Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:28:09 (3329753): wrapper (7.7.26015): starting
01:28:09 (3329753): wrapper: running run_atlas (--nthreads 8)
[2025-03-09 01:28:09] Arguments: --nthreads 8
[2025-03-09 01:28:09] Threads: 8
[2025-03-09 01:28:09] Checking for CVMFS
[2025-03-09 01:28:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-09 01:28:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-09 01:28:09] Running cvmfs_config stat atlas.cern.ch
[2025-03-09 01:28:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-09 01:28:09] 2.12.6.0 3794790 37222 349444 143476 1 119 18585669 37641216 32305 130560 0 881962 99.063 2446791 25702 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-03-09 01:28:09] CVMFS is ok
[2025-03-09 01:28:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-09 01:28:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-09 01:28:09] Further information can be found at the LHC@home message board.
[2025-03-09 01:28:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-09 01:28:09] Checking for apptainer binary...
[2025-03-09 01:28:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-09 01:28:09] Running /usr/bin/apptainer --version
[2025-03-09 01:28:09] apptainer version 1.3.6-1.el9
[2025-03-09 01:28:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-09 01:28:09] c6-2-11-1.aglt2.org
[2025-03-09 01:28:09] apptainer works
[2025-03-09 01:28:09] Set ATHENA_PROC_NUMBER=8
[2025-03-09 01:28:09] Set ATHENA_CORE_NUMBER=8
[2025-03-09 01:28:09] Starting ATLAS job with PandaID=6548833596
[2025-03-09 01:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-09 05:57:19]  *** The last 200 lines of the pilot log: ***
[2025-03-09 05:57:19] 2025-03-09 09:56:59,125 | INFO     | mean x: 1741508097.555
[2025-03-09 05:57:19] 2025-03-09 09:56:59,125 | INFO     | mean y: 2280195.325
[2025-03-09 05:57:19] 2025-03-09 09:56:59,125 | INFO     | -- intersect: -49148422291.88055
[2025-03-09 05:57:19] 2025-03-09 09:56:59,125 | INFO     | intersect: -49148422291.88055
[2025-03-09 05:57:19] 2025-03-09 09:56:59,125 | INFO     | chi2: 2.4647516701020353
[2025-03-09 05:57:19] 2025-03-09 09:56:59,125 | INFO     | current chi2=2.4647516701020353 (change=54.3767306962687 %)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,125 | INFO     | model: linear, x: [1741502333.0, 1741502394.0, 1741502455.0, 1741502516.0, 1741502577.0, 1741502638.0, 1741502699.0, 1741502760.0, 1741502821.0, 1741502882.0, 1741
[2025-03-09 05:57:19] 2025-03-09 09:56:59,126 | INFO     | sum of square deviations: 2299166260.3794947
[2025-03-09 05:57:19] 2025-03-09 09:56:59,126 | INFO     | sum of deviations: 31025050603.584583
[2025-03-09 05:57:19] 2025-03-09 09:56:59,126 | INFO     | mean x: 1741508250.0564103
[2025-03-09 05:57:19] 2025-03-09 09:56:59,126 | INFO     | mean y: 2312968.4923076923
[2025-03-09 05:57:19] 2025-03-09 09:56:59,126 | INFO     | -- intersect: -23497675925.58708
[2025-03-09 05:57:19] 2025-03-09 09:56:59,126 | INFO     | intersect: -23497675925.58708
[2025-03-09 05:57:19] 2025-03-09 09:56:59,127 | INFO     | chi2: 0.8725199819461169
[2025-03-09 05:57:19] 2025-03-09 09:56:59,127 | INFO     | current chi2=0.8725199819461169 (change=64.60008557738409 %)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,127 | INFO     | model: linear, x: [1741502638.0, 1741502699.0, 1741502760.0, 1741502821.0, 1741502882.0, 1741502943.0, 1741503004.0, 1741503065.0, 1741503126.0, 1741503187.0, 1741
[2025-03-09 05:57:19] 2025-03-09 09:56:59,127 | INFO     | sum of square deviations: 2126796882.8631508
[2025-03-09 05:57:19] 2025-03-09 09:56:59,127 | INFO     | sum of deviations: 5693517260.547373
[2025-03-09 05:57:19] 2025-03-09 09:56:59,127 | INFO     | mean x: 1741508402.5578947
[2025-03-09 05:57:19] 2025-03-09 09:56:59,127 | INFO     | mean y: 2335235.7684210525
[2025-03-09 05:57:19] 2025-03-09 09:56:59,127 | INFO     | -- intersect: -4659749907.032523
[2025-03-09 05:57:19] 2025-03-09 09:56:59,128 | INFO     | intersect: -4659749907.032523
[2025-03-09 05:57:19] 2025-03-09 09:56:59,128 | INFO     | chi2: 0.051910095731680185
[2025-03-09 05:57:19] 2025-03-09 09:56:59,128 | INFO     | current chi2=0.051910095731680185 (change=94.0505550811688 %)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,128 | INFO     | model: linear, x: [1741502943.0, 1741503004.0, 1741503065.0, 1741503126.0, 1741503187.0, 1741503248.0, 1741503309.0, 1741503370.0, 1741503431.0, 1741503492.0, 1741
[2025-03-09 05:57:19] 2025-03-09 09:56:59,128 | INFO     | sum of square deviations: 1963264880.3459463
[2025-03-09 05:57:19] 2025-03-09 09:56:59,128 | INFO     | sum of deviations: 1142788654.081081
[2025-03-09 05:57:19] 2025-03-09 09:56:59,129 | INFO     | mean x: 1741508555.0594594
[2025-03-09 05:57:19] 2025-03-09 09:56:59,129 | INFO     | mean y: 2339429.810810811
[2025-03-09 05:57:19] 2025-03-09 09:56:59,129 | INFO     | -- intersect: -1011368011.110966
[2025-03-09 05:57:19] 2025-03-09 09:56:59,129 | INFO     | intersect: -1011368011.110966
[2025-03-09 05:57:19] 2025-03-09 09:56:59,129 | INFO     | chi2: 0.012955739203935883
[2025-03-09 05:57:19] 2025-03-09 09:56:59,129 | INFO     | current chi2=0.012955739203935883 (change=75.04196626624764 %)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,129 | INFO     | model: linear, x: [1741503248.0, 1741503309.0, 1741503370.0, 1741503431.0, 1741503492.0, 1741503553.0, 1741503614.0, 1741503675.0, 1741503736.0, 1741503797.0, 1741
[2025-03-09 05:57:19] 2025-03-09 09:56:59,129 | INFO     | sum of square deviations: 1808337690.327779
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | sum of deviations: 1448071323.322223
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | mean x: 1741508707.5611112
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | mean y: 2339130.788888889
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | -- intersect: -1392217224.5996258
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | intersect: -1392217224.5996258
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | chi2: 0.012468645865808904
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | current chi2=0.012468645865808904 (change=3.759672300126283 %)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | left removable region: 50
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | model: linear, x: [1741504773.0, 1741504834.0, 1741504895.0, 1741504956.0, 1741505017.0, 1741505078.0, 1741505139.0, 1741505200.0, 1741505261.0, 1741505322.0, 1741
[2025-03-09 05:57:19] 2025-03-09 09:56:59,130 | INFO     | sum of square deviations: 1025668406.187922
[2025-03-09 05:57:19] 2025-03-09 09:56:59,131 | INFO     | sum of deviations: 736795430.9664434
[2025-03-09 05:57:19] 2025-03-09 09:56:59,131 | INFO     | mean x: 1741509287.0738256
[2025-03-09 05:57:19] 2025-03-09 09:56:59,131 | INFO     | mean y: 2339361.0939597315
[2025-03-09 05:57:19] 2025-03-09 09:56:59,131 | INFO     | -- intersect: -1248684925.079215
[2025-03-09 05:57:19] 2025-03-09 09:56:59,131 | INFO     | intersect: -1248684925.079215
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | chi2: 0.008586546034433477
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | -- intersect: -1248684925.079215
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | current memory leak: 0.72 B/s (using 149 data points, chi2=0.01)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | ..............................
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | . Timing measurements:
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | . get job = 0 s
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | . initial setup = 2 s
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | . payload setup = 5 s
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | . stage-in = 0 s
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | . payload execution = 12488 s
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | . stage-out = 2 s
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | . log creation = 0 s
[2025-03-09 05:57:19] 2025-03-09 09:56:59,132 | INFO     | ..............................
[2025-03-09 05:57:19] 2025-03-09 09:56:59,182 | INFO     | 
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | job summary report
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | --------------------------------------------------
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | PanDA job id: 6548833596
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | task id: 43558318
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | errors: (none)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | pilot state: finished 
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | transexitcode: 0
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | exeerrorcode: 0
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | exeerrordiag: 
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | exitcode: 0
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | exitmsg: OK
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | cpuconsumptiontime: 61360 s
[2025-03-09 05:57:19] 2025-03-09 09:56:59,183 | INFO     | nevents: 400
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | neventsw: 0
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | pid: 3348622
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | pgrp: 3348622
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | corecount: 8
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | event service: False
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | sizes: {0: 2378201, 1: 2378400, 5: 2378606, 11: 2378662, 12497: 2408692, 12500: 2417633, 12501: 2417817, 12505: 2417987}
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | --------------------------------------------------
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | 
[2025-03-09 05:57:19] 2025-03-09 09:56:59,184 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-03-09 05:57:19] 2025-03-09 09:56:59,201 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,201 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,201 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-09 05:57:19] 2025-03-09 09:56:59,202 | INFO     | job 6548833596 has completed (purged errors)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,203 | INFO     | overall cleanup function is called
[2025-03-09 05:57:19] 2025-03-09 09:56:59,398 | WARNING  | process 3348622 can no longer be monitored (due to stat problems) - aborting
[2025-03-09 05:57:19] 2025-03-09 09:56:59,714 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-03-09 05:57:19] 2025-03-09 09:56:59,910 | INFO     | number of running child processes to parent process 3348622: 1
[2025-03-09 05:57:19] 2025-03-09 09:56:59,911 | INFO     | maximum number of monitored processes: 6
[2025-03-09 05:57:19] 2025-03-09 09:56:59,911 | INFO     | aborting job monitoring since job object (job id=6548833596) has expired
[2025-03-09 05:57:19] 2025-03-09 09:57:00,210 | INFO     | --- collectZombieJob: --- 10, [3348622]
[2025-03-09 05:57:19] 2025-03-09 09:57:00,210 | INFO     | zombie collector waiting for pid 3348622
[2025-03-09 05:57:19] 2025-03-09 09:57:00,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-09 05:57:19] 2025-03-09 09:57:00,211 | INFO     | collected zombie processes
[2025-03-09 05:57:19] 2025-03-09 09:57:00,211 | INFO     | will attempt to kill all subprocesses of pid=3348622
[2025-03-09 05:57:19] 2025-03-09 09:57:00,500 | INFO     | process IDs to be killed: [3348622] (in reverse order)
[2025-03-09 05:57:19] 2025-03-09 09:57:00,653 | WARNING  | found no corresponding commands to process id(s)
[2025-03-09 05:57:19] 2025-03-09 09:57:00,653 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-09 05:57:19] 2025-03-09 09:57:00,673 | INFO     | did not find any defunct processes belonging to 3348622
[2025-03-09 05:57:19] 2025-03-09 09:57:00,693 | INFO     | did not find any defunct processes belonging to 3348622
[2025-03-09 05:57:19] 2025-03-09 09:57:00,693 | INFO     | ready for new job
[2025-03-09 05:57:19] 2025-03-09 09:57:00,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-09 05:57:19] 2025-03-09 09:57:00,696 | INFO     | **************************************
[2025-03-09 05:57:19] 2025-03-09 09:57:00,697 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-03-09 05:57:19] 2025-03-09 09:57:00,697 | INFO     | **************************************
[2025-03-09 05:57:19] 2025-03-09 09:57:00,697 | INFO     | 
[2025-03-09 05:57:19] 2025-03-09 09:57:00,714 | INFO     | architecture information:
[2025-03-09 05:57:19] 2025-03-09 09:57:00,715 | INFO     | executing command: cat /etc/os-release
[2025-03-09 05:57:19] 2025-03-09 09:57:00,730 | INFO     | cat /etc/os-release:
[2025-03-09 05:57:19] NAME="CentOS Linux"
[2025-03-09 05:57:19] VERSION="7 (Core)"
[2025-03-09 05:57:19] ID="centos"
[2025-03-09 05:57:19] ID_LIKE="rhel fedora"
[2025-03-09 05:57:19] VERSION_ID="7"
[2025-03-09 05:57:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-09 05:57:19] ANSI_COLOR="0;31"
[2025-03-09 05:57:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-09 05:57:19] HOME_URL="https://www.centos.org/"
[2025-03-09 05:57:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-09 05:57:19] 
[2025-03-09 05:57:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-09 05:57:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-09 05:57:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-09 05:57:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-09 05:57:19] 
[2025-03-09 05:57:19] 2025-03-09 09:57:00,730 | INFO     | **************************************
[2025-03-09 05:57:19] 2025-03-09 09:57:01,233 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-03-09 05:57:19] 2025-03-09 09:57:01,248 | INFO     | sufficient remaining disk space (96493109248 B)
[2025-03-09 05:57:19] 2025-03-09 09:57:01,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-09 05:57:19] 2025-03-09 09:57:01,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-09 05:57:19] 2025-03-09 09:57:01,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-09 05:57:19] 2025-03-09 09:57:01,250 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-03-09 05:57:19] 2025-03-09 09:57:01,250 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-09 05:57:19] 2025-03-09 09:57:01,250 | INFO     | aborting loop
[2025-03-09 05:57:19] 2025-03-09 09:57:01,251 | INFO     | found 0 job(s) in 20 queues
[2025-03-09 05:57:19] 2025-03-09 09:57:01,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-09 05:57:19] 2025-03-09 09:57:01,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-09 05:57:19] 2025-03-09 09:57:01,611 | INFO     | all data control threads have been joined
[2025-03-09 05:57:19] 2025-03-09 09:57:01,731 | INFO     | all payload control threads have been joined
[2025-03-09 05:57:19] 2025-03-09 09:57:01,838 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-09 05:57:19] 2025-03-09 09:57:01,843 | INFO     | all job control threads have been joined
[2025-03-09 05:57:19] 2025-03-09 09:57:02,255 | INFO     | [job] retrieve thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:02,255 | INFO     | [job] job monitor thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:02,446 | INFO     | [job] validate thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:02,447 | INFO     | [payload] execute_payloads thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:02,616 | INFO     | [data] control thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:02,736 | INFO     | [payload] control thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:02,848 | INFO     | [job] control thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:03,210 | INFO     | [data] copytool_in thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:03,267 | INFO     | [payload] failed_post thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:03,341 | INFO     | [payload] validate_pre thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:03,386 | INFO     | [payload] validate_post thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:03,714 | INFO     | [job] create_data_payload thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:03,844 | INFO     | [data] copytool_out thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:04,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-09 05:57:19] 2025-03-09 09:57:05,198 | INFO     | [job] queue monitor thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:05,257 | INFO     | [data] queue_monitor thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:12,183 | INFO     | job.realtimelogging is not enabled
[2025-03-09 05:57:19] 2025-03-09 09:57:13,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-09 05:57:19] 2025-03-09 09:57:14,464 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140346386769728)>', '<ExcThread(monitor, started 140345765521152)>']
[2025-03-09 05:57:19] 2025-03-09 09:57:15,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-09 05:57:19] 2025-03-09 09:57:15,314 | INFO     | [monitor] control thread has ended
[2025-03-09 05:57:19] 2025-03-09 09:57:19,479 | INFO     | all workflow threads have been joined
[2025-03-09 05:57:19] 2025-03-09 09:57:19,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-09 05:57:19] 2025-03-09 09:57:19,480 | INFO     | traces error code: 0
[2025-03-09 05:57:19] 2025-03-09 09:57:19,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-09 05:57:19] 2025-03-09 09:57:19,657 [wrapper] ==== pilot stdout END ====
[2025-03-09 05:57:19] 2025-03-09 09:57:19,659 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-09 05:57:19] 2025-03-09 09:57:19,662 [wrapper] pilotpid: 3333590
[2025-03-09 05:57:19] 2025-03-09 09:57:19,665 [wrapper] Pilot exit status: 0
[2025-03-09 05:57:19] 2025-03-09 09:57:19,673 [wrapper] pandaids: 6548833596
[2025-03-09 05:57:19] 2025-03-09 09:57:19,739 [wrapper] cleanup supervisor_pilot 1206689 3333591
[2025-03-09 05:57:19] 2025-03-09 09:57:19,742 [wrapper] Test setup, not cleaning
[2025-03-09 05:57:19] 2025-03-09 09:57:19,746 [wrapper] apfmon messages muted
[2025-03-09 05:57:19] 2025-03-09 09:57:19,749 [wrapper] ==== wrapper stdout END ====
[2025-03-09 05:57:19] 2025-03-09 09:57:19,751 [wrapper] ==== wrapper stderr END ====
[2025-03-09 05:57:19]  *** Error codes and diagnostics ***
[2025-03-09 05:57:19]     "exeErrorCode": 0,
[2025-03-09 05:57:19]     "exeErrorDiag": "",
[2025-03-09 05:57:19]     "pilotErrorCode": 0,
[2025-03-09 05:57:19]     "pilotErrorDiag": "",
[2025-03-09 05:57:19]  *** Listing of results directory ***
[2025-03-09 05:57:19] total 434452
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas    491065 Mar  9 01:22 pilot3.tar.gz
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas      5118 Mar  9 01:23 queuedata.json
[2025-03-09 05:57:19] -rwx------. 1 boincer umatlas     35865 Mar  9 01:26 runpilot2-wrapper.sh
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas       100 Mar  9 01:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-09 05:57:19] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  9 01:28 run_atlas
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas       105 Mar  9 01:28 job.xml
[2025-03-09 05:57:19] -rw-r--r--. 2 boincer umatlas 248421496 Mar  9 01:28 EVNT.43558315._000025.pool.root.1
[2025-03-09 05:57:19] -rw-r--r--. 2 boincer umatlas     17569 Mar  9 01:28 start_atlas.sh
[2025-03-09 05:57:19] drwxrwx--x. 2 boincer umatlas      4096 Mar  9 01:28 shared
[2025-03-09 05:57:19] -rw-r--r--. 2 boincer umatlas    503556 Mar  9 01:28 input.tar.gz
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas         0 Mar  9 01:28 boinc_lockfile
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas      2551 Mar  9 01:28 pandaJob.out
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas       467 Mar  9 01:28 setup.sh.local
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas    992045 Mar  9 01:28 agis_schedconf.cvmfs.json
[2025-03-09 05:57:19] drwx------. 4 boincer umatlas      4096 Mar  9 01:28 pilot3
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas      6856 Mar  9 05:55 init_data.xml
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas 189409487 Mar  9 05:56 HITS.43558318._000617.pool.root.1
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas       530 Mar  9 05:56 boinc_task_state.xml
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas        95 Mar  9 05:56 pilot_heartbeat.json
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas      1051 Mar  9 05:56 memory_monitor_summary.json
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas   1579410 Mar  9 05:56 agis_ddmendpoints.agis.ALL.json
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas    392879 Mar  9 05:56 log.43558318._000617.job.log.tgz.1
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas      7753 Mar  9 05:56 heartbeat.json
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas        28 Mar  9 05:57 wrapper_checkpoint.txt
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas      4410 Mar  9 05:57 pilotlog.txt
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas      8192 Mar  9 05:57 boinc_mmap_file
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas   1231335 Mar  9 05:57 log.43558318._000617.job.log.1
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas       357 Mar  9 05:57 output.list
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas       620 Mar  9 05:57 runtime_log
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas   1638400 Mar  9 05:57 result.tar.gz
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas     11424 Mar  9 05:57 runtime_log.err
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas       662 Mar  9 05:57 okXNDmjIPB7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYZ0KDmC2tVsn.diag
[2025-03-09 05:57:19] -rw-r--r--. 1 boincer umatlas     21685 Mar  9 05:57 stderr.txt
[2025-03-09 05:57:19] HITS file was successfully produced:
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas 189409487 Mar  9 05:56 shared/HITS.pool.root.1
[2025-03-09 05:57:19]  *** Contents of shared directory: ***
[2025-03-09 05:57:19] total 429692
[2025-03-09 05:57:19] -rw-r--r--. 2 boincer umatlas 248421496 Mar  9 01:28 ATLAS.root_0
[2025-03-09 05:57:19] -rw-r--r--. 2 boincer umatlas     17569 Mar  9 01:28 start_atlas.sh
[2025-03-09 05:57:19] -rw-r--r--. 2 boincer umatlas    503556 Mar  9 01:28 input.tar.gz
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas 189409487 Mar  9 05:56 HITS.pool.root.1
[2025-03-09 05:57:19] -rw-------. 1 boincer umatlas   1638400 Mar  9 05:57 result.tar.gz
05:57:20 (3329753): run_atlas exited; CPU time 61376.979092
05:57:20 (3329753): called boinc_finish(0)

</stderr_txt>
]]>

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