Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:46:55 (2547100): wrapper (7.7.26015): starting
10:46:55 (2547100): wrapper: running run_atlas (--nthreads 9)
[2025-03-08 10:46:55] Arguments: --nthreads 9
[2025-03-08 10:46:55] Threads: 9
[2025-03-08 10:46:55] Checking for CVMFS
[2025-03-08 10:46:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-03-08 10:46:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-03-08 10:46:56] Running cvmfs_config stat atlas.cern.ch
[2025-03-08 10:46:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-03-08 10:46:56] 2.12.6.0 2555540 152534 430804 143454 2 422 38094201 40960000 25486 130560 0 5257500 99.538 7049658 24193 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-03-08 10:46:56] CVMFS is ok
[2025-03-08 10:46:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-08 10:46:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-08 10:46:56] Further information can be found at the LHC@home message board.
[2025-03-08 10:46:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-08 10:46:56] Checking for apptainer binary...
[2025-03-08 10:46:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-03-08 10:46:56] Running /usr/bin/apptainer --version
[2025-03-08 10:46:56] apptainer version 1.3.6-1.el9
[2025-03-08 10:46:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-08 10:46:56] c6-8-12-3.aglt2.org
[2025-03-08 10:46:56] apptainer works
[2025-03-08 10:46:56] Set ATHENA_PROC_NUMBER=9
[2025-03-08 10:46:56] Set ATHENA_CORE_NUMBER=9
[2025-03-08 10:46:56] Starting ATLAS job with PandaID=6547205795
[2025-03-08 10:46:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-08 12:22:46]  *** The last 200 lines of the pilot log: ***
[2025-03-08 12:22:46]  filetype=log
[2025-03-08 12:22:46]  guid=bf007020-e736-479e-93cc-1c42c184417a
[2025-03-08 12:22:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-03-08 12:22:46]  is_altstaged=None
[2025-03-08 12:22:46]  is_tar=False
[2025-03-08 12:22:46]  lfn=log.43558192._000117.job.log.tgz.1
[2025-03-08 12:22:46]  mtime=0
[2025-03-08 12:22:46]  protocol_id=None
[2025-03-08 12:22:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-03-08 12:22:46]  replicas=None
[2025-03-08 12:22:46]  scope=mc23_13p6TeV
[2025-03-08 12:22:46]  status=None
[2025-03-08 12:22:46]  status_code=0
[2025-03-08 12:22:46]  storage_token=
[2025-03-08 12:22:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6547205795/log.43558192._000117.job.log.tgz.1
[2025-03-08 12:22:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/da/log.43558192._000117.job.log.tgz.1
[2025-03-08 12:22:46]  workdir=None
[2025-03-08 12:22:46] ]
[2025-03-08 12:22:46] 2025-03-08 17:22:29,124 | INFO     | transferring file log.43558192._000117.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6547205795/log.43558192._000117.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-03-08 12:22:46] 2025-03-08 17:22:29,124 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6547205795/log.43558192._000117.job.log.tgz.1 /tmp/boinchome/slots/0/log.43558192._000117.job
[2025-03-08 12:22:46] 2025-03-08 17:22:29,141 | INFO     | adding to output.list: log.43558192._000117.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/da/log.43558192._000117.job.log.tg
[2025-03-08 12:22:46] 2025-03-08 17:22:29,142 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-03-08 12:22:46] 2025-03-08 17:22:29,142 | INFO     | summary of transferred files:
[2025-03-08 12:22:46] 2025-03-08 17:22:29,142 | INFO     |  -- lfn=log.43558192._000117.job.log.tgz.1, status_code=0, status=transferred
[2025-03-08 12:22:46] 2025-03-08 17:22:29,142 | INFO     | stage-out finished correctly
[2025-03-08 12:22:46] 2025-03-08 17:22:29,220 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-03-08 12:22:46] 2025-03-08 17:22:30,228 | INFO     | job 6547205795 has state=finished
[2025-03-08 12:22:46] 2025-03-08 17:22:30,228 | INFO     | preparing for final server update for job 6547205795 in state='finished'
[2025-03-08 12:22:46] 2025-03-08 17:22:30,233 | INFO     | monitor loop #422: job 0:6547205795 is in state 'finished'
[2025-03-08 12:22:46] 2025-03-08 17:22:30,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-03-08 12:22:46] 2025-03-08 17:22:30,290 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-03-08 12:22:46] 2025-03-08 17:22:30,290 | INFO     | this job has now completed (state=finished)
[2025-03-08 12:22:46] 2025-03-08 17:22:30,290 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-03-08 12:22:46] 2025-03-08 17:22:30,291 | INFO     | log transfer has been attempted: DONE
[2025-03-08 12:22:46] 2025-03-08 17:22:30,291 | INFO     | job 6547205795 has finished - writing final server update
[2025-03-08 12:22:46] 2025-03-08 17:22:30,291 | INFO     | total number of processed events: 400 (read)
[2025-03-08 12:22:46] 2025-03-08 17:22:30,306 | INFO     | executing command: lscpu
[2025-03-08 12:22:46] 2025-03-08 17:22:30,362 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-03-08 12:22:46] 2025-03-08 17:22:30,392 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-03-08 12:22:46] 2025-03-08 17:22:32,736 | INFO     | monitor loop #423: job 0:6547205795 is in state 'finished'
[2025-03-08 12:22:46] 2025-03-08 17:22:32,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-03-08 12:22:46] 2025-03-08 17:22:34,156 | INFO     | CPU arch script returned: x86-64-v4
[2025-03-08 12:22:46] 2025-03-08 17:22:34,157 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6547205795/memory_monitor_summary.json (trf name=prmon)
[2025-03-08 12:22:46] 2025-03-08 17:22:34,158 | INFO     | extracted standard info from prmon json
[2025-03-08 12:22:46] 2025-03-08 17:22:34,158 | INFO     | extracted standard memory fields from prmon json
[2025-03-08 12:22:46] 2025-03-08 17:22:34,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-03-08 12:22:46] 2025-03-08 17:22:34,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-03-08 12:22:46] 2025-03-08 17:22:34,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-03-08 12:22:46] 2025-03-08 17:22:34,160 | INFO     | fitting pss+swap vs Time
[2025-03-08 12:22:46] 2025-03-08 17:22:34,161 | INFO     | model: linear, x: [1741449158.0, 1741449219.0, 1741449280.0, 1741449341.0, 1741449402.0, 1741449463.0, 1741449524.0, 1741449585.0, 1741449646.0, 1741449707.0, 1741
[2025-03-08 12:22:46] 2025-03-08 17:22:34,161 | INFO     | sum of square deviations: 204163828.0
[2025-03-08 12:22:46] 2025-03-08 17:22:34,161 | INFO     | sum of deviations: 14362555956.999998
[2025-03-08 12:22:46] 2025-03-08 17:22:34,161 | INFO     | mean x: 1741451781.0
[2025-03-08 12:22:46] 2025-03-08 17:22:34,161 | INFO     | mean y: 2206605.356321839
[2025-03-08 12:22:46] 2025-03-08 17:22:34,161 | INFO     | -- intersect: -122505775812.71336
[2025-03-08 12:22:46] 2025-03-08 17:22:34,161 | INFO     | intersect: -122505775812.71336
[2025-03-08 12:22:46] 2025-03-08 17:22:34,162 | INFO     | chi2: 1.917910743175498
[2025-03-08 12:22:46] 2025-03-08 17:22:34,162 | INFO     | -- intersect: -122505775812.71336
[2025-03-08 12:22:46] 2025-03-08 17:22:34,162 | INFO     | current memory leak: 70.35 B/s (using 87 data points, chi2=1.92)
[2025-03-08 12:22:46] 2025-03-08 17:22:34,162 | INFO     | ..............................
[2025-03-08 12:22:46] 2025-03-08 17:22:34,162 | INFO     | . Timing measurements:
[2025-03-08 12:22:46] 2025-03-08 17:22:34,162 | INFO     | . get job = 0 s
[2025-03-08 12:22:46] 2025-03-08 17:22:34,163 | INFO     | . initial setup = 2 s
[2025-03-08 12:22:46] 2025-03-08 17:22:34,163 | INFO     | . payload setup = 5 s
[2025-03-08 12:22:46] 2025-03-08 17:22:34,163 | INFO     | . stage-in = 0 s
[2025-03-08 12:22:46] 2025-03-08 17:22:34,163 | INFO     | . payload execution = 5697 s
[2025-03-08 12:22:46] 2025-03-08 17:22:34,163 | INFO     | . stage-out = 0 s
[2025-03-08 12:22:46] 2025-03-08 17:22:34,163 | INFO     | . log creation = 0 s
[2025-03-08 12:22:46] 2025-03-08 17:22:34,163 | INFO     | ..............................
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | 
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | job summary report
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | --------------------------------------------------
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | PanDA job id: 6547205795
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | task id: 43558192
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | errors: (none)
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | pilot state: finished 
[2025-03-08 12:22:46] 2025-03-08 17:22:34,248 | INFO     | transexitcode: 0
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | exeerrorcode: 0
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | exeerrordiag: 
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | exitcode: 0
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | exitmsg: OK
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | cpuconsumptiontime: 40356 s
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | nevents: 400
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | neventsw: 0
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | pid: 2558188
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | pgrp: 2558188
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | corecount: 9
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | event service: False
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | sizes: {0: 2378207, 1: 2378406, 5: 2378612, 11: 2378668, 5706: 2405239, 5707: 2414363, 5712: 2414477}
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | --------------------------------------------------
[2025-03-08 12:22:46] 2025-03-08 17:22:34,249 | INFO     | 
[2025-03-08 12:22:46] 2025-03-08 17:22:34,250 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-03-08 12:22:46] 2025-03-08 17:22:34,269 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,270 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,271 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-08 12:22:46] 2025-03-08 17:22:34,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,271 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-08 12:22:46] 2025-03-08 17:22:34,271 | INFO     | job 6547205795 has completed (purged errors)
[2025-03-08 12:22:46] 2025-03-08 17:22:34,271 | INFO     | overall cleanup function is called
[2025-03-08 12:22:46] 2025-03-08 17:22:35,279 | INFO     | --- collectZombieJob: --- 10, [2558188]
[2025-03-08 12:22:46] 2025-03-08 17:22:35,279 | INFO     | zombie collector waiting for pid 2558188
[2025-03-08 12:22:46] 2025-03-08 17:22:35,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-08 12:22:46] 2025-03-08 17:22:35,279 | INFO     | collected zombie processes
[2025-03-08 12:22:46] 2025-03-08 17:22:35,279 | INFO     | will attempt to kill all subprocesses of pid=2558188
[2025-03-08 12:22:46] 2025-03-08 17:22:35,460 | INFO     | process IDs to be killed: [2558188] (in reverse order)
[2025-03-08 12:22:46] 2025-03-08 17:22:35,551 | WARNING  | found no corresponding commands to process id(s)
[2025-03-08 12:22:46] 2025-03-08 17:22:35,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-08 12:22:46] 2025-03-08 17:22:35,565 | INFO     | did not find any defunct processes belonging to 2558188
[2025-03-08 12:22:46] 2025-03-08 17:22:35,578 | INFO     | did not find any defunct processes belonging to 2558188
[2025-03-08 12:22:46] 2025-03-08 17:22:35,579 | INFO     | ready for new job
[2025-03-08 12:22:46] 2025-03-08 17:22:35,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-08 12:22:46] 2025-03-08 17:22:35,580 | INFO     | **************************************
[2025-03-08 12:22:46] 2025-03-08 17:22:35,580 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-03-08 12:22:46] 2025-03-08 17:22:35,580 | INFO     | **************************************
[2025-03-08 12:22:46] 2025-03-08 17:22:35,580 | INFO     | 
[2025-03-08 12:22:46] 2025-03-08 17:22:35,595 | INFO     | architecture information:
[2025-03-08 12:22:46] 2025-03-08 17:22:35,595 | INFO     | executing command: cat /etc/os-release
[2025-03-08 12:22:46] 2025-03-08 17:22:35,613 | INFO     | cat /etc/os-release:
[2025-03-08 12:22:46] NAME="CentOS Linux"
[2025-03-08 12:22:46] VERSION="7 (Core)"
[2025-03-08 12:22:46] ID="centos"
[2025-03-08 12:22:46] ID_LIKE="rhel fedora"
[2025-03-08 12:22:46] VERSION_ID="7"
[2025-03-08 12:22:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-08 12:22:46] ANSI_COLOR="0;31"
[2025-03-08 12:22:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-08 12:22:46] HOME_URL="https://www.centos.org/"
[2025-03-08 12:22:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-08 12:22:46] 
[2025-03-08 12:22:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-08 12:22:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-08 12:22:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-08 12:22:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-08 12:22:46] 
[2025-03-08 12:22:46] 2025-03-08 17:22:35,613 | INFO     | **************************************
[2025-03-08 12:22:46] 2025-03-08 17:22:36,116 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-03-08 12:22:46] 2025-03-08 17:22:36,132 | INFO     | sufficient remaining disk space (56323211264 B)
[2025-03-08 12:22:46] 2025-03-08 17:22:36,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-08 12:22:46] 2025-03-08 17:22:36,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-08 12:22:46] 2025-03-08 17:22:36,133 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-03-08 12:22:46] 2025-03-08 17:22:36,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-08 12:22:46] 2025-03-08 17:22:36,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-08 12:22:46] 2025-03-08 17:22:36,133 | INFO     | found 0 job(s) in 20 queues
[2025-03-08 12:22:46] 2025-03-08 17:22:36,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-08 12:22:46] 2025-03-08 17:22:36,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-08 12:22:46] 2025-03-08 17:22:36,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-08 12:22:46] 2025-03-08 17:22:36,245 | INFO     | aborting loop
[2025-03-08 12:22:46] 2025-03-08 17:22:36,598 | INFO     | all job control threads have been joined
[2025-03-08 12:22:46] 2025-03-08 17:22:36,971 | INFO     | all payload control threads have been joined
[2025-03-08 12:22:46] 2025-03-08 17:22:36,995 | INFO     | all data control threads have been joined
[2025-03-08 12:22:46] 2025-03-08 17:22:37,138 | INFO     | [job] retrieve thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:37,139 | INFO     | [job] queue monitor thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:37,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-08 12:22:46] 2025-03-08 17:22:37,250 | INFO     | [job] job monitor thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:37,432 | INFO     | [job] validate thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:37,460 | INFO     | [payload] validate_post thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:37,466 | INFO     | [data] copytool_in thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:37,570 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:37,604 | INFO     | [job] control thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:37,974 | INFO     | [payload] control thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:38,001 | INFO     | [data] control thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:38,054 | INFO     | [job] create_data_payload thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:38,251 | INFO     | [payload] execute_payloads thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:38,511 | INFO     | [payload] failed_post thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:38,586 | INFO     | [payload] validate_pre thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:39,242 | INFO     | [data] copytool_out thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:40,140 | INFO     | [data] queue_monitor thread has finished
[2025-03-08 12:22:46] 2025-03-08 17:22:40,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140248729552704)>', '<ExcThread(monitor, started 140248256341760)>']
[2025-03-08 12:22:46] 2025-03-08 17:22:41,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-08 12:22:46] 2025-03-08 17:22:41,159 | INFO     | [monitor] control thread has ended
[2025-03-08 12:22:46] 2025-03-08 17:22:45,921 | INFO     | all workflow threads have been joined
[2025-03-08 12:22:46] 2025-03-08 17:22:45,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-08 12:22:46] 2025-03-08 17:22:45,922 | INFO     | traces error code: 0
[2025-03-08 12:22:46] 2025-03-08 17:22:45,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-08 12:22:46] 2025-03-08 17:22:46,086 [wrapper] ==== pilot stdout END ====
[2025-03-08 12:22:46] 2025-03-08 17:22:46,089 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-08 12:22:46] 2025-03-08 17:22:46,092 [wrapper] pilotpid: 2550776
[2025-03-08 12:22:46] 2025-03-08 17:22:46,094 [wrapper] Pilot exit status: 0
[2025-03-08 12:22:46] 2025-03-08 17:22:46,104 [wrapper] pandaids: 6547205795
[2025-03-08 12:22:46] 2025-03-08 17:22:46,181 [wrapper] cleanup supervisor_pilot 3136915 2550777
[2025-03-08 12:22:46] 2025-03-08 17:22:46,184 [wrapper] Test setup, not cleaning
[2025-03-08 12:22:46] 2025-03-08 17:22:46,189 [wrapper] apfmon messages muted
[2025-03-08 12:22:46] 2025-03-08 17:22:46,192 [wrapper] ==== wrapper stdout END ====
[2025-03-08 12:22:46] 2025-03-08 17:22:46,195 [wrapper] ==== wrapper stderr END ====
[2025-03-08 12:22:46]  *** Error codes and diagnostics ***
[2025-03-08 12:22:46]     "exeErrorCode": 0,
[2025-03-08 12:22:46]     "exeErrorDiag": "",
[2025-03-08 12:22:46]     "pilotErrorCode": 0,
[2025-03-08 12:22:46]     "pilotErrorDiag": "",
[2025-03-08 12:22:46]  *** Listing of results directory ***
[2025-03-08 12:22:46] total 434352
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas    491065 Mar  7 23:26 pilot3.tar.gz
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas      5118 Mar  7 23:28 queuedata.json
[2025-03-08 12:22:46] -rwx------. 1 boincer umatlas     35865 Mar  7 23:28 runpilot2-wrapper.sh
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas       100 Mar  8 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-08 12:22:46] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  8 10:46 run_atlas
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas       105 Mar  8 10:46 job.xml
[2025-03-08 12:22:46] -rw-r--r--. 2 boincer umatlas 271353085 Mar  8 10:46 EVNT.43558190._000005.pool.root.1
[2025-03-08 12:22:46] -rw-r--r--. 2 boincer umatlas    503550 Mar  8 10:46 input.tar.gz
[2025-03-08 12:22:46] -rw-r--r--. 2 boincer umatlas     17569 Mar  8 10:46 start_atlas.sh
[2025-03-08 12:22:46] drwxrwx--x. 2 boincer umatlas      4096 Mar  8 10:46 shared
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas         0 Mar  8 10:46 boinc_lockfile
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas      2552 Mar  8 10:46 pandaJob.out
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas       467 Mar  8 10:46 setup.sh.local
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas    992037 Mar  8 10:47 agis_schedconf.cvmfs.json
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas   1579410 Mar  8 10:47 agis_ddmendpoints.agis.ALL.json
[2025-03-08 12:22:46] drwx------. 4 boincer umatlas      4096 Mar  8 10:47 pilot3
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas      6839 Mar  8 12:09 init_data.xml
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas 167737228 Mar  8 12:21 HITS.43558192._000117.pool.root.1
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas       529 Mar  8 12:22 boinc_task_state.xml
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas        95 Mar  8 12:22 pilot_heartbeat.json
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas      1042 Mar  8 12:22 memory_monitor_summary.json
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas    383201 Mar  8 12:22 log.43558192._000117.job.log.tgz.1
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas      8192 Mar  8 12:22 boinc_mmap_file
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas        27 Mar  8 12:22 wrapper_checkpoint.txt
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas      7732 Mar  8 12:22 heartbeat.json
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas      4338 Mar  8 12:22 pilotlog.txt
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas    556865 Mar  8 12:22 log.43558192._000117.job.log.1
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas       357 Mar  8 12:22 output.list
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas       620 Mar  8 12:22 runtime_log
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas    962560 Mar  8 12:22 result.tar.gz
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas     11423 Mar  8 12:22 runtime_log.err
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas       654 Mar  8 12:22 OnoMDm9y0A7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmsuiKDmYyHPzn.diag
[2025-03-08 12:22:46] -rw-r--r--. 1 boincer umatlas     21382 Mar  8 12:22 stderr.txt
[2025-03-08 12:22:46] HITS file was successfully produced:
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas 167737228 Mar  8 12:21 shared/HITS.pool.root.1
[2025-03-08 12:22:46]  *** Contents of shared directory: ***
[2025-03-08 12:22:46] total 430260
[2025-03-08 12:22:46] -rw-r--r--. 2 boincer umatlas 271353085 Mar  8 10:46 ATLAS.root_0
[2025-03-08 12:22:46] -rw-r--r--. 2 boincer umatlas    503550 Mar  8 10:46 input.tar.gz
[2025-03-08 12:22:46] -rw-r--r--. 2 boincer umatlas     17569 Mar  8 10:46 start_atlas.sh
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas 167737228 Mar  8 12:21 HITS.pool.root.1
[2025-03-08 12:22:46] -rw-------. 1 boincer umatlas    962560 Mar  8 12:22 result.tar.gz
12:22:48 (2547100): run_atlas exited; CPU time 40271.584124
12:22:48 (2547100): called boinc_finish(0)

</stderr_txt>
]]>

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