Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-07 15:10:53 (25616): Detected: vboxwrapper 26206
2025-03-07 15:10:53 (25616): Detected: BOINC client v7.20.2
2025-03-07 15:10:54 (25616): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2025-03-07 15:10:54 (25616): Successfully copied 'init_data.xml' to the shared directory.
2025-03-07 15:10:55 (25616): Create VM. (boinc_1aa1f3793fa21217, slot#1)
2025-03-07 15:10:55 (25616): Setting Memory Size for VM. (4100MB)
2025-03-07 15:10:55 (25616): Setting CPU Count for VM. (1)
2025-03-07 15:10:56 (25616): Setting Chipset Options for VM.
2025-03-07 15:10:56 (25616): Setting Graphics Controller Options for VM.
2025-03-07 15:10:56 (25616): Setting Boot Options for VM.
2025-03-07 15:10:57 (25616): Setting Network Configuration for NAT.
2025-03-07 15:10:57 (25616): Enabling VM Network Access.
2025-03-07 15:10:57 (25616): Disabling USB Support for VM.
2025-03-07 15:10:57 (25616): Disabling COM Port Support for VM.
2025-03-07 15:10:58 (25616): Disabling LPT Port Support for VM.
2025-03-07 15:10:58 (25616): Disabling Audio Support for VM.
2025-03-07 15:10:58 (25616): Disabling Clipboard Support for VM.
2025-03-07 15:10:58 (25616): Disabling Drag and Drop Support for VM.
2025-03-07 15:10:59 (25616): Adding storage controller(s) to VM.
2025-03-07 15:10:59 (25616): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-07 15:11:00 (25616): Adding VirtualBox Guest Additions to VM.
2025-03-07 15:11:00 (25616): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-07 15:11:00 (25616): forwarding host port 62206 to guest port 80
2025-03-07 15:11:01 (25616): Enabling remote desktop for VM.
2025-03-07 15:11:01 (25616): Required extension pack not installed, remote desktop not enabled.
2025-03-07 15:11:01 (25616): Enabling shared directory for VM.
2025-03-07 15:11:01 (25616): Starting VM using VBoxManage interface. (boinc_1aa1f3793fa21217, slot#1)
2025-03-07 15:11:13 (25616): Successfully started VM. (PID = '11396')
2025-03-07 15:11:13 (25616): Reporting VM Process ID to BOINC.
2025-03-07 15:11:13 (25616): Guest Log: BIOS: VirtualBox 7.0.8
2025-03-07 15:11:13 (25616): Guest Log: CPUID EDX: 0x178bfbff
2025-03-07 15:11:13 (25616): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-07 15:11:13 (25616): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-07 15:11:13 (25616): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-07 15:11:13 (25616): Detected: Web Application Enabled (http://localhost:62206)
2025-03-07 15:11:13 (25616): Preference change detected
2025-03-07 15:11:13 (25616): Setting CPU throttle for VM. (100%)
2025-03-07 15:11:13 (25616): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-07 15:11:15 (25616): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-07 15:11:15 (25616): Guest Log: BIOS: Booting from Hard Disk...
2025-03-07 15:11:19 (25616): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-07 15:11:19 (25616): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-07 15:11:19 (25616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-07 15:11:28 (25616): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-07 15:11:28 (25616): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-07 15:11:49 (25616): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-07 15:11:49 (25616): Guest Log: 00:00:00.000320 main     Log opened 2025-03-07T15:11:47.470482000Z
2025-03-07 15:11:49 (25616): Guest Log: 00:00:00.000603 main     OS Product: Linux
2025-03-07 15:11:49 (25616): Guest Log: 00:00:00.000669 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-07 15:11:49 (25616): Guest Log: 00:00:00.000741 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-07 15:11:49 (25616): Guest Log: 00:00:00.000801 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-07 15:11:49 (25616): Guest Log: 00:00:00.000803 main     Process ID: 1255
2025-03-07 15:11:49 (25616): Guest Log: 00:00:00.000804 main     Package type: LINUX_64BITS_GENERIC
2025-03-07 15:11:49 (25616): Guest Log: 00:00:00.003172 main     5.2.32 r132073 started. Verbose level = 0
2025-03-07 15:11:49 (25616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-07 15:11:49 (25616): Guest Log: [INFO] Mounting shared directory
2025-03-07 15:11:50 (25616): Guest Log: [INFO] Checking for init_data.xml
2025-03-07 15:11:59 (25616): Guest Log: 00:00:10.046782 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 338 403 000ns (GuestNow=1 741 378 318 854 634 000 ns GuestLast=1 741 360 307 516 231 000 ns fSetTimeLastLoop=true )
2025-03-07 15:11:59 (25616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-07 15:11:59 (25616): Guest Log: [INFO] Detected branch: prod
2025-03-07 15:12:00 (25616): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-07 15:12:00 (25616): Guest Log: Copying input files
2025-03-07 15:12:04 (25616): Guest Log: Copied input files into RunAtlas.
2025-03-07 15:12:04 (25616): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-07 15:12:04 (25616): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-07 15:12:04 (25616): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-07 15:12:04 (25616): Guest Log: Further information can be found at the LHC@home message board.
2025-03-07 15:12:21 (25616): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-07 15:12:21 (25616): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-07 15:12:21 (25616): Guest Log: 2.6.3.0 1534 0 30084 143424 4 1 3117306 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-07 15:12:23 (25616): Guest Log: copied the webapp to /var/www
2025-03-07 15:12:23 (25616): Guest Log: core_number=1
2025-03-07 15:12:24 (25616): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-07 15:12:24 (25616): Guest Log:  *** Starting ATLAS job. (PandaID=6546630172 taskID=43558217) ***
2025-03-07 15:18:41 (25616): Guest Log:  *** Job finished ***
2025-03-07 15:18:41 (25616): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:26,606 | INFO     | [data] copytool_out thread has finished
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:30,109 | INFO     | [data] queue_monitor thread has finished
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:30,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639535531840)>', '<ExcThread(monitor, started 140638955755264)>']
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:31,240 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:31,241 | INFO     | [monitor] control thread has ended
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:35,255 | INFO     | all workflow threads have been joined
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:35,255 | INFO     | end of generic workflow (traces error code: 0)
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:35,256 | INFO     | traces error code: 0
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:35,256 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:35,416 [wrapper] ==== pilot stdout END ====
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:35,426 [wrapper] ==== wrapper stdout RESUME ====
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:35,434 [wrapper] pilotpid: 5829
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:35,440 [wrapper] Pilot exit status: 0
2025-03-07 15:18:41 (25616): Guest Log: ./runpilot2-wrapper.sh: line 1015: /usr/bin/xargs: Input/output error
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:40,829 [wrapper] pandaids: 
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:40,884 [wrapper] cleanup supervisor_pilot  5835 5830
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:40,894 [wrapper] Test setup, not cleaning
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:40,912 [wrapper] apfmon messages muted
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:40,921 [wrapper] ==== wrapper stdout END ====
2025-03-07 15:18:41 (25616): Guest Log: 2025-03-07 20:18:40,931 [wrapper] ==== wrapper stderr END ====
2025-03-07 15:18:41 (25616): Guest Log:  *** Error codes and diagnostics ***
2025-03-07 15:18:41 (25616): Guest Log:     "exeErrorCode": 0,
2025-03-07 15:18:41 (25616): Guest Log:     "exeErrorDiag": "",
2025-03-07 15:18:41 (25616): Guest Log:     "pilotErrorCode": 1305,
2025-03-07 15:18:41 (25616): Guest Log:     "pilotErrorDiag": "Failed to execute payload:[Errno 5] Input/output error: '/cvmfs/atlas.cern.ch/repo/sw/software/23.0/AthSimulation/23.0.31/InstallArea/x86_64-centos7-gcc11-opt/python/PyJobTransforms/trfArgClasses.py'",
2025-03-07 15:18:41 (25616): Guest Log:  *** Listing of results directory ***
2025-03-07 15:18:41 (25616): Guest Log: total 3796
2025-03-07 15:18:41 (25616): Guest Log: -rw-r--r--. 1 atlas atlas  491065 Mar  7 19:00 pilot3.tar.gz
2025-03-07 15:18:41 (25616): Guest Log: -rwx------. 1 atlas atlas   35865 Mar  7 19:14 runpilot2-wrapper.sh
2025-03-07 15:18:41 (25616): Guest Log: -rw-r--r--. 1 atlas atlas    5118 Mar  7 19:15 queuedata.json
2025-03-07 15:18:41 (25616): Guest Log: -rwxr-xr-x. 1 atlas atlas    8713 Mar  7 20:12 init_data.xml
2025-03-07 15:18:41 (25616): Guest Log: -rwxr-xr-x. 1 atlas atlas  503552 Mar  7 20:12 input.tar.gz
2025-03-07 15:18:41 (25616): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Mar  7 20:12 start_atlas.sh
2025-03-07 15:18:41 (25616): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar  7 20:12 EVNT.43558215._000003.pool.root.1 -> /data/./ATLAS.root_0
2025-03-07 15:18:41 (25616): Guest Log: -rw-r--r--. 1 atlas atlas    2550 Mar  7 20:12 pandaJob.out
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas     424 Mar  7 20:12 setup.sh.local
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas  992032 Mar  7 20:13 agis_schedconf.cvmfs.json
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas 1579410 Mar  7 20:14 agis_ddmendpoints.agis.ALL.json
2025-03-07 15:18:41 (25616): Guest Log: drwx------. 4 atlas atlas    4096 Mar  7 20:14 pilot3
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas      95 Mar  7 20:17 pilot_heartbeat.json
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas     988 Mar  7 20:18 memory_monitor_summary.json
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas    9199 Mar  7 20:18 log.43558217._000064.job.log.tgz.1
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas    2795 Mar  7 20:18 heartbeat.json
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas    4398 Mar  7 20:18 pilotlog.txt
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas   73572 Mar  7 20:18 log.43558217._000064.job.log.1
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas     188 Mar  7 20:18 output.list
2025-03-07 15:18:41 (25616): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar  7 20:18 runtime_log
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas   92160 Mar  7 20:18 result.tar.gz
2025-03-07 15:18:41 (25616): Guest Log: -rw-------. 1 atlas atlas     641 Mar  7 20:18 DCuKDmwKsA7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm7ZiKDmpMQPDn.diag
2025-03-07 15:18:41 (25616): Guest Log: -rw-r--r--. 1 atlas atlas   10664 Mar  7 20:18 runtime_log.err
2025-03-07 15:18:41 (25616): Guest Log: Looking for outputfile HITS.43558217._000064.pool.root.1
2025-03-07 15:18:41 (25616): Guest Log: No HITS file was produced
2025-03-07 15:18:41 (25616): Guest Log: Successfully finished the ATLAS job!
2025-03-07 15:18:42 (25616): Guest Log: Copying the results back to the shared directory!
2025-03-07 15:18:42 (25616): Guest Log:  *** Contents of shared directory: ***
2025-03-07 15:18:42 (25616): Guest Log: total 268272
2025-03-07 15:18:42 (25616): Guest Log: -rwxrwxrwx. 1 root root 274077245 Mar  7 20:10 ATLAS.root_0
2025-03-07 15:18:42 (25616): Guest Log: -rwxrwxrwx. 1 root root      8713 Mar  7 20:10 init_data.xml
2025-03-07 15:18:42 (25616): Guest Log: -rwxrwxrwx. 1 root root    503552 Mar  7 19:27 input.tar.gz
2025-03-07 15:18:42 (25616): Guest Log: -rwxrwxrwx. 1 root root     92160 Mar  7 20:18 result.tar.gz
2025-03-07 15:18:42 (25616): Guest Log: -rwxrwxrwx. 1 root root     17569 Mar  7 19:27 start_atlas.sh
2025-03-07 15:18:42 (25616): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-07 15:18:42 (25616): VM Completion File Detected.
2025-03-07 15:18:42 (25616): Powering off VM.
2025-03-07 15:18:43 (25616): Successfully stopped VM.
2025-03-07 15:18:43 (25616): Deregistering VM. (boinc_1aa1f3793fa21217, slot#1)
2025-03-07 15:18:43 (25616): Removing network bandwidth throttle group from VM.
2025-03-07 15:18:43 (25616): Removing VM from VirtualBox.
15:18:48 (25616): called boinc_finish(0)

</stderr_txt>
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