Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:48:59 (31582): wrapper (7.7.26015): starting
08:48:59 (31582): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 08:48:59] Arguments: --nthreads 12
[2025-02-26 08:48:59] Threads: 12
[2025-02-26 08:48:59] Checking for CVMFS
[2025-02-26 08:48:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 08:48:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 08:48:59] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 08:48:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 08:48:59] 2.11.2.0 10995 119503 138652 143076 1 1 15062289 20275201 1 130560 0 25104253 99.985 8085266 41236 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-26 08:48:59] CVMFS is ok
[2025-02-26 08:48:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 08:48:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 08:48:59] Further information can be found at the LHC@home message board.
[2025-02-26 08:48:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 08:48:59] Checking for apptainer binary...
[2025-02-26 08:48:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-26 08:48:59] Running /usr/bin/apptainer --version
[2025-02-26 08:48:59] apptainer version 1.3.2-1.el7
[2025-02-26 08:48:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 08:49:01] c-205-22.aglt2.org
[2025-02-26 08:49:01] apptainer works
[2025-02-26 08:49:01] Set ATHENA_PROC_NUMBER=12
[2025-02-26 08:49:01] Set ATHENA_CORE_NUMBER=12
[2025-02-26 08:49:01] Starting ATLAS job with PandaID=6532076154
[2025-02-26 08:49:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 10:14:17]  *** The last 200 lines of the pilot log: ***
[2025-02-26 10:14:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 10:14:17]  is_altstaged=None
[2025-02-26 10:14:17]  is_tar=False
[2025-02-26 10:14:17]  lfn=log.43401137._002301.job.log.tgz.1
[2025-02-26 10:14:17]  mtime=0
[2025-02-26 10:14:17]  protocol_id=None
[2025-02-26 10:14:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 10:14:17]  replicas=None
[2025-02-26 10:14:17]  scope=mc23_13p6TeV
[2025-02-26 10:14:17]  status=None
[2025-02-26 10:14:17]  status_code=0
[2025-02-26 10:14:17]  storage_token=
[2025-02-26 10:14:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6532076154/log.43401137._002301.job.log.tgz.1
[2025-02-26 10:14:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/6e/log.43401137._002301.job.log.tgz.1
[2025-02-26 10:14:17]  workdir=None
[2025-02-26 10:14:17] ]
[2025-02-26 10:14:17] 2025-02-26 15:13:49,757 | INFO     | transferring file log.43401137._002301.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6532076154/log.43401137._002301.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-26 10:14:17] 2025-02-26 15:13:49,758 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6532076154/log.43401137._002301.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401137._002301.job
[2025-02-26 10:14:17] 2025-02-26 15:13:49,780 | INFO     | adding to output.list: log.43401137._002301.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/6e/log.43401137._002301.job.log.tg
[2025-02-26 10:14:17] 2025-02-26 15:13:49,781 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 10:14:17] 2025-02-26 15:13:49,781 | INFO     | summary of transferred files:
[2025-02-26 10:14:17] 2025-02-26 15:13:49,781 | INFO     |  -- lfn=log.43401137._002301.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 10:14:17] 2025-02-26 15:13:49,781 | INFO     | stage-out finished correctly
[2025-02-26 10:14:17] 2025-02-26 15:13:50,016 | INFO     | monitor loop #375: job 0:6532076154 is in state 'finished'
[2025-02-26 10:14:17] 2025-02-26 15:13:50,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 10:14:17] 2025-02-26 15:13:50,375 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 10:14:17] 2025-02-26 15:13:50,853 | INFO     | job 6532076154 has state=finished
[2025-02-26 10:14:17] 2025-02-26 15:13:50,853 | INFO     | preparing for final server update for job 6532076154 in state='finished'
[2025-02-26 10:14:17] 2025-02-26 15:13:50,854 | INFO     | this job has now completed (state=finished)
[2025-02-26 10:14:17] 2025-02-26 15:13:50,854 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 10:14:17] 2025-02-26 15:13:50,854 | INFO     | log transfer has been attempted: DONE
[2025-02-26 10:14:17] 2025-02-26 15:13:50,854 | INFO     | job 6532076154 has finished - writing final server update
[2025-02-26 10:14:17] 2025-02-26 15:13:50,854 | INFO     | total number of processed events: 400 (read)
[2025-02-26 10:14:17] 2025-02-26 15:13:50,856 | INFO     | executing command: lscpu
[2025-02-26 10:14:17] 2025-02-26 15:13:50,881 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-26 10:14:17] 2025-02-26 15:13:50,895 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 10:14:17] 2025-02-26 15:13:52,519 | INFO     | monitor loop #376: job 0:6532076154 is in state 'finished'
[2025-02-26 10:14:17] 2025-02-26 15:13:52,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 10:14:17] 2025-02-26 15:13:54,897 | INFO     | PID=3029 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-02-26 10:14:17] 2025-02-26 15:13:55,040 | INFO     | monitor loop #377: job 0:6532076154 is in state 'finished'
[2025-02-26 10:14:17] 2025-02-26 15:13:55,040 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 10:14:17] 2025-02-26 15:13:56,603 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-26 10:14:17] 2025-02-26 15:13:56,603 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6532076154/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 10:14:17] 2025-02-26 15:13:56,604 | INFO     | extracted standard info from prmon json
[2025-02-26 10:14:17] 2025-02-26 15:13:56,605 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 10:14:17] 2025-02-26 15:13:56,605 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 10:14:17] 2025-02-26 15:13:56,605 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 10:14:17] 2025-02-26 15:13:56,605 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 10:14:17] 2025-02-26 15:13:56,607 | INFO     | fitting pss+swap vs Time
[2025-02-26 10:14:17] 2025-02-26 15:13:56,607 | INFO     | model: linear, x: [1740578090.0, 1740578151.0, 1740578212.0, 1740578273.0, 1740578334.0, 1740578395.0, 1740578456.0, 1740578517.0, 1740578578.0, 1740578639.0, 1740
[2025-02-26 10:14:17] 2025-02-26 15:13:56,607 | INFO     | sum of square deviations: 136095575.0
[2025-02-26 10:14:17] 2025-02-26 15:13:56,608 | INFO     | sum of deviations: 20613057078.5
[2025-02-26 10:14:17] 2025-02-26 15:13:56,608 | INFO     | mean x: 1740580377.5
[2025-02-26 10:14:17] 2025-02-26 15:13:56,608 | INFO     | mean y: 2589955.802631579
[2025-02-26 10:14:17] 2025-02-26 15:13:56,608 | INFO     | -- intersect: -263625986293.82617
[2025-02-26 10:14:17] 2025-02-26 15:13:56,608 | INFO     | intersect: -263625986293.82617
[2025-02-26 10:14:17] 2025-02-26 15:13:56,608 | INFO     | chi2: 2.1616993559669258
[2025-02-26 10:14:17] 2025-02-26 15:13:56,609 | INFO     | -- intersect: -263625986293.82617
[2025-02-26 10:14:17] 2025-02-26 15:13:56,609 | INFO     | current memory leak: 151.46 B/s (using 76 data points, chi2=2.16)
[2025-02-26 10:14:17] 2025-02-26 15:13:56,609 | INFO     | ..............................
[2025-02-26 10:14:17] 2025-02-26 15:13:56,609 | INFO     | . Timing measurements:
[2025-02-26 10:14:17] 2025-02-26 15:13:56,609 | INFO     | . get job = 0 s
[2025-02-26 10:14:17] 2025-02-26 15:13:56,609 | INFO     | . initial setup = 2 s
[2025-02-26 10:14:17] 2025-02-26 15:13:56,609 | INFO     | . payload setup = 7 s
[2025-02-26 10:14:17] 2025-02-26 15:13:56,610 | INFO     | . stage-in = 0 s
[2025-02-26 10:14:17] 2025-02-26 15:13:56,610 | INFO     | . payload execution = 5044 s
[2025-02-26 10:14:17] 2025-02-26 15:13:56,610 | INFO     | . stage-out = 0 s
[2025-02-26 10:14:17] 2025-02-26 15:13:56,610 | INFO     | . log creation = 0 s
[2025-02-26 10:14:17] 2025-02-26 15:13:56,610 | INFO     | ..............................
[2025-02-26 10:14:17] 2025-02-26 15:13:56,692 | INFO     | 
[2025-02-26 10:14:17] 2025-02-26 15:13:56,693 | INFO     | job summary report
[2025-02-26 10:14:17] 2025-02-26 15:13:56,693 | INFO     | --------------------------------------------------
[2025-02-26 10:14:17] 2025-02-26 15:13:56,693 | INFO     | PanDA job id: 6532076154
[2025-02-26 10:14:17] 2025-02-26 15:13:56,693 | INFO     | task id: 43401137
[2025-02-26 10:14:17] 2025-02-26 15:13:56,693 | INFO     | errors: (none)
[2025-02-26 10:14:17] 2025-02-26 15:13:56,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 10:14:17] 2025-02-26 15:13:56,694 | INFO     | pilot state: finished 
[2025-02-26 10:14:17] 2025-02-26 15:13:56,694 | INFO     | transexitcode: 0
[2025-02-26 10:14:17] 2025-02-26 15:13:56,694 | INFO     | exeerrorcode: 0
[2025-02-26 10:14:17] 2025-02-26 15:13:56,694 | INFO     | exeerrordiag: 
[2025-02-26 10:14:17] 2025-02-26 15:13:56,694 | INFO     | exitcode: 0
[2025-02-26 10:14:17] 2025-02-26 15:13:56,694 | INFO     | exitmsg: OK
[2025-02-26 10:14:17] 2025-02-26 15:13:56,694 | INFO     | cpuconsumptiontime: 47847 s
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | nevents: 400
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | neventsw: 0
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | pid: 9470
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | pgrp: 9470
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | corecount: 12
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | event service: False
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | sizes: {0: 2363555, 1: 2363754, 6: 2363960, 12: 2363988, 5056: 2390124, 5058: 2399065, 5059: 2399249, 5065: 2399419}
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | --------------------------------------------------
[2025-02-26 10:14:17] 2025-02-26 15:13:56,695 | INFO     | 
[2025-02-26 10:14:17] 2025-02-26 15:13:56,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-26 10:14:17] 2025-02-26 15:13:56,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,723 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 10:14:17] 2025-02-26 15:13:56,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,723 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 10:14:17] 2025-02-26 15:13:56,724 | INFO     | job 6532076154 has completed (purged errors)
[2025-02-26 10:14:17] 2025-02-26 15:13:56,724 | INFO     | overall cleanup function is called
[2025-02-26 10:14:17] 2025-02-26 15:13:57,732 | INFO     | --- collectZombieJob: --- 10, [9470]
[2025-02-26 10:14:17] 2025-02-26 15:13:57,732 | INFO     | zombie collector waiting for pid 9470
[2025-02-26 10:14:17] 2025-02-26 15:13:57,737 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 10:14:17] 2025-02-26 15:13:57,737 | INFO     | collected zombie processes
[2025-02-26 10:14:17] 2025-02-26 15:13:57,737 | INFO     | will attempt to kill all subprocesses of pid=9470
[2025-02-26 10:14:17] 2025-02-26 15:13:57,802 | INFO     | process IDs to be killed: [9470] (in reverse order)
[2025-02-26 10:14:17] 2025-02-26 15:13:57,851 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 10:14:17] 2025-02-26 15:13:57,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 10:14:17] 2025-02-26 15:13:57,856 | INFO     | did not find any defunct processes belonging to 9470
[2025-02-26 10:14:17] 2025-02-26 15:13:57,858 | INFO     | did not find any defunct processes belonging to 9470
[2025-02-26 10:14:17] 2025-02-26 15:13:57,858 | INFO     | ready for new job
[2025-02-26 10:14:17] 2025-02-26 15:13:57,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 10:14:17] 2025-02-26 15:13:57,859 | INFO     | **************************************
[2025-02-26 10:14:17] 2025-02-26 15:13:57,859 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 10:14:17] 2025-02-26 15:13:57,859 | INFO     | **************************************
[2025-02-26 10:14:17] 2025-02-26 15:13:57,860 | INFO     | 
[2025-02-26 10:14:17] 2025-02-26 15:13:57,860 | INFO     | architecture information:
[2025-02-26 10:14:17] 2025-02-26 15:13:57,861 | INFO     | executing command: cat /etc/os-release
[2025-02-26 10:14:17] 2025-02-26 15:13:57,875 | INFO     | cat /etc/os-release:
[2025-02-26 10:14:17] NAME="CentOS Linux"
[2025-02-26 10:14:17] VERSION="7 (Core)"
[2025-02-26 10:14:17] ID="centos"
[2025-02-26 10:14:17] ID_LIKE="rhel fedora"
[2025-02-26 10:14:17] VERSION_ID="7"
[2025-02-26 10:14:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 10:14:17] ANSI_COLOR="0;31"
[2025-02-26 10:14:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 10:14:17] HOME_URL="https://www.centos.org/"
[2025-02-26 10:14:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 10:14:17] 
[2025-02-26 10:14:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 10:14:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 10:14:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 10:14:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 10:14:17] 
[2025-02-26 10:14:17] 2025-02-26 15:13:57,875 | INFO     | **************************************
[2025-02-26 10:14:17] 2025-02-26 15:13:58,378 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-26 10:14:17] 2025-02-26 15:13:58,400 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-02-26 10:14:17] 2025-02-26 15:13:58,400 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 10:14:17] 2025-02-26 15:13:58,401 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 10:14:17] 2025-02-26 15:13:58,401 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 10:14:17] 2025-02-26 15:13:58,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 10:14:17] 2025-02-26 15:13:58,548 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 10:14:17] 2025-02-26 15:13:58,549 | INFO     | aborting loop
[2025-02-26 10:14:17] 2025-02-26 15:13:58,905 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 10:14:17] 2025-02-26 15:13:58,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 10:14:17] 2025-02-26 15:13:58,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 10:14:17] 2025-02-26 15:13:58,943 | INFO     | all job control threads have been joined
[2025-02-26 10:14:17] 2025-02-26 15:13:59,011 | INFO     | all payload control threads have been joined
[2025-02-26 10:14:17] 2025-02-26 15:13:59,405 | INFO     | [job] queue monitor thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:13:59,406 | INFO     | all data control threads have been joined
[2025-02-26 10:14:17] 2025-02-26 15:13:59,406 | INFO     | [job] retrieve thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:13:59,554 | INFO     | [job] job monitor thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:13:59,567 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:13:59,878 | INFO     | [payload] failed_post thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:13:59,949 | INFO     | [job] control thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:13:59,965 | INFO     | [job] validate thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:00,016 | INFO     | [payload] control thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:00,231 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:00,407 | INFO     | [data] copytool_out thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:00,407 | INFO     | [data] control thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:00,465 | INFO     | [payload] validate_post thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:00,490 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:00,770 | INFO     | [data] copytool_in thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:00,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 10:14:17] 2025-02-26 15:14:04,971 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:08,765 | INFO     | job.realtimelogging is not enabled
[2025-02-26 10:14:17] 2025-02-26 15:14:09,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 10:14:17] 2025-02-26 15:14:11,729 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140481426274112)>', '<ExcThread(monitor, started 140480813700864)>']
[2025-02-26 10:14:17] 2025-02-26 15:14:11,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 10:14:17] 2025-02-26 15:14:11,948 | INFO     | [monitor] control thread has ended
[2025-02-26 10:14:17] 2025-02-26 15:14:16,742 | INFO     | all workflow threads have been joined
[2025-02-26 10:14:17] 2025-02-26 15:14:16,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 10:14:17] 2025-02-26 15:14:16,748 | INFO     | traces error code: 0
[2025-02-26 10:14:17] 2025-02-26 15:14:16,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 10:14:17] 2025-02-26 15:14:16,838 [wrapper] ==== pilot stdout END ====
[2025-02-26 10:14:17] 2025-02-26 15:14:16,842 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 10:14:17] 2025-02-26 15:14:16,846 [wrapper] pilotpid: 3029
[2025-02-26 10:14:17] 2025-02-26 15:14:16,849 [wrapper] Pilot exit status: 0
[2025-02-26 10:14:17] 2025-02-26 15:14:16,864 [wrapper] pandaids: 6532076154
[2025-02-26 10:14:17] 2025-02-26 15:14:16,901 [wrapper] cleanup supervisor_pilot 27200 3030
[2025-02-26 10:14:17] 2025-02-26 15:14:16,905 [wrapper] Test setup, not cleaning
[2025-02-26 10:14:17] 2025-02-26 15:14:16,913 [wrapper] apfmon messages muted
[2025-02-26 10:14:17] 2025-02-26 15:14:16,917 [wrapper] ==== wrapper stdout END ====
[2025-02-26 10:14:17] 2025-02-26 15:14:16,921 [wrapper] ==== wrapper stderr END ====
[2025-02-26 10:14:17]  *** Error codes and diagnostics ***
[2025-02-26 10:14:17]     "exeErrorCode": 0,
[2025-02-26 10:14:17]     "exeErrorDiag": "",
[2025-02-26 10:14:17]     "pilotErrorCode": 0,
[2025-02-26 10:14:17]     "pilotErrorDiag": "",
[2025-02-26 10:14:17]  *** Listing of results directory ***
[2025-02-26 10:14:17] total 433384
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas      5118 Feb 26 08:46 queuedata.json
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas    491065 Feb 26 08:46 pilot3.tar.gz
[2025-02-26 10:14:17] -rwx------ 1 boincer umatlas     35865 Feb 26 08:48 runpilot2-wrapper.sh
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas       100 Feb 26 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 10:14:17] -rwxr-xr-x 1 boincer umatlas      7986 Feb 26 08:48 run_atlas
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas       105 Feb 26 08:48 job.xml
[2025-02-26 10:14:17] -rw-r--r-- 2 boincer umatlas 250261927 Feb 26 08:48 EVNT.43401135._000020.pool.root.1
[2025-02-26 10:14:17] -rw-r--r-- 2 boincer umatlas     17569 Feb 26 08:48 start_atlas.sh
[2025-02-26 10:14:17] drwxrwx--x 2 boincer umatlas      4096 Feb 26 08:48 shared
[2025-02-26 10:14:17] -rw-r--r-- 2 boincer umatlas    503558 Feb 26 08:48 input.tar.gz
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas         0 Feb 26 08:48 boinc_lockfile
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas      2554 Feb 26 08:49 pandaJob.out
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas       424 Feb 26 08:49 setup.sh.local
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas    990212 Feb 26 08:49 agis_schedconf.cvmfs.json
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas   1569202 Feb 26 08:49 agis_ddmendpoints.agis.ALL.json
[2025-02-26 10:14:17] drwx------ 4 boincer umatlas      4096 Feb 26 08:49 pilot3
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas      5868 Feb 26 10:09 init_data.xml
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas        95 Feb 26 10:13 pilot_heartbeat.json
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas 188044539 Feb 26 10:13 HITS.43401137._002301.pool.root.1
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas       529 Feb 26 10:13 boinc_task_state.xml
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas      1046 Feb 26 10:13 memory_monitor_summary.json
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas    371646 Feb 26 10:13 log.43401137._002301.job.log.tgz.1
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas      7763 Feb 26 10:13 heartbeat.json
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas      8192 Feb 26 10:14 boinc_mmap_file
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas        27 Feb 26 10:14 wrapper_checkpoint.txt
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas      4287 Feb 26 10:14 pilotlog.txt
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas    474518 Feb 26 10:14 log.43401137._002301.job.log.1
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas       357 Feb 26 10:14 output.list
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas       620 Feb 26 10:14 runtime_log
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas    860160 Feb 26 10:14 result.tar.gz
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas       658 Feb 26 10:14 Ve4MDmDxW76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIexKDmijvqdn.diag
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas     11015 Feb 26 10:14 runtime_log.err
[2025-02-26 10:14:17] -rw-r--r-- 1 boincer umatlas     21562 Feb 26 10:14 stderr.txt
[2025-02-26 10:14:17] HITS file was successfully produced:
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas 188044539 Feb 26 10:13 shared/HITS.pool.root.1
[2025-02-26 10:14:17]  *** Contents of shared directory: ***
[2025-02-26 10:14:17] total 429396
[2025-02-26 10:14:17] -rw-r--r-- 2 boincer umatlas 250261927 Feb 26 08:48 ATLAS.root_0
[2025-02-26 10:14:17] -rw-r--r-- 2 boincer umatlas     17569 Feb 26 08:48 start_atlas.sh
[2025-02-26 10:14:17] -rw-r--r-- 2 boincer umatlas    503558 Feb 26 08:48 input.tar.gz
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas 188044539 Feb 26 10:13 HITS.pool.root.1
[2025-02-26 10:14:17] -rw------- 1 boincer umatlas    860160 Feb 26 10:14 result.tar.gz
10:14:18 (31582): run_atlas exited; CPU time 47771.514515
10:14:18 (31582): called boinc_finish(0)

</stderr_txt>
]]>

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