Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:39:19 (27700): wrapper (7.7.26015): starting
00:39:19 (27700): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 00:39:19] Arguments: --nthreads 12
[2025-02-26 00:39:19] Threads: 12
[2025-02-26 00:39:19] Checking for CVMFS
[2025-02-26 00:39:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 00:39:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 00:39:19] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 00:39:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 00:39:19] 2.11.2.0 3124 7834 124304 143064 3 1 9093528 20275200 1 130560 0 5986994 99.822 2620612 28393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-26 00:39:19] CVMFS is ok
[2025-02-26 00:39:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 00:39:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 00:39:19] Further information can be found at the LHC@home message board.
[2025-02-26 00:39:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 00:39:19] Checking for apptainer binary...
[2025-02-26 00:39:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-26 00:39:19] Running /usr/bin/apptainer --version
[2025-02-26 00:39:19] apptainer version 1.3.2-1.el7
[2025-02-26 00:39:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 00:39:21] c-205-29.aglt2.org
[2025-02-26 00:39:21] apptainer works
[2025-02-26 00:39:21] Set ATHENA_PROC_NUMBER=12
[2025-02-26 00:39:21] Set ATHENA_CORE_NUMBER=12
[2025-02-26 00:39:21] Starting ATLAS job with PandaID=6531533520
[2025-02-26 00:39:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 01:59:38]  *** The last 200 lines of the pilot log: ***
[2025-02-26 01:59:38]  status=None
[2025-02-26 01:59:38]  status_code=0
[2025-02-26 01:59:38]  storage_token=
[2025-02-26 01:59:38]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6531533520/log.43401171._002288.job.log.tgz.1
[2025-02-26 01:59:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/02/log.43401171._002288.job.log.tgz.1
[2025-02-26 01:59:38]  workdir=None
[2025-02-26 01:59:38] ]
[2025-02-26 01:59:38] 2025-02-26 06:59:10,575 | INFO     | transferring file log.43401171._002288.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6531533520/log.43401171._002288.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-26 01:59:38] 2025-02-26 06:59:10,576 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6531533520/log.43401171._002288.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401171._002288.job
[2025-02-26 01:59:38] 2025-02-26 06:59:10,599 | INFO     | adding to output.list: log.43401171._002288.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/02/log.43401171._002288.job.log.tg
[2025-02-26 01:59:38] 2025-02-26 06:59:10,600 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 01:59:38] 2025-02-26 06:59:10,600 | INFO     | summary of transferred files:
[2025-02-26 01:59:38] 2025-02-26 06:59:10,600 | INFO     |  -- lfn=log.43401171._002288.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 01:59:38] 2025-02-26 06:59:10,601 | INFO     | stage-out finished correctly
[2025-02-26 01:59:38] 2025-02-26 06:59:11,764 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 01:59:38] 2025-02-26 06:59:12,734 | INFO     | job 6531533520 has state=finished
[2025-02-26 01:59:38] 2025-02-26 06:59:12,734 | INFO     | preparing for final server update for job 6531533520 in state='finished'
[2025-02-26 01:59:38] 2025-02-26 06:59:12,735 | INFO     | this job has now completed (state=finished)
[2025-02-26 01:59:38] 2025-02-26 06:59:12,735 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 01:59:38] 2025-02-26 06:59:12,735 | INFO     | log transfer has been attempted: DONE
[2025-02-26 01:59:38] 2025-02-26 06:59:12,735 | INFO     | job 6531533520 has finished - writing final server update
[2025-02-26 01:59:38] 2025-02-26 06:59:12,736 | INFO     | total number of processed events: 400 (read)
[2025-02-26 01:59:38] 2025-02-26 06:59:12,737 | INFO     | executing command: lscpu
[2025-02-26 01:59:38] 2025-02-26 06:59:12,763 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-26 01:59:38] 2025-02-26 06:59:12,779 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 01:59:38] 2025-02-26 06:59:18,438 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-26 01:59:38] 2025-02-26 06:59:18,443 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531533520/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,444 | INFO     | extracted standard info from prmon json
[2025-02-26 01:59:38] 2025-02-26 06:59:18,445 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 01:59:38] 2025-02-26 06:59:18,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 01:59:38] 2025-02-26 06:59:18,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 01:59:38] 2025-02-26 06:59:18,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 01:59:38] 2025-02-26 06:59:18,447 | INFO     | fitting pss+swap vs Time
[2025-02-26 01:59:38] 2025-02-26 06:59:18,448 | INFO     | model: linear, x: [1740548709.0, 1740548770.0, 1740548831.0, 1740548892.0, 1740548953.0, 1740549014.0, 1740549075.0, 1740549136.0, 1740549197.0, 1740549258.0, 1740
[2025-02-26 01:59:38] 2025-02-26 06:59:18,448 | INFO     | sum of square deviations: 110960220.0
[2025-02-26 01:59:38] 2025-02-26 06:59:18,449 | INFO     | sum of deviations: 17992341375.999996
[2025-02-26 01:59:38] 2025-02-26 06:59:18,449 | INFO     | mean x: 1740550844.0
[2025-02-26 01:59:38] 2025-02-26 06:59:18,449 | INFO     | mean y: 2643636.4929577466
[2025-02-26 01:59:38] 2025-02-26 06:59:18,449 | INFO     | -- intersect: -282229898508.1866
[2025-02-26 01:59:38] 2025-02-26 06:59:18,449 | INFO     | intersect: -282229898508.1866
[2025-02-26 01:59:38] 2025-02-26 06:59:18,449 | INFO     | chi2: 2.2698164950433886
[2025-02-26 01:59:38] 2025-02-26 06:59:18,450 | INFO     | -- intersect: -282229898508.1866
[2025-02-26 01:59:38] 2025-02-26 06:59:18,450 | INFO     | current memory leak: 162.15 B/s (using 71 data points, chi2=2.27)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,450 | INFO     | ..............................
[2025-02-26 01:59:38] 2025-02-26 06:59:18,450 | INFO     | . Timing measurements:
[2025-02-26 01:59:38] 2025-02-26 06:59:18,451 | INFO     | . get job = 0 s
[2025-02-26 01:59:38] 2025-02-26 06:59:18,451 | INFO     | . initial setup = 2 s
[2025-02-26 01:59:38] 2025-02-26 06:59:18,451 | INFO     | . payload setup = 7 s
[2025-02-26 01:59:38] 2025-02-26 06:59:18,451 | INFO     | . stage-in = 0 s
[2025-02-26 01:59:38] 2025-02-26 06:59:18,451 | INFO     | . payload execution = 4746 s
[2025-02-26 01:59:38] 2025-02-26 06:59:18,451 | INFO     | . stage-out = 0 s
[2025-02-26 01:59:38] 2025-02-26 06:59:18,451 | INFO     | . log creation = 0 s
[2025-02-26 01:59:38] 2025-02-26 06:59:18,451 | INFO     | ..............................
[2025-02-26 01:59:38] 2025-02-26 06:59:18,514 | WARNING  | process 5467 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 01:59:38] 2025-02-26 06:59:18,520 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531533520/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,531 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531533520/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,543 | INFO     | 
[2025-02-26 01:59:38] 2025-02-26 06:59:18,543 | INFO     | job summary report
[2025-02-26 01:59:38] 2025-02-26 06:59:18,543 | INFO     | --------------------------------------------------
[2025-02-26 01:59:38] 2025-02-26 06:59:18,543 | INFO     | PanDA job id: 6531533520
[2025-02-26 01:59:38] 2025-02-26 06:59:18,543 | INFO     | task id: 43401171
[2025-02-26 01:59:38] 2025-02-26 06:59:18,545 | INFO     | errors: (none)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,545 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 01:59:38] 2025-02-26 06:59:18,545 | INFO     | pilot state: finished 
[2025-02-26 01:59:38] 2025-02-26 06:59:18,546 | INFO     | transexitcode: 0
[2025-02-26 01:59:38] 2025-02-26 06:59:18,546 | INFO     | exeerrorcode: 0
[2025-02-26 01:59:38] 2025-02-26 06:59:18,546 | INFO     | exeerrordiag: 
[2025-02-26 01:59:38] 2025-02-26 06:59:18,546 | INFO     | exitcode: 0
[2025-02-26 01:59:38] 2025-02-26 06:59:18,546 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3838212 B
[2025-02-26 01:59:38] 2025-02-26 06:59:18,547 | INFO     | exitmsg: OK
[2025-02-26 01:59:38] 2025-02-26 06:59:18,547 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16022 B
[2025-02-26 01:59:38] 2025-02-26 06:59:18,547 | INFO     | cpuconsumptiontime: 45073 s
[2025-02-26 01:59:38] 2025-02-26 06:59:18,548 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-26 01:59:38] 2025-02-26 06:59:18,548 | INFO     | nevents: 400
[2025-02-26 01:59:38] 2025-02-26 06:59:18,548 | INFO     | neventsw: 0
[2025-02-26 01:59:38] 2025-02-26 06:59:18,552 | INFO     | pid: 5467
[2025-02-26 01:59:38] 2025-02-26 06:59:18,553 | INFO     | pgrp: 5467
[2025-02-26 01:59:38] 2025-02-26 06:59:18,553 | INFO     | corecount: 12
[2025-02-26 01:59:38] 2025-02-26 06:59:18,553 | INFO     | event service: False
[2025-02-26 01:59:38] 2025-02-26 06:59:18,553 | INFO     | sizes: {0: 2370333, 1: 2370361, 6: 2370567, 11: 2370595, 4758: 2396593, 4760: 2405534, 4761: 2405718, 4767: 2405888}
[2025-02-26 01:59:38] 2025-02-26 06:59:18,554 | INFO     | --------------------------------------------------
[2025-02-26 01:59:38] 2025-02-26 06:59:18,554 | INFO     | 
[2025-02-26 01:59:38] 2025-02-26 06:59:18,554 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-26 01:59:38] 2025-02-26 06:59:18,567 | INFO     | sufficient remaining disk space (29355933696 B)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,567 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,568 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6531533520: 4137566 B (within 2537553920 B limit)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,568 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6531533520/HITS.43401171._002288.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,569 | INFO     | total size of present files: 0 B (workdir size: 4137566 B)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,569 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6531533520/HITS.43401171._002288.pool.root.1 since it does not exist
[2025-02-26 01:59:38] 2025-02-26 06:59:18,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,579 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,580 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,581 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 01:59:38] 2025-02-26 06:59:18,581 | INFO     | job 6531533520 has completed (purged errors)
[2025-02-26 01:59:38] 2025-02-26 06:59:18,581 | INFO     | overall cleanup function is called
[2025-02-26 01:59:38] 2025-02-26 06:59:18,628 | INFO     | number of running child processes to parent process 5467: 1
[2025-02-26 01:59:38] 2025-02-26 06:59:18,628 | INFO     | maximum number of monitored processes: 6
[2025-02-26 01:59:38] 2025-02-26 06:59:18,629 | INFO     | aborting job monitoring since job object (job id=6531533520) has expired
[2025-02-26 01:59:38] 2025-02-26 06:59:19,589 | INFO     | --- collectZombieJob: --- 10, [5467]
[2025-02-26 01:59:38] 2025-02-26 06:59:19,589 | INFO     | zombie collector waiting for pid 5467
[2025-02-26 01:59:38] 2025-02-26 06:59:19,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 01:59:38] 2025-02-26 06:59:19,589 | INFO     | collected zombie processes
[2025-02-26 01:59:38] 2025-02-26 06:59:19,589 | INFO     | will attempt to kill all subprocesses of pid=5467
[2025-02-26 01:59:38] 2025-02-26 06:59:19,651 | INFO     | process IDs to be killed: [5467] (in reverse order)
[2025-02-26 01:59:38] 2025-02-26 06:59:19,701 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 01:59:38] 2025-02-26 06:59:19,701 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 01:59:38] 2025-02-26 06:59:19,705 | INFO     | did not find any defunct processes belonging to 5467
[2025-02-26 01:59:38] 2025-02-26 06:59:19,708 | INFO     | did not find any defunct processes belonging to 5467
[2025-02-26 01:59:38] 2025-02-26 06:59:19,708 | INFO     | ready for new job
[2025-02-26 01:59:38] 2025-02-26 06:59:19,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 01:59:38] 2025-02-26 06:59:19,710 | INFO     | **************************************
[2025-02-26 01:59:38] 2025-02-26 06:59:19,710 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 01:59:38] 2025-02-26 06:59:19,710 | INFO     | **************************************
[2025-02-26 01:59:38] 2025-02-26 06:59:19,710 | INFO     | 
[2025-02-26 01:59:38] 2025-02-26 06:59:19,711 | INFO     | architecture information:
[2025-02-26 01:59:38] 2025-02-26 06:59:19,711 | INFO     | executing command: cat /etc/os-release
[2025-02-26 01:59:38] 2025-02-26 06:59:19,725 | INFO     | cat /etc/os-release:
[2025-02-26 01:59:38] NAME="CentOS Linux"
[2025-02-26 01:59:38] VERSION="7 (Core)"
[2025-02-26 01:59:38] ID="centos"
[2025-02-26 01:59:38] ID_LIKE="rhel fedora"
[2025-02-26 01:59:38] VERSION_ID="7"
[2025-02-26 01:59:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 01:59:38] ANSI_COLOR="0;31"
[2025-02-26 01:59:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 01:59:38] HOME_URL="https://www.centos.org/"
[2025-02-26 01:59:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 01:59:38] 
[2025-02-26 01:59:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 01:59:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 01:59:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 01:59:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 01:59:38] 
[2025-02-26 01:59:38] 2025-02-26 06:59:19,726 | INFO     | **************************************
[2025-02-26 01:59:38] 2025-02-26 06:59:20,229 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-26 01:59:38] 2025-02-26 06:59:20,245 | INFO     | sufficient remaining disk space (29360128000 B)
[2025-02-26 01:59:38] 2025-02-26 06:59:20,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 01:59:38] 2025-02-26 06:59:20,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 01:59:38] 2025-02-26 06:59:20,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 01:59:38] 2025-02-26 06:59:20,246 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 01:59:38] 2025-02-26 06:59:20,247 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 01:59:38] 2025-02-26 06:59:20,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 01:59:38] 2025-02-26 06:59:20,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 01:59:38] 2025-02-26 06:59:20,247 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 01:59:38] 2025-02-26 06:59:20,248 | INFO     | aborting loop
[2025-02-26 01:59:38] 2025-02-26 06:59:20,440 | INFO     | all data control threads have been joined
[2025-02-26 01:59:38] 2025-02-26 06:59:21,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 01:59:38] 2025-02-26 06:59:21,251 | INFO     | [job] retrieve thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:21,252 | INFO     | [job] queue monitor thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:21,253 | INFO     | [job] job monitor thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:21,282 | INFO     | [payload] validate_post thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:21,347 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:21,445 | INFO     | [data] control thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:21,563 | INFO     | [payload] failed_post thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:21,671 | INFO     | all payload control threads have been joined
[2025-02-26 01:59:38] 2025-02-26 06:59:21,769 | INFO     | all job control threads have been joined
[2025-02-26 01:59:38] 2025-02-26 06:59:21,988 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:21,988 | INFO     | [data] copytool_in thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:22,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 01:59:38] 2025-02-26 06:59:22,497 | INFO     | [job] validate thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:22,618 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:22,676 | INFO     | [payload] control thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:22,773 | INFO     | [job] control thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:23,201 | INFO     | [data] copytool_out thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:26,362 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:31,144 | INFO     | job.realtimelogging is not enabled
[2025-02-26 01:59:38] 2025-02-26 06:59:32,149 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 01:59:38] 2025-02-26 06:59:33,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559955048256)>', '<ExcThread(monitor, started 140558626445056)>']
[2025-02-26 01:59:38] 2025-02-26 06:59:33,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 01:59:38] 2025-02-26 06:59:33,310 | INFO     | [monitor] control thread has ended
[2025-02-26 01:59:38] 2025-02-26 06:59:38,068 | INFO     | all workflow threads have been joined
[2025-02-26 01:59:38] 2025-02-26 06:59:38,069 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 01:59:38] 2025-02-26 06:59:38,069 | INFO     | traces error code: 0
[2025-02-26 01:59:38] 2025-02-26 06:59:38,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 01:59:38] 2025-02-26 06:59:38,153 [wrapper] ==== pilot stdout END ====
[2025-02-26 01:59:38] 2025-02-26 06:59:38,157 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 01:59:38] 2025-02-26 06:59:38,161 [wrapper] pilotpid: 31370
[2025-02-26 01:59:38] 2025-02-26 06:59:38,164 [wrapper] Pilot exit status: 0
[2025-02-26 01:59:38] 2025-02-26 06:59:38,181 [wrapper] pandaids: 6531533520
[2025-02-26 01:59:38] 2025-02-26 06:59:38,225 [wrapper] cleanup supervisor_pilot 11523 31371
[2025-02-26 01:59:38] 2025-02-26 06:59:38,229 [wrapper] Test setup, not cleaning
[2025-02-26 01:59:38] 2025-02-26 06:59:38,237 [wrapper] apfmon messages muted
[2025-02-26 01:59:38] 2025-02-26 06:59:38,241 [wrapper] ==== wrapper stdout END ====
[2025-02-26 01:59:38] 2025-02-26 06:59:38,245 [wrapper] ==== wrapper stderr END ====
[2025-02-26 01:59:38]  *** Error codes and diagnostics ***
[2025-02-26 01:59:38]     "exeErrorCode": 0,
[2025-02-26 01:59:38]     "exeErrorDiag": "",
[2025-02-26 01:59:38]     "pilotErrorCode": 0,
[2025-02-26 01:59:38]     "pilotErrorDiag": "",
[2025-02-26 01:59:38]  *** Listing of results directory ***
[2025-02-26 01:59:38] total 433128
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas    491065 Feb 26 00:34 pilot3.tar.gz
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas      5118 Feb 26 00:38 queuedata.json
[2025-02-26 01:59:38] -rwx------ 1 boincer umatlas     35865 Feb 26 00:38 runpilot2-wrapper.sh
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas       100 Feb 26 00:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 01:59:38] -rwxr-xr-x 1 boincer umatlas      7986 Feb 26 00:39 run_atlas
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas       105 Feb 26 00:39 job.xml
[2025-02-26 01:59:38] -rw-r--r-- 2 boincer umatlas 252337844 Feb 26 00:39 EVNT.43401169._000081.pool.root.1
[2025-02-26 01:59:38] drwxrwx--x 2 boincer umatlas      4096 Feb 26 00:39 shared
[2025-02-26 01:59:38] -rw-r--r-- 2 boincer umatlas    503561 Feb 26 00:39 input.tar.gz
[2025-02-26 01:59:38] -rw-r--r-- 2 boincer umatlas     17569 Feb 26 00:39 start_atlas.sh
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas         0 Feb 26 00:39 boinc_lockfile
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas      2541 Feb 26 00:39 pandaJob.out
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas       424 Feb 26 00:39 setup.sh.local
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas    987490 Feb 26 00:39 agis_schedconf.cvmfs.json
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas   1573632 Feb 26 00:39 agis_ddmendpoints.agis.ALL.json
[2025-02-26 01:59:38] drwx------ 4 boincer umatlas      4096 Feb 26 00:39 pilot3
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas      5868 Feb 26 01:57 init_data.xml
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas        95 Feb 26 01:58 pilot_heartbeat.json
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas 185794196 Feb 26 01:58 HITS.43401171._002288.pool.root.1
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas      1056 Feb 26 01:59 memory_monitor_summary.json
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas       529 Feb 26 01:59 boinc_task_state.xml
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas    353914 Feb 26 01:59 log.43401171._002288.job.log.tgz.1
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas      7759 Feb 26 01:59 heartbeat.json
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas      8192 Feb 26 01:59 boinc_mmap_file
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas        27 Feb 26 01:59 wrapper_checkpoint.txt
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas      4410 Feb 26 01:59 pilotlog.txt
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas    449591 Feb 26 01:59 log.43401171._002288.job.log.1
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas       357 Feb 26 01:59 output.list
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas       620 Feb 26 01:59 runtime_log
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas    819200 Feb 26 01:59 result.tar.gz
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas       658 Feb 26 01:59 v9LODmIJP76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm7kgKDm9i0Adn.diag
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas     11015 Feb 26 01:59 runtime_log.err
[2025-02-26 01:59:38] -rw-r--r-- 1 boincer umatlas     22337 Feb 26 01:59 stderr.txt
[2025-02-26 01:59:38] HITS file was successfully produced:
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas 185794196 Feb 26 01:58 shared/HITS.pool.root.1
[2025-02-26 01:59:38]  *** Contents of shared directory: ***
[2025-02-26 01:59:38] total 429176
[2025-02-26 01:59:38] -rw-r--r-- 2 boincer umatlas 252337844 Feb 26 00:39 ATLAS.root_0
[2025-02-26 01:59:38] -rw-r--r-- 2 boincer umatlas    503561 Feb 26 00:39 input.tar.gz
[2025-02-26 01:59:38] -rw-r--r-- 2 boincer umatlas     17569 Feb 26 00:39 start_atlas.sh
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas 185794196 Feb 26 01:58 HITS.pool.root.1
[2025-02-26 01:59:38] -rw------- 1 boincer umatlas    819200 Feb 26 01:59 result.tar.gz
01:59:40 (27700): run_atlas exited; CPU time 45030.704768
01:59:40 (27700): called boinc_finish(0)

</stderr_txt>
]]>

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