Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:37:04 (762956): wrapper (7.7.26015): starting
13:37:04 (762956): wrapper: running run_atlas (--nthreads 8)
[2025-03-09 13:37:04] Arguments: --nthreads 8
[2025-03-09 13:37:04] Threads: 8
[2025-03-09 13:37:04] Checking for CVMFS
[2025-03-09 13:37:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-09 13:37:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-09 13:37:04] Running cvmfs_config stat atlas.cern.ch
[2025-03-09 13:37:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-09 13:37:04] 2.12.6.0 2898667 14311 326020 143493 0 192 12889253 37641216 25074 130560 0 1569458 99.084 3662394 24562 http://cvmfs-egi.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-03-09 13:37:04] CVMFS is ok
[2025-03-09 13:37:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-09 13:37:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-09 13:37:04] Further information can be found at the LHC@home message board.
[2025-03-09 13:37:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-09 13:37:04] Checking for apptainer binary...
[2025-03-09 13:37:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-09 13:37:04] Running /usr/bin/apptainer --version
[2025-03-09 13:37:04] apptainer version 1.3.6-1.el9
[2025-03-09 13:37:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-09 13:37:04] c6-12-27-4.aglt2.org
[2025-03-09 13:37:04] apptainer works
[2025-03-09 13:37:04] Set ATHENA_PROC_NUMBER=8
[2025-03-09 13:37:04] Set ATHENA_CORE_NUMBER=8
[2025-03-09 13:37:04] Starting ATLAS job with PandaID=6549584376
[2025-03-09 13:37:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-09 16:58:16]  *** The last 200 lines of the pilot log: ***
[2025-03-09 16:58:16] 2025-03-09 20:58:01,277 | INFO     | chi2: 4.939602049932116
[2025-03-09 16:58:16] 2025-03-09 20:58:01,277 | INFO     | model: linear, x: [1741541858.0, 1741541919.0, 1741541980.0, 1741542041.0, 1741542102.0, 1741542163.0, 1741542224.0, 1741542285.0, 1741542346.0, 1741542407.0, 1741
[2025-03-09 16:58:16] 2025-03-09 20:58:01,277 | INFO     | sum of square deviations: 2194679229.9791617
[2025-03-09 16:58:16] 2025-03-09 20:58:01,278 | INFO     | sum of deviations: 96167469739.0417
[2025-03-09 16:58:16] 2025-03-09 20:58:01,279 | INFO     | mean x: 1741547683.5104167
[2025-03-09 16:58:16] 2025-03-09 20:58:01,279 | INFO     | mean y: 2065756.9791666667
[2025-03-09 16:58:16] 2025-03-09 20:58:01,279 | INFO     | -- intersect: -76309876264.12265
[2025-03-09 16:58:16] 2025-03-09 20:58:01,279 | INFO     | intersect: -76309876264.12265
[2025-03-09 16:58:16] 2025-03-09 20:58:01,279 | INFO     | chi2: 4.9167231108555685
[2025-03-09 16:58:16] 2025-03-09 20:58:01,279 | INFO     | current chi2=4.9167231108555685 (change=0.46317373029801073 %)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,279 | INFO     | right removable region: 191
[2025-03-09 16:58:16] 2025-03-09 20:58:01,280 | INFO     | model: linear, x: [1741542163.0, 1741542224.0, 1741542285.0, 1741542346.0, 1741542407.0, 1741542468.0, 1741542529.0, 1741542590.0, 1741542651.0, 1741542712.0, 1741
[2025-03-09 16:58:16] 2025-03-09 20:58:01,280 | INFO     | sum of square deviations: 2194678009.9791617
[2025-03-09 16:58:16] 2025-03-09 20:58:01,281 | INFO     | sum of deviations: 54885678521.55211
[2025-03-09 16:58:16] 2025-03-09 20:58:01,281 | INFO     | mean x: 1741547988.5104167
[2025-03-09 16:58:16] 2025-03-09 20:58:01,281 | INFO     | mean y: 2102972.9739583335
[2025-03-09 16:58:16] 2025-03-09 20:58:01,281 | INFO     | -- intersect: -43551458229.44864
[2025-03-09 16:58:16] 2025-03-09 20:58:01,281 | INFO     | intersect: -43551458229.44864
[2025-03-09 16:58:16] 2025-03-09 20:58:01,282 | INFO     | chi2: 2.34149247375746
[2025-03-09 16:58:16] 2025-03-09 20:58:01,282 | INFO     | current chi2=2.34149247375746 (change=52.59754834319824 %)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,282 | INFO     | model: linear, x: [1741542468.0, 1741542529.0, 1741542590.0, 1741542651.0, 1741542712.0, 1741542773.0, 1741542834.0, 1741542895.0, 1741542956.0, 1741543017.0, 1741
[2025-03-09 16:58:16] 2025-03-09 20:58:01,282 | INFO     | sum of square deviations: 2027641709.9786184
[2025-03-09 16:58:16] 2025-03-09 20:58:01,283 | INFO     | sum of deviations: 22487967699.96791
[2025-03-09 16:58:16] 2025-03-09 20:58:01,284 | INFO     | mean x: 1741548141.0106952
[2025-03-09 16:58:16] 2025-03-09 20:58:01,284 | INFO     | mean y: 2132557.0160427806
[2025-03-09 16:58:16] 2025-03-09 20:58:01,284 | INFO     | -- intersect: -19312856945.44426
[2025-03-09 16:58:16] 2025-03-09 20:58:01,284 | INFO     | intersect: -19312856945.44426
[2025-03-09 16:58:16] 2025-03-09 20:58:01,284 | INFO     | chi2: 0.9305275544146236
[2025-03-09 16:58:16] 2025-03-09 20:58:01,284 | INFO     | current chi2=0.9305275544146236 (change=60.25921223990187 %)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,284 | INFO     | model: linear, x: [1741542773.0, 1741542834.0, 1741542895.0, 1741542956.0, 1741543017.0, 1741543078.0, 1741543139.0, 1741543200.0, 1741543261.0, 1741543322.0, 1741
[2025-03-09 16:58:16] 2025-03-09 20:58:01,285 | INFO     | sum of square deviations: 1869303247.478017
[2025-03-09 16:58:16] 2025-03-09 20:58:01,286 | INFO     | sum of deviations: -820477228.1868126
[2025-03-09 16:58:16] 2025-03-09 20:58:01,286 | INFO     | mean x: 1741548293.510989
[2025-03-09 16:58:16] 2025-03-09 20:58:01,286 | INFO     | mean y: 2154869.5934065934
[2025-03-09 16:58:16] 2025-03-09 20:58:01,286 | INFO     | -- intersect: 766557712.4928563
[2025-03-09 16:58:16] 2025-03-09 20:58:01,286 | INFO     | intersect: 766557712.4928563
[2025-03-09 16:58:16] 2025-03-09 20:58:01,286 | INFO     | chi2: 0.057093454572059416
[2025-03-09 16:58:16] 2025-03-09 20:58:01,286 | INFO     | current chi2=0.057093454572059416 (change=93.86439936128751 %)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,287 | INFO     | model: linear, x: [1741543078.0, 1741543139.0, 1741543200.0, 1741543261.0, 1741543322.0, 1741543383.0, 1741543444.0, 1741543505.0, 1741543566.0, 1741543627.0, 1741
[2025-03-09 16:58:16] 2025-03-09 20:58:01,287 | INFO     | sum of square deviations: 1719430059.9774046
[2025-03-09 16:58:16] 2025-03-09 20:58:01,288 | INFO     | sum of deviations: -2025203726.090396
[2025-03-09 16:58:16] 2025-03-09 20:58:01,288 | INFO     | mean x: 1741548446.0112994
[2025-03-09 16:58:16] 2025-03-09 20:58:01,288 | INFO     | mean y: 2156081.04519774
[2025-03-09 16:58:16] 2025-03-09 20:58:01,288 | INFO     | -- intersect: 2053411601.188524
[2025-03-09 16:58:16] 2025-03-09 20:58:01,288 | INFO     | intersect: 2053411601.188524
[2025-03-09 16:58:16] 2025-03-09 20:58:01,289 | INFO     | chi2: 0.052858054353699335
[2025-03-09 16:58:16] 2025-03-09 20:58:01,289 | INFO     | current chi2=0.052858054353699335 (change=7.418363891458784 %)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,289 | INFO     | left removable region: 40
[2025-03-09 16:58:16] 2025-03-09 20:58:01,289 | INFO     | model: linear, x: [1741544298.0, 1741544359.0, 1741544420.0, 1741544481.0, 1741544542.0, 1741544603.0, 1741544664.0, 1741544725.0, 1741544786.0, 1741544847.0, 1741
[2025-03-09 16:58:16] 2025-03-09 20:58:01,289 | INFO     | sum of square deviations: 1067553803.9735115
[2025-03-09 16:58:16] 2025-03-09 20:58:01,290 | INFO     | sum of deviations: 1978756343.7483444
[2025-03-09 16:58:16] 2025-03-09 20:58:01,290 | INFO     | mean x: 1741548873.013245
[2025-03-09 16:58:16] 2025-03-09 20:58:01,290 | INFO     | mean y: 2155176.1258278145
[2025-03-09 16:58:16] 2025-03-09 20:58:01,290 | INFO     | -- intersect: -3225879671.013591
[2025-03-09 16:58:16] 2025-03-09 20:58:01,290 | INFO     | intersect: -3225879671.013591
[2025-03-09 16:58:16] 2025-03-09 20:58:01,291 | INFO     | chi2: 0.03591074926015465
[2025-03-09 16:58:16] 2025-03-09 20:58:01,291 | INFO     | -- intersect: -3225879671.013591
[2025-03-09 16:58:16] 2025-03-09 20:58:01,291 | INFO     | current memory leak: 1.85 B/s (using 151 data points, chi2=0.04)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | ..............................
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | . Timing measurements:
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | . get job = 0 s
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | . initial setup = 2 s
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | . payload setup = 4 s
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | . stage-in = 0 s
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | . payload execution = 12010 s
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | . stage-out = 2 s
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | . log creation = 0 s
[2025-03-09 16:58:16] 2025-03-09 20:58:01,292 | INFO     | ..............................
[2025-03-09 16:58:16] 2025-03-09 20:58:01,866 | INFO     | 
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | job summary report
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | --------------------------------------------------
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | PanDA job id: 6549584376
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | task id: 43558449
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | errors: (none)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | pilot state: finished 
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | transexitcode: 0
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | exeerrorcode: 0
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | exeerrordiag: 
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | exitcode: 0
[2025-03-09 16:58:16] 2025-03-09 20:58:01,867 | INFO     | exitmsg: OK
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | cpuconsumptiontime: 58400 s
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | nevents: 400
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | neventsw: 0
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | pid: 817276
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | pgrp: 817276
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | corecount: 8
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | event service: False
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | sizes: {0: 2378378, 4: 2378584, 11: 2378612, 12020: 2408194, 12023: 2417191, 12033: 2417305}
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | --------------------------------------------------
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | 
[2025-03-09 16:58:16] 2025-03-09 20:58:01,868 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-03-09 16:58:16] 2025-03-09 20:58:01,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-09 16:58:16] 2025-03-09 20:58:01,936 | INFO     | job 6549584376 has completed (purged errors)
[2025-03-09 16:58:16] 2025-03-09 20:58:01,936 | INFO     | overall cleanup function is called
[2025-03-09 16:58:16] 2025-03-09 20:58:02,983 | INFO     | --- collectZombieJob: --- 10, [817276]
[2025-03-09 16:58:16] 2025-03-09 20:58:02,984 | INFO     | zombie collector waiting for pid 817276
[2025-03-09 16:58:16] 2025-03-09 20:58:02,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-09 16:58:16] 2025-03-09 20:58:02,984 | INFO     | collected zombie processes
[2025-03-09 16:58:16] 2025-03-09 20:58:02,984 | INFO     | will attempt to kill all subprocesses of pid=817276
[2025-03-09 16:58:16] 2025-03-09 20:58:03,327 | INFO     | process IDs to be killed: [817276] (in reverse order)
[2025-03-09 16:58:16] 2025-03-09 20:58:03,492 | WARNING  | found no corresponding commands to process id(s)
[2025-03-09 16:58:16] 2025-03-09 20:58:03,492 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-09 16:58:16] 2025-03-09 20:58:03,514 | INFO     | did not find any defunct processes belonging to 817276
[2025-03-09 16:58:16] 2025-03-09 20:58:03,536 | INFO     | did not find any defunct processes belonging to 817276
[2025-03-09 16:58:16] 2025-03-09 20:58:03,536 | INFO     | ready for new job
[2025-03-09 16:58:16] 2025-03-09 20:58:03,536 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-09 16:58:16] 2025-03-09 20:58:03,538 | INFO     | **************************************
[2025-03-09 16:58:16] 2025-03-09 20:58:03,538 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-03-09 16:58:16] 2025-03-09 20:58:03,538 | INFO     | **************************************
[2025-03-09 16:58:16] 2025-03-09 20:58:03,538 | INFO     | 
[2025-03-09 16:58:16] 2025-03-09 20:58:03,557 | INFO     | architecture information:
[2025-03-09 16:58:16] 2025-03-09 20:58:03,557 | INFO     | executing command: cat /etc/os-release
[2025-03-09 16:58:16] 2025-03-09 20:58:03,577 | INFO     | cat /etc/os-release:
[2025-03-09 16:58:16] NAME="CentOS Linux"
[2025-03-09 16:58:16] VERSION="7 (Core)"
[2025-03-09 16:58:16] ID="centos"
[2025-03-09 16:58:16] ID_LIKE="rhel fedora"
[2025-03-09 16:58:16] VERSION_ID="7"
[2025-03-09 16:58:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-09 16:58:16] ANSI_COLOR="0;31"
[2025-03-09 16:58:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-09 16:58:16] HOME_URL="https://www.centos.org/"
[2025-03-09 16:58:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-09 16:58:16] 
[2025-03-09 16:58:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-09 16:58:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-09 16:58:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-09 16:58:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-09 16:58:16] 
[2025-03-09 16:58:16] 2025-03-09 20:58:03,577 | INFO     | **************************************
[2025-03-09 16:58:16] 2025-03-09 20:58:04,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-03-09 16:58:16] 2025-03-09 20:58:04,103 | INFO     | sufficient remaining disk space (93007642624 B)
[2025-03-09 16:58:16] 2025-03-09 20:58:04,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-09 16:58:16] 2025-03-09 20:58:04,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-09 16:58:16] 2025-03-09 20:58:04,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-09 16:58:16] 2025-03-09 20:58:04,114 | INFO     | aborting loop
[2025-03-09 16:58:16] 2025-03-09 20:58:04,120 | INFO     | all data control threads have been joined
[2025-03-09 16:58:16] 2025-03-09 20:58:04,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-09 16:58:16] 2025-03-09 20:58:04,558 | INFO     | all job control threads have been joined
[2025-03-09 16:58:16] 2025-03-09 20:58:05,102 | INFO     | PID=779773 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-03-09 16:58:16] 2025-03-09 20:58:05,102 | INFO     | .. there are 50 such processes running
[2025-03-09 16:58:16] 2025-03-09 20:58:05,102 | INFO     | found 0 job(s) in 20 queues
[2025-03-09 16:58:16] 2025-03-09 20:58:05,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-09 16:58:16] 2025-03-09 20:58:05,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-09 16:58:16] 2025-03-09 20:58:05,109 | INFO     | [job] retrieve thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:05,120 | INFO     | [job] job monitor thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:05,126 | INFO     | [data] control thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:05,140 | INFO     | [payload] validate_pre thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:05,154 | INFO     | all payload control threads have been joined
[2025-03-09 16:58:16] 2025-03-09 20:58:05,390 | INFO     | [job] create_data_payload thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:05,579 | INFO     | [job] control thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:05,630 | INFO     | [data] copytool_in thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:05,915 | INFO     | [payload] validate_post thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:06,115 | INFO     | [payload] execute_payloads thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:06,132 | INFO     | [payload] failed_post thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:06,160 | INFO     | [payload] control thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:06,331 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:06,542 | INFO     | [data] copytool_out thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:06,580 | INFO     | [job] validate thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:06,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-09 16:58:16] 2025-03-09 20:58:06,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-09 16:58:16] 2025-03-09 20:58:07,737 | INFO     | [job] queue monitor thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:10,648 | INFO     | [data] queue_monitor thread has finished
[2025-03-09 16:58:16] 2025-03-09 20:58:10,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140221435950912)>', '<ExcThread(monitor, started 140220674598656)>']
[2025-03-09 16:58:16] 2025-03-09 20:58:11,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-09 16:58:16] 2025-03-09 20:58:11,137 | INFO     | [monitor] control thread has ended
[2025-03-09 16:58:16] 2025-03-09 20:58:15,821 | INFO     | all workflow threads have been joined
[2025-03-09 16:58:16] 2025-03-09 20:58:15,822 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-09 16:58:16] 2025-03-09 20:58:15,822 | INFO     | traces error code: 0
[2025-03-09 16:58:16] 2025-03-09 20:58:15,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-09 16:58:16] 2025-03-09 20:58:16,092 [wrapper] ==== pilot stdout END ====
[2025-03-09 16:58:16] 2025-03-09 20:58:16,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-09 16:58:16] 2025-03-09 20:58:16,126 [wrapper] pilotpid: 779773
[2025-03-09 16:58:16] 2025-03-09 20:58:16,136 [wrapper] Pilot exit status: 0
[2025-03-09 16:58:16] 2025-03-09 20:58:16,151 [wrapper] pandaids: 6549584376
[2025-03-09 16:58:16] 2025-03-09 20:58:16,266 [wrapper] cleanup supervisor_pilot 2768470 779774
[2025-03-09 16:58:16] 2025-03-09 20:58:16,270 [wrapper] Test setup, not cleaning
[2025-03-09 16:58:16] 2025-03-09 20:58:16,275 [wrapper] apfmon messages muted
[2025-03-09 16:58:16] 2025-03-09 20:58:16,277 [wrapper] ==== wrapper stdout END ====
[2025-03-09 16:58:16] 2025-03-09 20:58:16,279 [wrapper] ==== wrapper stderr END ====
[2025-03-09 16:58:16]  *** Error codes and diagnostics ***
[2025-03-09 16:58:16]     "exeErrorCode": 0,
[2025-03-09 16:58:16]     "exeErrorDiag": "",
[2025-03-09 16:58:16]     "pilotErrorCode": 0,
[2025-03-09 16:58:16]     "pilotErrorDiag": "",
[2025-03-09 16:58:16]  *** Listing of results directory ***
[2025-03-09 16:58:16] total 428024
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas    491065 Mar  9 13:32 pilot3.tar.gz
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas      5118 Mar  9 13:35 queuedata.json
[2025-03-09 16:58:16] -rwx------. 1 boincer umatlas     35865 Mar  9 13:35 runpilot2-wrapper.sh
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas       100 Mar  9 13:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-09 16:58:16] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 13:37 run_atlas
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas       105 Mar  9 13:37 job.xml
[2025-03-09 16:58:16] -rw-r--r--. 2 boincer umatlas 248647415 Mar  9 13:37 EVNT.43558447._000018.pool.root.1
[2025-03-09 16:58:16] -rw-r--r--. 2 boincer umatlas     17569 Mar  9 13:37 start_atlas.sh
[2025-03-09 16:58:16] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 13:37 shared
[2025-03-09 16:58:16] -rw-r--r--. 2 boincer umatlas    503554 Mar  9 13:37 input.tar.gz
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas         0 Mar  9 13:37 boinc_lockfile
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas      2557 Mar  9 13:37 pandaJob.out
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas       467 Mar  9 13:37 setup.sh.local
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas    992355 Mar  9 13:37 agis_schedconf.cvmfs.json
[2025-03-09 16:58:16] drwx------. 4 boincer umatlas      4096 Mar  9 13:37 pilot3
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas      6859 Mar  9 16:54 init_data.xml
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas 182705166 Mar  9 16:57 HITS.43558449._000442.pool.root.1
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas       530 Mar  9 16:57 boinc_task_state.xml
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas      1043 Mar  9 16:57 memory_monitor_summary.json
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas        95 Mar  9 16:57 pilot_heartbeat.json
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 16:57 boinc_mmap_file
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas        28 Mar  9 16:57 wrapper_checkpoint.txt
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas   1579410 Mar  9 16:57 agis_ddmendpoints.agis.ALL.json
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas    378706 Mar  9 16:57 log.43558449._000442.job.log.tgz.1
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas      7739 Mar  9 16:58 heartbeat.json
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas      4610 Mar  9 16:58 pilotlog.txt
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas   1188935 Mar  9 16:58 log.43558449._000442.job.log.1
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas       357 Mar  9 16:58 output.list
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas       620 Mar  9 16:58 runtime_log
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas   1587200 Mar  9 16:58 result.tar.gz
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas     11429 Mar  9 16:58 runtime_log.err
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas       657 Mar  9 16:58 FEkMDmgjZB7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmiMjKDmUjU7mn.diag
[2025-03-09 16:58:16] -rw-r--r--. 1 boincer umatlas     21686 Mar  9 16:58 stderr.txt
[2025-03-09 16:58:16] HITS file was successfully produced:
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas 182705166 Mar  9 16:57 shared/HITS.pool.root.1
[2025-03-09 16:58:16]  *** Contents of shared directory: ***
[2025-03-09 16:58:16] total 423316
[2025-03-09 16:58:16] -rw-r--r--. 2 boincer umatlas 248647415 Mar  9 13:37 ATLAS.root_0
[2025-03-09 16:58:16] -rw-r--r--. 2 boincer umatlas     17569 Mar  9 13:37 start_atlas.sh
[2025-03-09 16:58:16] -rw-r--r--. 2 boincer umatlas    503554 Mar  9 13:37 input.tar.gz
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas 182705166 Mar  9 16:57 HITS.pool.root.1
[2025-03-09 16:58:16] -rw-------. 1 boincer umatlas   1587200 Mar  9 16:58 result.tar.gz
16:58:18 (762956): run_atlas exited; CPU time 58379.998259
16:58:18 (762956): called boinc_finish(0)

</stderr_txt>
]]>

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