartbeat.json
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc        95 Mar 12 11:33 pilot_heartbeat.json
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc      4401 Mar 12 11:34 pilotlog.txt
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc   1958065 Mar 12 11:34 log.43558062._000006.job.log.1
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc       357 Mar 12 11:34 output.list
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc       620 Mar 12 11:34 runtime_log
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc   2457600 Mar 12 11:34 result.tar.gz
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc       657 Mar 12 11:34 sGMODmcvwB7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmSs0KDmmwXDyn.diag
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc     11013 Mar 12 11:34 runtime_log.err
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc      8192 Mar 12 11:34 boinc_mmap_file
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc        28 Mar 12 11:34 wrapper_checkpoint.txt
[2025-03-12 11:34:05] -rw-r--r--. 1 boinc boinc     21269 Mar 12 11:34 stderr.txt
[2025-03-12 11:34:05] HITS file was successfully produced:
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc 163134844 Mar 12 11:30 shared/HITS.pool.root.1
[2025-03-12 11:34:05]  *** Contents of shared directory: ***
[2025-03-12 11:34:05] total 425628
[2025-03-12 11:34:05] -rw-r--r--. 2 boinc boinc 269725391 Mar 12 06:07 ATLAS.root_0
[2025-03-12 11:34:05] -rw-r--r--. 2 boinc boinc     17569 Mar 12 06:07 start_atlas.sh
[2025-03-12 11:34:05] -rw-r--r--. 2 boinc boinc    503553 Mar 12 06:07 input.tar.gz
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc 163134844 Mar 12 11:30 HITS.pool.root.1
[2025-03-12 11:34:05] -rw-------. 1 boinc boinc   2457600 Mar 12 11:34 result.tar.gz
11:34:07 (8561): run_atlas exited; CPU time 69886.848798
11:34:07 (8561): called boinc_finish(0)

</stderr_txt>
]]>

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