Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:38:50 (1787338): wrapper (7.7.26015): starting
13:38:50 (1787338): wrapper: running run_atlas (--nthreads 8)
[2025-03-09 13:38:50] Arguments: --nthreads 8
[2025-03-09 13:38:50] Threads: 8
[2025-03-09 13:38:50] Checking for CVMFS
[2025-03-09 13:38:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-09 13:38:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-09 13:38:50] Running cvmfs_config stat atlas.cern.ch
[2025-03-09 13:38:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-09 13:38:50] 2.12.6.0 3794790 37893 355968 143493 3 425 27430144 37641217 32281 130560 0 4401793 99.602 5568902 31001 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-03-09 13:38:50] CVMFS is ok
[2025-03-09 13:38:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-09 13:38:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-09 13:38:50] Further information can be found at the LHC@home message board.
[2025-03-09 13:38:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-09 13:38:50] Checking for apptainer binary...
[2025-03-09 13:38:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-09 13:38:50] Running /usr/bin/apptainer --version
[2025-03-09 13:38:50] apptainer version 1.3.6-1.el9
[2025-03-09 13:38:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-09 13:38:50] c6-2-11-1.aglt2.org
[2025-03-09 13:38:50] apptainer works
[2025-03-09 13:38:50] Set ATHENA_PROC_NUMBER=8
[2025-03-09 13:38:50] Set ATHENA_CORE_NUMBER=8
[2025-03-09 13:38:50] Starting ATLAS job with PandaID=6549584379
[2025-03-09 13:38:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-09 16:00:02]  *** The last 200 lines of the pilot log: ***
[2025-03-09 16:00:02] 2025-03-09 19:59:43,652 | INFO     | -- intersect: -151684316436.69348
[2025-03-09 16:00:02] 2025-03-09 19:59:43,652 | INFO     | intersect: -151684316436.69348
[2025-03-09 16:00:02] 2025-03-09 19:59:43,653 | INFO     | chi2: 4.854253217465759
[2025-03-09 16:00:02] 2025-03-09 19:59:43,653 | INFO     | current chi2=4.854253217465759 (change=0.5977620527188209 %)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,653 | INFO     | right removable region: 132
[2025-03-09 16:00:02] 2025-03-09 19:59:43,653 | INFO     | model: linear, x: [1741542265.0, 1741542326.0, 1741542387.0, 1741542448.0, 1741542509.0, 1741542570.0, 1741542631.0, 1741542692.0, 1741542753.0, 1741542814.0, 1741
[2025-03-09 16:00:02] 2025-03-09 19:59:43,653 | INFO     | sum of square deviations: 729472282.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,654 | INFO     | sum of deviations: 35251817345.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,654 | INFO     | mean x: 1741546291.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,654 | INFO     | mean y: 2120670.661654135
[2025-03-09 16:00:02] 2025-03-09 19:59:43,654 | INFO     | -- intersect: -84158269330.5505
[2025-03-09 16:00:02] 2025-03-09 19:59:43,654 | INFO     | intersect: -84158269330.5505
[2025-03-09 16:00:02] 2025-03-09 19:59:43,654 | INFO     | chi2: 2.2119851629086065
[2025-03-09 16:00:02] 2025-03-09 19:59:43,655 | INFO     | current chi2=2.2119851629086065 (change=54.70440752695494 %)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,655 | INFO     | model: linear, x: [1741542570.0, 1741542631.0, 1741542692.0, 1741542753.0, 1741542814.0, 1741542875.0, 1741542936.0, 1741542997.0, 1741543058.0, 1741543119.0, 1741
[2025-03-09 16:00:02] 2025-03-09 19:59:43,655 | INFO     | sum of square deviations: 650252192.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,655 | INFO     | sum of deviations: 11580334946.5
[2025-03-09 16:00:02] 2025-03-09 19:59:43,656 | INFO     | mean x: 1741546443.5
[2025-03-09 16:00:02] 2025-03-09 19:59:43,656 | INFO     | mean y: 2166277.1171875
[2025-03-09 16:00:02] 2025-03-09 19:59:43,656 | INFO     | -- intersect: -31013017352.768734
[2025-03-09 16:00:02] 2025-03-09 19:59:43,656 | INFO     | intersect: -31013017352.768734
[2025-03-09 16:00:02] 2025-03-09 19:59:43,656 | INFO     | chi2: 0.6541788008661987
[2025-03-09 16:00:02] 2025-03-09 19:59:43,656 | INFO     | current chi2=0.6541788008661987 (change=70.42571479069059 %)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,656 | INFO     | model: linear, x: [1741542875.0, 1741542936.0, 1741542997.0, 1741543058.0, 1741543119.0, 1741543180.0, 1741543241.0, 1741543302.0, 1741543363.0, 1741543424.0, 1741
[2025-03-09 16:00:02] 2025-03-09 19:59:43,656 | INFO     | sum of square deviations: 576985702.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,657 | INFO     | sum of deviations: -1307351146.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,657 | INFO     | mean x: 1741546596.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,657 | INFO     | mean y: 2192794.487804878
[2025-03-09 16:00:02] 2025-03-09 19:59:43,657 | INFO     | -- intersect: 3948240209.8759236
[2025-03-09 16:00:02] 2025-03-09 19:59:43,657 | INFO     | intersect: 3948240209.8759236
[2025-03-09 16:00:02] 2025-03-09 19:59:43,658 | INFO     | chi2: 0.02969156966304337
[2025-03-09 16:00:02] 2025-03-09 19:59:43,658 | INFO     | current chi2=0.02969156966304337 (change=95.46124551518197 %)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,658 | INFO     | model: linear, x: [1741543180.0, 1741543241.0, 1741543302.0, 1741543363.0, 1741543424.0, 1741543485.0, 1741543546.0, 1741543607.0, 1741543668.0, 1741543729.0, 1741
[2025-03-09 16:00:02] 2025-03-09 19:59:43,658 | INFO     | sum of square deviations: 509440249.5
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | sum of deviations: -1511103162.9999998
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | mean x: 1741546748.5
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | mean y: 2193233.4576271186
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | -- intersect: 5167974309.36124
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | intersect: 5167974309.36124
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | chi2: 0.028303946414647205
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | current chi2=0.028303946414647205 (change=4.673458709471054 %)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | left removable region: 40
[2025-03-09 16:00:02] 2025-03-09 19:59:43,659 | INFO     | model: linear, x: [1741544400.0, 1741544461.0, 1741544522.0, 1741544583.0, 1741544644.0, 1741544705.0, 1741544766.0, 1741544827.0, 1741544888.0, 1741544949.0, 1741
[2025-03-09 16:00:02] 2025-03-09 19:59:43,660 | INFO     | sum of square deviations: 241429643.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,660 | INFO     | sum of deviations: 913652388.0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,660 | INFO     | mean x: 1741547175.5
[2025-03-09 16:00:02] 2025-03-09 19:59:43,660 | INFO     | mean y: 2190671.4565217393
[2025-03-09 16:00:02] 2025-03-09 19:59:43,660 | INFO     | -- intersect: -6588419810.083352
[2025-03-09 16:00:02] 2025-03-09 19:59:43,660 | INFO     | intersect: -6588419810.083352
[2025-03-09 16:00:02] 2025-03-09 19:59:43,661 | INFO     | chi2: 0.012971393278950586
[2025-03-09 16:00:02] 2025-03-09 19:59:43,661 | INFO     | -- intersect: -6588419810.083352
[2025-03-09 16:00:02] 2025-03-09 19:59:43,661 | INFO     | current memory leak: 3.78 B/s (using 92 data points, chi2=0.01)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,661 | INFO     | ..............................
[2025-03-09 16:00:02] 2025-03-09 19:59:43,661 | INFO     | . Timing measurements:
[2025-03-09 16:00:02] 2025-03-09 19:59:43,662 | INFO     | . get job = 0 s
[2025-03-09 16:00:02] 2025-03-09 19:59:43,662 | INFO     | . initial setup = 2 s
[2025-03-09 16:00:02] 2025-03-09 19:59:43,662 | INFO     | . payload setup = 3 s
[2025-03-09 16:00:02] 2025-03-09 19:59:43,662 | INFO     | . stage-in = 0 s
[2025-03-09 16:00:02] 2025-03-09 19:59:43,662 | INFO     | . payload execution = 8415 s
[2025-03-09 16:00:02] 2025-03-09 19:59:43,662 | INFO     | . stage-out = 1 s
[2025-03-09 16:00:02] 2025-03-09 19:59:43,662 | INFO     | . log creation = 0 s
[2025-03-09 16:00:02] 2025-03-09 19:59:43,662 | INFO     | ..............................
[2025-03-09 16:00:02] 2025-03-09 19:59:43,779 | INFO     | 
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | job summary report
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | --------------------------------------------------
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | PanDA job id: 6549584379
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | task id: 43558449
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | errors: (none)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | pilot state: finished 
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | transexitcode: 0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | exeerrorcode: 0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,780 | INFO     | exeerrordiag: 
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | exitcode: 0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | exitmsg: OK
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | cpuconsumptiontime: 57291 s
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | nevents: 400
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | neventsw: 0
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | pid: 1814555
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | pgrp: 1814555
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | corecount: 8
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | event service: False
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | sizes: {0: 2378151, 1: 2378406, 4: 2378612, 11: 2378640, 8422: 2406338, 8423: 2415279, 8425: 2415463, 8431: 2415633}
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | --------------------------------------------------
[2025-03-09 16:00:02] 2025-03-09 19:59:43,781 | INFO     | 
[2025-03-09 16:00:02] 2025-03-09 19:59:43,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-03-09 16:00:02] 2025-03-09 19:59:43,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,815 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,817 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,817 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,817 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-09 16:00:02] 2025-03-09 19:59:43,817 | INFO     | job 6549584379 has completed (purged errors)
[2025-03-09 16:00:02] 2025-03-09 19:59:43,817 | INFO     | overall cleanup function is called
[2025-03-09 16:00:02] 2025-03-09 19:59:43,938 | WARNING  | process 1814555 can no longer be monitored (due to stat problems) - aborting
[2025-03-09 16:00:02] 2025-03-09 19:59:44,341 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-03-09 16:00:02] 2025-03-09 19:59:44,662 | INFO     | number of running child processes to parent process 1814555: 1
[2025-03-09 16:00:02] 2025-03-09 19:59:44,662 | INFO     | maximum number of monitored processes: 6
[2025-03-09 16:00:02] 2025-03-09 19:59:44,662 | INFO     | aborting job monitoring since job object (job id=6549584379) has expired
[2025-03-09 16:00:02] 2025-03-09 19:59:44,825 | INFO     | --- collectZombieJob: --- 10, [1814555]
[2025-03-09 16:00:02] 2025-03-09 19:59:44,825 | INFO     | zombie collector waiting for pid 1814555
[2025-03-09 16:00:02] 2025-03-09 19:59:44,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-09 16:00:02] 2025-03-09 19:59:44,825 | INFO     | collected zombie processes
[2025-03-09 16:00:02] 2025-03-09 19:59:44,825 | INFO     | will attempt to kill all subprocesses of pid=1814555
[2025-03-09 16:00:02] 2025-03-09 19:59:45,087 | INFO     | process IDs to be killed: [1814555] (in reverse order)
[2025-03-09 16:00:02] 2025-03-09 19:59:45,237 | WARNING  | found no corresponding commands to process id(s)
[2025-03-09 16:00:02] 2025-03-09 19:59:45,237 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-09 16:00:02] 2025-03-09 19:59:45,256 | INFO     | did not find any defunct processes belonging to 1814555
[2025-03-09 16:00:02] 2025-03-09 19:59:45,274 | INFO     | did not find any defunct processes belonging to 1814555
[2025-03-09 16:00:02] 2025-03-09 19:59:45,274 | INFO     | ready for new job
[2025-03-09 16:00:02] 2025-03-09 19:59:45,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-09 16:00:02] 2025-03-09 19:59:45,276 | INFO     | **************************************
[2025-03-09 16:00:02] 2025-03-09 19:59:45,276 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-03-09 16:00:02] 2025-03-09 19:59:45,276 | INFO     | **************************************
[2025-03-09 16:00:02] 2025-03-09 19:59:45,276 | INFO     | 
[2025-03-09 16:00:02] 2025-03-09 19:59:45,294 | INFO     | architecture information:
[2025-03-09 16:00:02] 2025-03-09 19:59:45,294 | INFO     | executing command: cat /etc/os-release
[2025-03-09 16:00:02] 2025-03-09 19:59:45,309 | INFO     | cat /etc/os-release:
[2025-03-09 16:00:02] NAME="CentOS Linux"
[2025-03-09 16:00:02] VERSION="7 (Core)"
[2025-03-09 16:00:02] ID="centos"
[2025-03-09 16:00:02] ID_LIKE="rhel fedora"
[2025-03-09 16:00:02] VERSION_ID="7"
[2025-03-09 16:00:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-09 16:00:02] ANSI_COLOR="0;31"
[2025-03-09 16:00:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-09 16:00:02] HOME_URL="https://www.centos.org/"
[2025-03-09 16:00:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-09 16:00:02] 
[2025-03-09 16:00:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-09 16:00:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-09 16:00:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-09 16:00:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-09 16:00:02] 
[2025-03-09 16:00:02] 2025-03-09 19:59:45,309 | INFO     | **************************************
[2025-03-09 16:00:02] 2025-03-09 19:59:45,811 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-03-09 16:00:02] 2025-03-09 19:59:45,827 | INFO     | sufficient remaining disk space (93126131712 B)
[2025-03-09 16:00:02] 2025-03-09 19:59:45,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-09 16:00:02] 2025-03-09 19:59:45,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-09 16:00:02] 2025-03-09 19:59:45,828 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-09 16:00:02] 2025-03-09 19:59:45,828 | INFO     | aborting loop
[2025-03-09 16:00:02] 2025-03-09 19:59:46,165 | INFO     | all payload control threads have been joined
[2025-03-09 16:00:02] 2025-03-09 19:59:46,244 | INFO     | all data control threads have been joined
[2025-03-09 16:00:02] 2025-03-09 19:59:46,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-09 16:00:02] 2025-03-09 19:59:46,833 | INFO     | [job] retrieve thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:46,834 | INFO     | [job] job monitor thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:46,925 | INFO     | [job] create_data_payload thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:46,958 | INFO     | [job] validate thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:47,069 | INFO     | PID=1791838 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-03-09 16:00:02] 2025-03-09 19:59:47,070 | INFO     | .. there are 53 such processes running
[2025-03-09 16:00:02] 2025-03-09 19:59:47,070 | INFO     | found 0 job(s) in 20 queues
[2025-03-09 16:00:02] 2025-03-09 19:59:47,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-09 16:00:02] 2025-03-09 19:59:47,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-09 16:00:02] 2025-03-09 19:59:47,170 | INFO     | [payload] control thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:47,250 | INFO     | [data] control thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:47,262 | INFO     | [payload] validate_post thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:47,263 | INFO     | [data] copytool_in thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:47,284 | INFO     | [payload] validate_pre thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:47,463 | INFO     | all job control threads have been joined
[2025-03-09 16:00:02] 2025-03-09 19:59:47,718 | INFO     | [payload] failed_post thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:47,914 | INFO     | [payload] execute_payloads thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:48,469 | INFO     | [job] control thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:48,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-09 16:00:02] 2025-03-09 19:59:48,646 | INFO     | [data] copytool_out thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:48,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-09 16:00:02] 2025-03-09 19:59:49,801 | INFO     | [job] queue monitor thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:52,522 | INFO     | [data] queue_monitor thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:56,403 | INFO     | job.realtimelogging is not enabled
[2025-03-09 16:00:02] 2025-03-09 19:59:57,409 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-09 16:00:02] 2025-03-09 19:59:57,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975120254784)>', '<ExcThread(monitor, started 139974091454208)>']
[2025-03-09 16:00:02] 2025-03-09 19:59:58,129 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-09 16:00:02] 2025-03-09 19:59:58,130 | INFO     | [monitor] control thread has ended
[2025-03-09 16:00:02] 2025-03-09 20:00:02,480 | INFO     | all workflow threads have been joined
[2025-03-09 16:00:02] 2025-03-09 20:00:02,480 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-09 16:00:02] 2025-03-09 20:00:02,481 | INFO     | traces error code: 0
[2025-03-09 16:00:02] 2025-03-09 20:00:02,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-09 16:00:02] 2025-03-09 20:00:02,652 [wrapper] ==== pilot stdout END ====
[2025-03-09 16:00:02] 2025-03-09 20:00:02,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-09 16:00:02] 2025-03-09 20:00:02,657 [wrapper] pilotpid: 1791838
[2025-03-09 16:00:02] 2025-03-09 20:00:02,659 [wrapper] Pilot exit status: 0
[2025-03-09 16:00:02] 2025-03-09 20:00:02,670 [wrapper] pandaids: 6549584379
[2025-03-09 16:00:02] 2025-03-09 20:00:02,774 [wrapper] cleanup supervisor_pilot 3082158 1791839
[2025-03-09 16:00:02] 2025-03-09 20:00:02,777 [wrapper] Test setup, not cleaning
[2025-03-09 16:00:02] 2025-03-09 20:00:02,782 [wrapper] apfmon messages muted
[2025-03-09 16:00:02] 2025-03-09 20:00:02,785 [wrapper] ==== wrapper stdout END ====
[2025-03-09 16:00:02] 2025-03-09 20:00:02,789 [wrapper] ==== wrapper stderr END ====
[2025-03-09 16:00:02]  *** Error codes and diagnostics ***
[2025-03-09 16:00:02]     "exeErrorCode": 0,
[2025-03-09 16:00:02]     "exeErrorDiag": "",
[2025-03-09 16:00:02]     "pilotErrorCode": 0,
[2025-03-09 16:00:02]     "pilotErrorDiag": "",
[2025-03-09 16:00:02]  *** Listing of results directory ***
[2025-03-09 16:00:02] total 429288
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas    491065 Mar  9 13:32 pilot3.tar.gz
[2025-03-09 16:00:02] -rwx------. 1 boincer umatlas     35865 Mar  9 13:36 runpilot2-wrapper.sh
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas      5118 Mar  9 13:36 queuedata.json
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas       100 Mar  9 13:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-09 16:00:02] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 13:38 run_atlas
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas       105 Mar  9 13:38 job.xml
[2025-03-09 16:00:02] -rw-r--r--. 2 boincer umatlas 248647415 Mar  9 13:38 EVNT.43558447._000018.pool.root.1
[2025-03-09 16:00:02] -rw-r--r--. 2 boincer umatlas     17569 Mar  9 13:38 start_atlas.sh
[2025-03-09 16:00:02] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 13:38 shared
[2025-03-09 16:00:02] -rw-r--r--. 2 boincer umatlas    503553 Mar  9 13:38 input.tar.gz
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas         0 Mar  9 13:38 boinc_lockfile
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas      2557 Mar  9 13:38 pandaJob.out
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas       467 Mar  9 13:38 setup.sh.local
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas    992355 Mar  9 13:38 agis_schedconf.cvmfs.json
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas   1579410 Mar  9 13:38 agis_ddmendpoints.agis.ALL.json
[2025-03-09 16:00:02] drwx------. 4 boincer umatlas      4096 Mar  9 13:38 pilot3
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas      6855 Mar  9 15:55 init_data.xml
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas 184821532 Mar  9 15:58 HITS.43558449._000445.pool.root.1
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas       529 Mar  9 15:58 boinc_task_state.xml
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas        95 Mar  9 15:59 pilot_heartbeat.json
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas      1036 Mar  9 15:59 memory_monitor_summary.json
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas    343576 Mar  9 15:59 log.43558449._000445.job.log.tgz.1
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas      7719 Mar  9 15:59 heartbeat.json
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 16:00 boinc_mmap_file
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas        27 Mar  9 16:00 wrapper_checkpoint.txt
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas      4683 Mar  9 16:00 pilotlog.txt
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas    816774 Mar  9 16:00 log.43558449._000445.job.log.1
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas       357 Mar  9 16:00 output.list
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas       620 Mar  9 16:00 runtime_log
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas   1177600 Mar  9 16:00 result.tar.gz
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas     11423 Mar  9 16:00 runtime_log.err
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas       653 Mar  9 16:00 j1gLDmWkZB7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYj0KDmOxuBrm.diag
[2025-03-09 16:00:02] -rw-r--r--. 1 boincer umatlas     21690 Mar  9 16:00 stderr.txt
[2025-03-09 16:00:02] HITS file was successfully produced:
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas 184821532 Mar  9 15:58 shared/HITS.pool.root.1
[2025-03-09 16:00:02]  *** Contents of shared directory: ***
[2025-03-09 16:00:02] total 424980
[2025-03-09 16:00:02] -rw-r--r--. 2 boincer umatlas 248647415 Mar  9 13:38 ATLAS.root_0
[2025-03-09 16:00:02] -rw-r--r--. 2 boincer umatlas     17569 Mar  9 13:38 start_atlas.sh
[2025-03-09 16:00:02] -rw-r--r--. 2 boincer umatlas    503553 Mar  9 13:38 input.tar.gz
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas 184821532 Mar  9 15:58 HITS.pool.root.1
[2025-03-09 16:00:02] -rw-------. 1 boincer umatlas   1177600 Mar  9 16:00 result.tar.gz
16:00:04 (1787338): run_atlas exited; CPU time 57337.351783
16:00:04 (1787338): called boinc_finish(0)

</stderr_txt>
]]>

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