Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
02:50:47 (365865): wrapper (7.7.26015): starting
02:50:47 (365865): wrapper: running run_atlas (--nthreads 4)
[2025-02-27 02:50:47] Arguments: --nthreads 4
[2025-02-27 02:50:47] Threads: 4
[2025-02-27 02:50:47] Checking for CVMFS
[2025-02-27 02:50:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-27 02:50:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-27 02:50:48] Running cvmfs_config stat atlas.cern.ch
[2025-02-27 02:50:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-27 02:50:48] 2.12.6.0 2596 15292 57940 143089 0 187 4614718 6144001 1830 130560 0 37809717 99.997 3285072 9085 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-02-27 02:50:48] CVMFS is ok
[2025-02-27 02:50:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-27 02:50:48] Checking for apptainer binary...
[2025-02-27 02:50:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-27 02:50:48] Running /usr/bin/apptainer --version
[2025-02-27 02:50:48] apptainer version 1.3.6
[2025-02-27 02:50:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-27 02:50:48] Ryzen8
[2025-02-27 02:50:48] apptainer works
[2025-02-27 02:50:48] Set ATHENA_PROC_NUMBER=4
[2025-02-27 02:50:48] Set ATHENA_CORE_NUMBER=4
[2025-02-27 02:50:48] Starting ATLAS job with PandaID=6531711871
[2025-02-27 02:50:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-27 04:13:43]  *** The last 200 lines of the pilot log: ***
[2025-02-27 04:13:43]  guid=f4f94d70-5e61-41aa-9eb3-559ca4100811
[2025-02-27 04:13:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-27 04:13:43]  is_altstaged=None
[2025-02-27 04:13:43]  is_tar=False
[2025-02-27 04:13:43]  lfn=log.43401171._002296.job.log.tgz.1
[2025-02-27 04:13:43]  mtime=0
[2025-02-27 04:13:43]  protocol_id=None
[2025-02-27 04:13:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-27 04:13:43]  replicas=None
[2025-02-27 04:13:43]  scope=mc23_13p6TeV
[2025-02-27 04:13:43]  status=None
[2025-02-27 04:13:43]  status_code=0
[2025-02-27 04:13:43]  storage_token=
[2025-02-27 04:13:43]  surl=/var/lib/boinc3/slots/0/PanDA_Pilot-6531711871/log.43401171._002296.job.log.tgz.1
[2025-02-27 04:13:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/41/log.43401171._002296.job.log.tgz.1
[2025-02-27 04:13:43]  workdir=None
[2025-02-27 04:13:43] ]
[2025-02-27 04:13:43] 2025-02-27 03:13:18,409 | INFO     | transferring file log.43401171._002296.job.log.tgz.1 from /var/lib/boinc3/slots/0/PanDA_Pilot-6531711871/log.43401171._002296.job.log.tgz.1 to /var/lib/boinc3/slot
[2025-02-27 04:13:43] 2025-02-27 03:13:18,409 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc3/slots/0/PanDA_Pilot-6531711871/log.43401171._002296.job.log.tgz.1 /var/lib/boinc3/slots/0/log.43401171._002296.j
[2025-02-27 04:13:43] 2025-02-27 03:13:18,421 | INFO     | adding to output.list: log.43401171._002296.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e3/41/log.43401171._002296.job.log.tg
[2025-02-27 04:13:43] 2025-02-27 03:13:18,422 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-27 04:13:43] 2025-02-27 03:13:18,422 | INFO     | summary of transferred files:
[2025-02-27 04:13:43] 2025-02-27 03:13:18,422 | INFO     |  -- lfn=log.43401171._002296.job.log.tgz.1, status_code=0, status=transferred
[2025-02-27 04:13:43] 2025-02-27 03:13:18,422 | INFO     | stage-out finished correctly
[2025-02-27 04:13:43] 2025-02-27 03:13:18,662 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-27 04:13:43] 2025-02-27 03:13:20,062 | INFO     | job 6531711871 has state=finished
[2025-02-27 04:13:43] 2025-02-27 03:13:20,062 | INFO     | preparing for final server update for job 6531711871 in state='finished'
[2025-02-27 04:13:43] 2025-02-27 03:13:20,062 | INFO     | this job has now completed (state=finished)
[2025-02-27 04:13:43] 2025-02-27 03:13:20,062 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-27 04:13:43] 2025-02-27 03:13:20,062 | INFO     | log transfer has been attempted: DONE
[2025-02-27 04:13:43] 2025-02-27 03:13:20,062 | INFO     | job 6531711871 has finished - writing final server update
[2025-02-27 04:13:43] 2025-02-27 03:13:20,062 | INFO     | total number of processed events: 400 (read)
[2025-02-27 04:13:43] 2025-02-27 03:13:20,064 | INFO     | executing command: lscpu
[2025-02-27 04:13:43] 2025-02-27 03:13:20,082 | INFO     | found 6 cores (6 cores per socket, 1 sockets)
[2025-02-27 04:13:43] 2025-02-27 03:13:20,091 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-27 04:13:43] 2025-02-27 03:13:24,319 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-27 04:13:43] 2025-02-27 03:13:24,320 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6531711871/memory_monitor_summary.json (trf name=prmon)
[2025-02-27 04:13:43] 2025-02-27 03:13:24,320 | INFO     | extracted standard info from prmon json
[2025-02-27 04:13:43] 2025-02-27 03:13:24,320 | INFO     | extracted standard memory fields from prmon json
[2025-02-27 04:13:43] 2025-02-27 03:13:24,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-27 04:13:43] 2025-02-27 03:13:24,320 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-27 04:13:43] 2025-02-27 03:13:24,320 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-27 04:13:43] 2025-02-27 03:13:24,321 | INFO     | fitting pss+swap vs Time
[2025-02-27 04:13:43] 2025-02-27 03:13:24,321 | INFO     | model: linear, x: [1740621375.0, 1740621436.0, 1740621497.0, 1740621558.0, 1740621619.0, 1740621680.0, 1740621741.0, 1740621802.0, 1740621863.0, 1740621924.0, 1740
[2025-02-27 04:13:43] 2025-02-27 03:13:24,321 | INFO     | sum of square deviations: 125630262.5
[2025-02-27 04:13:43] 2025-02-27 03:13:24,322 | INFO     | sum of deviations: -4677989868.500001
[2025-02-27 04:13:43] 2025-02-27 03:13:24,322 | INFO     | mean x: 1740623601.5
[2025-02-27 04:13:43] 2025-02-27 03:13:24,322 | INFO     | mean y: 2467542.0135135134
[2025-02-27 04:13:43] 2025-02-27 03:13:24,322 | INFO     | -- intersect: 64816624661.91114
[2025-02-27 04:13:43] 2025-02-27 03:13:24,322 | INFO     | intersect: 64816624661.91114
[2025-02-27 04:13:43] 2025-02-27 03:13:24,322 | INFO     | chi2: 0.0921405429832217
[2025-02-27 04:13:43] 2025-02-27 03:13:24,322 | INFO     | -- intersect: 64816624661.91114
[2025-02-27 04:13:43] 2025-02-27 03:13:24,322 | INFO     | current memory leak: -37.24 B/s (using 74 data points, chi2=0.09)
[2025-02-27 04:13:43] 2025-02-27 03:13:24,325 | INFO     | ..............................
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | . Timing measurements:
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | . get job = 0 s
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | . initial setup = 1 s
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | . payload setup = 2 s
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | . stage-in = 0 s
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | . payload execution = 4927 s
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | . stage-out = 0 s
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | . log creation = 0 s
[2025-02-27 04:13:43] 2025-02-27 03:13:24,326 | INFO     | ..............................
[2025-02-27 04:13:43] 2025-02-27 03:13:24,368 | INFO     | 
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | job summary report
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | --------------------------------------------------
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | PanDA job id: 6531711871
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | task id: 43401171
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | errors: (none)
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | pilot state: finished 
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | transexitcode: 0
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | exeerrorcode: 0
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | exeerrordiag: 
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | exitcode: 0
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | exitmsg: OK
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | cpuconsumptiontime: 18325 s
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | nevents: 400
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | neventsw: 0
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | pid: 375940
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | pgrp: 375940
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | corecount: 4
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | event service: False
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | sizes: {0: 2363816, 2: 2364022, 11: 2364050, 4933: 2399269, 4934: 2399269, 4939: 2399439}
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | --------------------------------------------------
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | 
[2025-02-27 04:13:43] 2025-02-27 03:13:24,369 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/0
[2025-02-27 04:13:43] 2025-02-27 03:13:24,383 | WARNING  | process 375940 can no longer be monitored (due to stat problems) - aborting
[2025-02-27 04:13:43] 2025-02-27 03:13:24,384 | INFO     | using path: /var/lib/boinc3/slots/0/PanDA_Pilot-6531711871/memory_monitor_summary.json (trf name=prmon)
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-27 04:13:43] 2025-02-27 03:13:24,388 | INFO     | job 6531711871 has completed (purged errors)
[2025-02-27 04:13:43] 2025-02-27 03:13:24,388 | INFO     | overall cleanup function is called
[2025-02-27 04:13:43] 2025-02-27 03:13:24,432 | INFO     | number of running child processes to parent process 375940: 1
[2025-02-27 04:13:43] 2025-02-27 03:13:24,432 | INFO     | maximum number of monitored processes: 6
[2025-02-27 04:13:43] 2025-02-27 03:13:24,432 | INFO     | aborting job monitoring since job object (job id=6531711871) has expired
[2025-02-27 04:13:43] 2025-02-27 03:13:25,394 | INFO     | --- collectZombieJob: --- 10, [375940]
[2025-02-27 04:13:43] 2025-02-27 03:13:25,394 | INFO     | zombie collector waiting for pid 375940
[2025-02-27 04:13:43] 2025-02-27 03:13:25,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-27 04:13:43] 2025-02-27 03:13:25,394 | INFO     | collected zombie processes
[2025-02-27 04:13:43] 2025-02-27 03:13:25,394 | INFO     | will attempt to kill all subprocesses of pid=375940
[2025-02-27 04:13:43] 2025-02-27 03:13:25,455 | INFO     | process IDs to be killed: [375940] (in reverse order)
[2025-02-27 04:13:43] 2025-02-27 03:13:25,497 | WARNING  | found no corresponding commands to process id(s)
[2025-02-27 04:13:43] 2025-02-27 03:13:25,497 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-27 04:13:43] 2025-02-27 03:13:25,499 | INFO     | did not find any defunct processes belonging to 375940
[2025-02-27 04:13:43] 2025-02-27 03:13:25,501 | INFO     | did not find any defunct processes belonging to 375940
[2025-02-27 04:13:43] 2025-02-27 03:13:25,501 | INFO     | ready for new job
[2025-02-27 04:13:43] 2025-02-27 03:13:25,501 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-27 04:13:43] 2025-02-27 03:13:25,502 | INFO     | **************************************
[2025-02-27 04:13:43] 2025-02-27 03:13:25,502 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-27 04:13:43] 2025-02-27 03:13:25,502 | INFO     | **************************************
[2025-02-27 04:13:43] 2025-02-27 03:13:25,502 | INFO     | 
[2025-02-27 04:13:43] 2025-02-27 03:13:25,502 | INFO     | architecture information:
[2025-02-27 04:13:43] 2025-02-27 03:13:25,503 | INFO     | executing command: cat /etc/os-release
[2025-02-27 04:13:43] 2025-02-27 03:13:25,519 | INFO     | cat /etc/os-release:
[2025-02-27 04:13:43] NAME="CentOS Linux"
[2025-02-27 04:13:43] VERSION="7 (Core)"
[2025-02-27 04:13:43] ID="centos"
[2025-02-27 04:13:43] ID_LIKE="rhel fedora"
[2025-02-27 04:13:43] VERSION_ID="7"
[2025-02-27 04:13:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-27 04:13:43] ANSI_COLOR="0;31"
[2025-02-27 04:13:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-27 04:13:43] HOME_URL="https://www.centos.org/"
[2025-02-27 04:13:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-27 04:13:43] 
[2025-02-27 04:13:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-27 04:13:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-27 04:13:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-27 04:13:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-27 04:13:43] 
[2025-02-27 04:13:43] 2025-02-27 03:13:25,520 | INFO     | **************************************
[2025-02-27 04:13:43] 2025-02-27 03:13:25,535 | INFO     | 4954s have passed since pilot start
[2025-02-27 04:13:43] 2025-02-27 03:13:26,022 | INFO     | executing command: df -mP /var/lib/boinc3/slots/0
[2025-02-27 04:13:43] 2025-02-27 03:13:26,031 | INFO     | sufficient remaining disk space (103078166528 B)
[2025-02-27 04:13:43] 2025-02-27 03:13:26,031 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-27 04:13:43] 2025-02-27 03:13:26,031 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-27 04:13:43] 2025-02-27 03:13:26,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-27 04:13:43] 2025-02-27 03:13:26,032 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-27 04:13:43] 2025-02-27 03:13:26,032 | INFO     | aborting loop
[2025-02-27 04:13:43] 2025-02-27 03:13:26,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-27 04:13:43] 2025-02-27 03:13:26,531 | INFO     | all data control threads have been joined
[2025-02-27 04:13:43] 2025-02-27 03:13:26,540 | INFO     | found 0 job(s) in 20 queues
[2025-02-27 04:13:43] 2025-02-27 03:13:26,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-27 04:13:43] 2025-02-27 03:13:26,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-27 04:13:43] 2025-02-27 03:13:27,037 | INFO     | [job] queue monitor thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:27,037 | INFO     | [job] job monitor thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:27,039 | INFO     | [job] retrieve thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:27,230 | INFO     | all payload control threads have been joined
[2025-02-27 04:13:43] 2025-02-27 03:13:27,287 | INFO     | [payload] failed_post thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:27,438 | INFO     | all job control threads have been joined
[2025-02-27 04:13:43] 2025-02-27 03:13:27,536 | INFO     | [data] control thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:27,636 | INFO     | [job] validate thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:27,769 | INFO     | [payload] validate_pre thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:27,777 | INFO     | [job] create_data_payload thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:27,856 | INFO     | [payload] execute_payloads thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:28,154 | INFO     | [data] copytool_in thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:28,235 | INFO     | [payload] control thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:28,443 | INFO     | [job] control thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:28,474 | INFO     | [data] copytool_out thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:28,488 | INFO     | [payload] validate_post thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:29,195 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-27 04:13:43] 2025-02-27 03:13:33,201 | INFO     | [data] queue_monitor thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:36,296 | INFO     | job.realtimelogging is not enabled
[2025-02-27 04:13:43] 2025-02-27 03:13:37,301 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-27 04:13:43] 2025-02-27 03:13:38,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138171070080832)>', '<ExcThread(monitor, started 138170792380160)>']
[2025-02-27 04:13:43] 2025-02-27 03:13:38,600 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-27 04:13:43] 2025-02-27 03:13:38,601 | INFO     | [monitor] control thread has ended
[2025-02-27 04:13:43] 2025-02-27 03:13:43,131 | INFO     | all workflow threads have been joined
[2025-02-27 04:13:43] 2025-02-27 03:13:43,131 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-27 04:13:43] 2025-02-27 03:13:43,131 | INFO     | traces error code: 0
[2025-02-27 04:13:43] 2025-02-27 03:13:43,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-27 04:13:43] 2025-02-27 03:13:43,186 [wrapper] ==== pilot stdout END ====
[2025-02-27 04:13:43] 2025-02-27 03:13:43,196 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-27 04:13:43] 2025-02-27 03:13:43,203 [wrapper] pilotpid: 369507
[2025-02-27 04:13:43] 2025-02-27 03:13:43,208 [wrapper] Pilot exit status: 0
[2025-02-27 04:13:43] 2025-02-27 03:13:43,216 [wrapper] pandaids: 6531711871
[2025-02-27 04:13:43] 2025-02-27 03:13:43,239 [wrapper] cleanup supervisor_pilot  429087 369508
[2025-02-27 04:13:43] 2025-02-27 03:13:43,246 [wrapper] Test setup, not cleaning
[2025-02-27 04:13:43] 2025-02-27 03:13:43,251 [wrapper] apfmon messages muted
[2025-02-27 04:13:43] 2025-02-27 03:13:43,252 [wrapper] ==== wrapper stdout END ====
[2025-02-27 04:13:43] 2025-02-27 03:13:43,253 [wrapper] ==== wrapper stderr END ====
[2025-02-27 04:13:43]  *** Error codes and diagnostics ***
[2025-02-27 04:13:43]     "exeErrorCode": 0,
[2025-02-27 04:13:43]     "exeErrorDiag": "",
[2025-02-27 04:13:43]     "pilotErrorCode": 0,
[2025-02-27 04:13:43]     "pilotErrorDiag": "",
[2025-02-27 04:13:43]  *** Listing of results directory ***
[2025-02-27 04:13:43] insgesamt 423444
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc    491065 26. Feb 08:59 pilot3.tar.gz
[2025-02-27 04:13:43] -rwx------ 1 boinc boinc     35865 26. Feb 09:08 runpilot2-wrapper.sh
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc      5118 26. Feb 09:08 queuedata.json
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc       100 27. Feb 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-27 04:13:43] -rwxr-xr-x 1 boinc boinc      7986 27. Feb 02:50 run_atlas
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc       105 27. Feb 02:50 job.xml
[2025-02-27 04:13:43] -rw-r--r-- 2 boinc boinc     17569 27. Feb 02:50 start_atlas.sh
[2025-02-27 04:13:43] drwxrwx--x 2 boinc boinc      4096 27. Feb 02:50 shared
[2025-02-27 04:13:43] -rw-r--r-- 2 boinc boinc    503553 27. Feb 02:50 input.tar.gz
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc      9627 27. Feb 02:50 init_data.xml
[2025-02-27 04:13:43] -rw-r--r-- 2 boinc boinc 248300698 27. Feb 02:50 EVNT.43401169._000061.pool.root.1
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc         0 27. Feb 02:50 boinc_lockfile
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc      2541 27. Feb 02:50 pandaJob.out
[2025-02-27 04:13:43] -rw------- 1 boinc boinc       461 27. Feb 02:50 setup.sh.local
[2025-02-27 04:13:43] -rw------- 1 boinc boinc    989837 27. Feb 02:50 agis_schedconf.cvmfs.json
[2025-02-27 04:13:43] -rw------- 1 boinc boinc   1569202 27. Feb 02:50 agis_ddmendpoints.agis.ALL.json
[2025-02-27 04:13:43] drwx------ 4 boinc boinc      4096 27. Feb 02:50 pilot3
[2025-02-27 04:13:43] -rw------- 1 boinc boinc 180051241 27. Feb 04:12 HITS.43401171._002296.pool.root.1
[2025-02-27 04:13:43] -rw------- 1 boinc boinc      1025 27. Feb 04:13 memory_monitor_summary.json
[2025-02-27 04:13:43] -rw------- 1 boinc boinc    233468 27. Feb 04:13 log.43401171._002296.job.log.tgz.1
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc      8192 27. Feb 04:13 boinc_mmap_file
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc        27 27. Feb 04:13 wrapper_checkpoint.txt
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc       529 27. Feb 04:13 boinc_task_state.xml
[2025-02-27 04:13:43] -rw------- 1 boinc boinc      7677 27. Feb 04:13 heartbeat.json
[2025-02-27 04:13:43] -rw------- 1 boinc boinc        95 27. Feb 04:13 pilot_heartbeat.json
[2025-02-27 04:13:43] -rw------- 1 boinc boinc      4362 27. Feb 04:13 pilotlog.txt
[2025-02-27 04:13:43] -rw------- 1 boinc boinc    491961 27. Feb 04:13 log.43401171._002296.job.log.1
[2025-02-27 04:13:43] -rw------- 1 boinc boinc       357 27. Feb 04:13 output.list
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc       620 27. Feb 04:13 runtime_log
[2025-02-27 04:13:43] -rw------- 1 boinc boinc    747520 27. Feb 04:13 result.tar.gz
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc     11363 27. Feb 04:13 runtime_log.err
[2025-02-27 04:13:43] -rw------- 1 boinc boinc       642 27. Feb 04:13 mSzKDmAeR76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5cxKDmXX6iDm.diag
[2025-02-27 04:13:43] -rw-r--r-- 1 boinc boinc     21054 27. Feb 04:13 stderr.txt
[2025-02-27 04:13:43] HITS file was successfully produced:
[2025-02-27 04:13:43] -rw------- 1 boinc boinc 180051241 27. Feb 04:12 shared/HITS.pool.root.1
[2025-02-27 04:13:43]  *** Contents of shared directory: ***
[2025-02-27 04:13:43] insgesamt 419568
[2025-02-27 04:13:43] -rw-r--r-- 2 boinc boinc     17569 27. Feb 02:50 start_atlas.sh
[2025-02-27 04:13:43] -rw-r--r-- 2 boinc boinc    503553 27. Feb 02:50 input.tar.gz
[2025-02-27 04:13:43] -rw-r--r-- 2 boinc boinc 248300698 27. Feb 02:50 ATLAS.root_0
[2025-02-27 04:13:43] -rw------- 1 boinc boinc 180051241 27. Feb 04:12 HITS.pool.root.1
[2025-02-27 04:13:43] -rw------- 1 boinc boinc    747520 27. Feb 04:13 result.tar.gz
04:13:44 (365865): run_atlas exited; CPU time 18319.954973
04:13:44 (365865): called boinc_finish(0)

</stderr_txt>
]]>

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