Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-26 16:29:30 (4120): Detected: vboxwrapper 26206
2025-02-26 16:29:30 (4120): Detected: BOINC client v8.0.2
2025-02-26 16:29:30 (4120): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-02-26 16:29:31 (4120): Successfully copied 'init_data.xml' to the shared directory.
2025-02-26 16:29:31 (4120): Create VM. (boinc_3087a9f44a385658, slot#2)
2025-02-26 16:29:32 (4120): Setting Memory Size for VM. (6600MB)
2025-02-26 16:29:32 (4120): Setting CPU Count for VM. (4)
2025-02-26 16:29:32 (4120): Setting Chipset Options for VM.
2025-02-26 16:29:32 (4120): Setting Graphics Controller Options for VM.
2025-02-26 16:29:33 (4120): Setting Boot Options for VM.
2025-02-26 16:29:33 (4120): Setting Network Configuration for NAT.
2025-02-26 16:29:33 (4120): Enabling VM Network Access.
2025-02-26 16:29:33 (4120): Disabling USB Support for VM.
2025-02-26 16:29:34 (4120): Disabling COM Port Support for VM.
2025-02-26 16:29:34 (4120): Disabling LPT Port Support for VM.
2025-02-26 16:29:34 (4120): Disabling Audio Support for VM.
2025-02-26 16:29:35 (4120): Disabling Clipboard Support for VM.
2025-02-26 16:29:35 (4120): Disabling Drag and Drop Support for VM.
2025-02-26 16:29:35 (4120): Adding storage controller(s) to VM.
2025-02-26 16:29:35 (4120): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-26 16:29:36 (4120): Adding VirtualBox Guest Additions to VM.
2025-02-26 16:29:36 (4120): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-26 16:29:36 (4120): forwarding host port 59921 to guest port 80
2025-02-26 16:29:37 (4120): Enabling remote desktop for VM.
2025-02-26 16:29:37 (4120): Enabling shared directory for VM.
2025-02-26 16:29:38 (4120): Starting VM using VBoxManage interface. (boinc_3087a9f44a385658, slot#2)
2025-02-26 16:29:46 (4120): Successfully started VM. (PID = '12884')
2025-02-26 16:29:46 (4120): Reporting VM Process ID to BOINC.
2025-02-26 16:29:46 (4120): Guest Log: BIOS: VirtualBox 7.0.14
2025-02-26 16:29:46 (4120): Guest Log: CPUID EDX: 0x178bfbff
2025-02-26 16:29:46 (4120): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-26 16:29:46 (4120): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-26 16:29:46 (4120): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-26 16:29:46 (4120): Detected: Web Application Enabled (http://localhost:59921)
2025-02-26 16:29:46 (4120): Detected: Remote Desktop Enabled (localhost:59942)
2025-02-26 16:29:46 (4120): Preference change detected
2025-02-26 16:29:46 (4120): Setting CPU throttle for VM. (100%)
2025-02-26 16:29:46 (4120): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-26 16:29:48 (4120): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-26 16:29:48 (4120): Guest Log: BIOS: Booting from Hard Disk...
2025-02-26 16:29:50 (4120): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-26 16:29:50 (4120): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-26 16:29:50 (4120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-26 16:29:58 (4120): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-26 16:29:58 (4120): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-26 16:30:05 (4120): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-26 16:30:05 (4120): Guest Log: 00:00:00.000195 main     Log opened 2025-02-26T16:30:03.908189000Z
2025-02-26 16:30:05 (4120): Guest Log: 00:00:00.000302 main     OS Product: Linux
2025-02-26 16:30:05 (4120): Guest Log: 00:00:00.000331 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-26 16:30:05 (4120): Guest Log: 00:00:00.000391 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-26 16:30:05 (4120): Guest Log: 00:00:00.000421 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-26 16:30:05 (4120): Guest Log: 00:00:00.000422 main     Process ID: 1386
2025-02-26 16:30:05 (4120): Guest Log: 00:00:00.000422 main     Package type: LINUX_64BITS_GENERIC
2025-02-26 16:30:05 (4120): Guest Log: 00:00:00.001266 main     5.2.32 r132073 started. Verbose level = 0
2025-02-26 16:30:05 (4120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-26 16:30:05 (4120): Guest Log: [INFO] Mounting shared directory
2025-02-26 16:30:05 (4120): Guest Log: [INFO] Checking for init_data.xml
2025-02-26 16:30:10 (4120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-26 16:30:10 (4120): Guest Log: [INFO] Detected branch: prod
2025-02-26 16:30:10 (4120): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-26 16:30:10 (4120): Guest Log: Copying input files
2025-02-26 16:30:13 (4120): Guest Log: Copied input files into RunAtlas.
2025-02-26 16:30:13 (4120): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.130:3128 - will set in /etc/cvmfs/default.local
2025-02-26 16:30:23 (4120): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-26 16:30:23 (4120): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-26 16:30:23 (4120): Guest Log: 2.6.3.0 1661 0 31644 143077 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.130:3128 1
2025-02-26 16:30:23 (4120): Guest Log: copied the webapp to /var/www
2025-02-26 16:30:23 (4120): Guest Log: ATHENA_PROC_NUMBER=4
2025-02-26 16:30:23 (4120): Guest Log: ATHENA_CORE_NUMBER=4
2025-02-26 16:30:23 (4120): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-26 16:30:23 (4120): Guest Log:  *** Starting ATLAS job. (PandaID=6531137150 taskID=43401163) ***
2025-02-26 18:09:50 (4120): Status Report: Elapsed Time: '6000.000000'
2025-02-26 18:09:50 (4120): Status Report: CPU Time: '22152.640625'
2025-02-26 19:18:54 (4120): Guest Log:  *** Job finished ***
2025-02-26 19:18:54 (4120): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:40,607 | INFO     | [payload] execute_payloads thread has finished
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:41,011 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:45,060 | INFO     | [data] queue_monitor thread has finished
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:47,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060813551424)>', '<ExcThread(monitor, started 140060510885632)>']
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:47,387 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:47,387 | INFO     | [monitor] control thread has ended
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,254 | INFO     | all workflow threads have been joined
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,254 | INFO     | end of generic workflow (traces error code: 0)
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,254 | INFO     | traces error code: 0
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,597 [wrapper] ==== pilot stdout END ====
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,601 [wrapper] ==== wrapper stdout RESUME ====
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,605 [wrapper] pilotpid: 5968
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,609 [wrapper] Pilot exit status: 0
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,626 [wrapper] pandaids: 6531137150
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,653 [wrapper] cleanup supervisor_pilot  9848 5969
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,656 [wrapper] Test setup, not cleaning
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,664 [wrapper] apfmon messages muted
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,668 [wrapper] ==== wrapper stdout END ====
2025-02-26 19:18:54 (4120): Guest Log: 2025-02-26 19:18:52,672 [wrapper] ==== wrapper stderr END ====
2025-02-26 19:18:54 (4120): Guest Log:  *** Error codes and diagnostics ***
2025-02-26 19:18:54 (4120): Guest Log:     "exeErrorCode": 0,
2025-02-26 19:18:54 (4120): Guest Log:     "exeErrorDiag": "",
2025-02-26 19:18:54 (4120): Guest Log:     "pilotErrorCode": 0,
2025-02-26 19:18:54 (4120): Guest Log:     "pilotErrorDiag": "",
2025-02-26 19:18:54 (4120): Guest Log:  *** Listing of results directory ***
2025-02-26 19:18:54 (4120): Guest Log: total 184280
2025-02-26 19:18:54 (4120): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 23:28 queuedata.json
2025-02-26 19:18:54 (4120): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 23:30 runpilot2-wrapper.sh
2025-02-26 19:18:54 (4120): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 23:30 pilot3.tar.gz
2025-02-26 19:18:54 (4120): Guest Log: -rwxr-xr-x. 1 atlas atlas      9211 Feb 26 16:30 init_data.xml
2025-02-26 19:18:54 (4120): Guest Log: -rwxr-xr-x. 1 atlas atlas    503552 Feb 26 16:30 input.tar.gz
2025-02-26 19:18:54 (4120): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 26 16:30 start_atlas.sh
2025-02-26 19:18:54 (4120): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 16:30 EVNT.43401161._000087.pool.root.1 -> /data/./ATLAS.root_0
2025-02-26 19:18:54 (4120): Guest Log: -rw-r--r--. 1 atlas atlas      2538 Feb 26 16:30 pandaJob.out
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas       460 Feb 26 16:30 setup.sh.local
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas    990575 Feb 26 16:30 agis_schedconf.cvmfs.json
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas   1569202 Feb 26 16:30 agis_ddmendpoints.agis.ALL.json
2025-02-26 19:18:54 (4120): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 16:30 pilot3
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas 182723818 Feb 26 19:18 HITS.43401163._002197.pool.root.1
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 19:18 pilot_heartbeat.json
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas      1032 Feb 26 19:18 memory_monitor_summary.json
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas    272421 Feb 26 19:18 log.43401163._002197.job.log.tgz.1
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas      7732 Feb 26 19:18 heartbeat.json
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 26 19:18 pilotlog.txt
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas    853204 Feb 26 19:18 log.43401163._002197.job.log.1
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 19:18 output.list
2025-02-26 19:18:54 (4120): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 19:18 runtime_log
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas   1146880 Feb 26 19:18 result.tar.gz
2025-02-26 19:18:54 (4120): Guest Log: -rw-r--r--. 1 atlas atlas     11296 Feb 26 19:18 runtime_log.err
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas       655 Feb 26 19:18 gOlKDmfYJ76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXWxKDmuUqskn.diag
2025-02-26 19:18:54 (4120): Guest Log: Looking for outputfile HITS.43401163._002197.pool.root.1
2025-02-26 19:18:54 (4120): Guest Log: HITS file was successfully produced
2025-02-26 19:18:54 (4120): Guest Log: -rw-------. 1 atlas atlas 182723818 Feb 26 19:18 /home/atlas/RunAtlas/HITS.43401163._002197.pool.root.1
2025-02-26 19:18:54 (4120): Guest Log: Successfully finished the ATLAS job!
2025-02-26 19:18:54 (4120): Guest Log: Copying the results back to the shared directory!
2025-02-26 19:18:54 (4120): Guest Log:  *** Contents of shared directory: ***
2025-02-26 19:18:54 (4120): Guest Log: total 426472
2025-02-26 19:18:54 (4120): Guest Log: -rwxrwxrwx. 1 root root 252295001 Feb 26 16:29 ATLAS.root_0
2025-02-26 19:18:54 (4120): Guest Log: -rwxrwxrwx. 1 root root 182723818 Feb 26 19:18 HITS.pool.root.1
2025-02-26 19:18:54 (4120): Guest Log: -rwxrwxrwx. 1 root root      9211 Feb 26 16:29 init_data.xml
2025-02-26 19:18:54 (4120): Guest Log: -rwxrwxrwx. 1 root root    503552 Feb 26 04:53 input.tar.gz
2025-02-26 19:18:54 (4120): Guest Log: -rwxrwxrwx. 1 root root   1146880 Feb 26 19:18 result.tar.gz
2025-02-26 19:18:54 (4120): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 26 04:53 start_atlas.sh
2025-02-26 19:18:54 (4120): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-26 19:18:54 (4120): VM Completion File Detected.
2025-02-26 19:18:54 (4120): Powering off VM.
2025-02-26 19:18:56 (4120): Successfully stopped VM.
2025-02-26 19:18:56 (4120): Deregistering VM. (boinc_3087a9f44a385658, slot#2)
2025-02-26 19:18:56 (4120): Removing network bandwidth throttle group from VM.
2025-02-26 19:18:56 (4120): Removing VM from VirtualBox.
19:19:01 (4120): called boinc_finish(0)

</stderr_txt>
]]>

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