Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:27:23 (960611): wrapper (7.7.26015): starting
22:27:23 (960611): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 22:27:23] Arguments: --nthreads 8
[2025-02-25 22:27:23] Threads: 8
[2025-02-25 22:27:23] Checking for CVMFS
[2025-02-25 22:27:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 22:27:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 22:27:23] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 22:27:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 22:27:24] 2.11.5.0 364798 22161 313684 143061 1 374 8091346 37641217 33582 130560 0 188028 95.542 2388813 28174 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 22:27:24] CVMFS is ok
[2025-02-25 22:27:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 22:27:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 22:27:24] Further information can be found at the LHC@home message board.
[2025-02-25 22:27:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 22:27:24] Checking for apptainer binary...
[2025-02-25 22:27:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 22:27:24] Running /usr/bin/apptainer --version
[2025-02-25 22:27:24] apptainer version 1.3.6-1.el9
[2025-02-25 22:27:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 22:27:24] c6-12-27-2.aglt2.org
[2025-02-25 22:27:24] apptainer works
[2025-02-25 22:27:24] Set ATHENA_PROC_NUMBER=8
[2025-02-25 22:27:24] Set ATHENA_CORE_NUMBER=8
[2025-02-25 22:27:24] Starting ATLAS job with PandaID=6531062609
[2025-02-25 22:27:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 00:06:26]  *** The last 200 lines of the pilot log: ***
[2025-02-26 00:06:26]  filesize=327149
[2025-02-26 00:06:26]  filetype=log
[2025-02-26 00:06:26]  guid=d9f454b3-15ca-430c-886e-11c7563f6ec5
[2025-02-26 00:06:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 00:06:26]  is_altstaged=None
[2025-02-26 00:06:26]  is_tar=False
[2025-02-26 00:06:26]  lfn=log.43401155._001518.job.log.tgz.1
[2025-02-26 00:06:26]  mtime=0
[2025-02-26 00:06:26]  protocol_id=None
[2025-02-26 00:06:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 00:06:26]  replicas=None
[2025-02-26 00:06:26]  scope=mc23_13p6TeV
[2025-02-26 00:06:26]  status=None
[2025-02-26 00:06:26]  status_code=0
[2025-02-26 00:06:26]  storage_token=
[2025-02-26 00:06:26]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6531062609/log.43401155._001518.job.log.tgz.1
[2025-02-26 00:06:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/bb/log.43401155._001518.job.log.tgz.1
[2025-02-26 00:06:26]  workdir=None
[2025-02-26 00:06:26] ]
[2025-02-26 00:06:26] 2025-02-26 05:06:00,315 | INFO     | transferring file log.43401155._001518.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6531062609/log.43401155._001518.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-26 00:06:26] 2025-02-26 05:06:00,315 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6531062609/log.43401155._001518.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401155._001518.job
[2025-02-26 00:06:26] 2025-02-26 05:06:00,334 | INFO     | adding to output.list: log.43401155._001518.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/bb/log.43401155._001518.job.log.tg
[2025-02-26 00:06:26] 2025-02-26 05:06:00,335 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 00:06:26] 2025-02-26 05:06:00,335 | INFO     | summary of transferred files:
[2025-02-26 00:06:26] 2025-02-26 05:06:00,335 | INFO     |  -- lfn=log.43401155._001518.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 00:06:26] 2025-02-26 05:06:00,336 | INFO     | stage-out finished correctly
[2025-02-26 00:06:26] 2025-02-26 05:06:00,428 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 00:06:26] 2025-02-26 05:06:01,663 | INFO     | job 6531062609 has state=finished
[2025-02-26 00:06:26] 2025-02-26 05:06:01,663 | INFO     | preparing for final server update for job 6531062609 in state='finished'
[2025-02-26 00:06:26] 2025-02-26 05:06:01,663 | INFO     | this job has now completed (state=finished)
[2025-02-26 00:06:26] 2025-02-26 05:06:01,663 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 00:06:26] 2025-02-26 05:06:01,664 | INFO     | log transfer has been attempted: DONE
[2025-02-26 00:06:26] 2025-02-26 05:06:01,664 | INFO     | job 6531062609 has finished - writing final server update
[2025-02-26 00:06:26] 2025-02-26 05:06:01,664 | INFO     | total number of processed events: 400 (read)
[2025-02-26 00:06:26] 2025-02-26 05:06:01,683 | INFO     | executing command: lscpu
[2025-02-26 00:06:26] 2025-02-26 05:06:01,746 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-26 00:06:26] 2025-02-26 05:06:01,784 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 00:06:26] 2025-02-26 05:06:01,848 | INFO     | monitor loop #431: job 0:6531062609 is in state 'finished'
[2025-02-26 00:06:26] 2025-02-26 05:06:01,850 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 00:06:26] 2025-02-26 05:06:04,352 | INFO     | monitor loop #432: job 0:6531062609 is in state 'finished'
[2025-02-26 00:06:26] 2025-02-26 05:06:04,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 00:06:26] 2025-02-26 05:06:05,342 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-26 00:06:26] 2025-02-26 05:06:05,343 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6531062609/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 00:06:26] 2025-02-26 05:06:05,344 | INFO     | extracted standard info from prmon json
[2025-02-26 00:06:26] 2025-02-26 05:06:05,344 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 00:06:26] 2025-02-26 05:06:05,344 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 00:06:26] 2025-02-26 05:06:05,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 00:06:26] 2025-02-26 05:06:05,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 00:06:26] 2025-02-26 05:06:05,348 | INFO     | fitting pss+swap vs Time
[2025-02-26 00:06:26] 2025-02-26 05:06:05,348 | INFO     | model: linear, x: [1740540787.0, 1740540848.0, 1740540909.0, 1740540970.0, 1740541031.0, 1740541092.0, 1740541153.0, 1740541214.0, 1740541275.0, 1740541336.0, 1740
[2025-02-26 00:06:26] 2025-02-26 05:06:05,350 | INFO     | sum of square deviations: 226022842.5
[2025-02-26 00:06:26] 2025-02-26 05:06:05,350 | INFO     | sum of deviations: 25827061449.999996
[2025-02-26 00:06:26] 2025-02-26 05:06:05,351 | INFO     | mean x: 1740543501.5
[2025-02-26 00:06:26] 2025-02-26 05:06:05,351 | INFO     | mean y: 2107810.4
[2025-02-26 00:06:26] 2025-02-26 05:06:05,351 | INFO     | -- intersect: -198885418213.16403
[2025-02-26 00:06:26] 2025-02-26 05:06:05,351 | INFO     | intersect: -198885418213.16403
[2025-02-26 00:06:26] 2025-02-26 05:06:05,351 | INFO     | chi2: 2.2489666008592644
[2025-02-26 00:06:26] 2025-02-26 05:06:05,351 | INFO     | -- intersect: -198885418213.16403
[2025-02-26 00:06:26] 2025-02-26 05:06:05,351 | INFO     | current memory leak: 114.27 B/s (using 90 data points, chi2=2.25)
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | ..............................
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | . Timing measurements:
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | . get job = 0 s
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | . initial setup = 2 s
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | . payload setup = 5 s
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | . stage-in = 0 s
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | . payload execution = 5879 s
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | . stage-out = 0 s
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | . log creation = 0 s
[2025-02-26 00:06:26] 2025-02-26 05:06:05,352 | INFO     | ..............................
[2025-02-26 00:06:26] 2025-02-26 05:06:05,822 | INFO     | 
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | job summary report
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | --------------------------------------------------
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | PanDA job id: 6531062609
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | task id: 43401155
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | errors: (none)
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | pilot state: finished 
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | transexitcode: 0
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | exeerrorcode: 0
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | exeerrordiag: 
[2025-02-26 00:06:26] 2025-02-26 05:06:05,823 | INFO     | exitcode: 0
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | exitmsg: OK
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | cpuconsumptiontime: 38912 s
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | nevents: 400
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | neventsw: 0
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | pid: 976764
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | pgrp: 976764
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | corecount: 8
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | event service: False
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | sizes: {0: 2369553, 1: 2370409, 6: 2370615, 12: 2370643, 5889: 2397247, 5890: 2406372, 5895: 2406486}
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | --------------------------------------------------
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | 
[2025-02-26 00:06:26] 2025-02-26 05:06:05,824 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-26 00:06:26] 2025-02-26 05:06:05,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | job 6531062609 has completed (purged errors)
[2025-02-26 00:06:26] 2025-02-26 05:06:05,846 | INFO     | overall cleanup function is called
[2025-02-26 00:06:26] 2025-02-26 05:06:06,854 | INFO     | --- collectZombieJob: --- 10, [976764]
[2025-02-26 00:06:26] 2025-02-26 05:06:06,855 | INFO     | zombie collector waiting for pid 976764
[2025-02-26 00:06:26] 2025-02-26 05:06:06,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 00:06:26] 2025-02-26 05:06:06,855 | INFO     | collected zombie processes
[2025-02-26 00:06:26] 2025-02-26 05:06:06,855 | INFO     | will attempt to kill all subprocesses of pid=976764
[2025-02-26 00:06:26] 2025-02-26 05:06:07,062 | INFO     | process IDs to be killed: [976764] (in reverse order)
[2025-02-26 00:06:26] 2025-02-26 05:06:07,232 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 00:06:26] 2025-02-26 05:06:07,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 00:06:26] 2025-02-26 05:06:07,253 | INFO     | did not find any defunct processes belonging to 976764
[2025-02-26 00:06:26] 2025-02-26 05:06:07,273 | INFO     | did not find any defunct processes belonging to 976764
[2025-02-26 00:06:26] 2025-02-26 05:06:07,273 | INFO     | ready for new job
[2025-02-26 00:06:26] 2025-02-26 05:06:07,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 00:06:26] 2025-02-26 05:06:07,275 | INFO     | **************************************
[2025-02-26 00:06:26] 2025-02-26 05:06:07,277 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 00:06:26] 2025-02-26 05:06:07,277 | INFO     | **************************************
[2025-02-26 00:06:26] 2025-02-26 05:06:07,277 | INFO     | 
[2025-02-26 00:06:26] 2025-02-26 05:06:07,294 | INFO     | architecture information:
[2025-02-26 00:06:26] 2025-02-26 05:06:07,295 | INFO     | executing command: cat /etc/os-release
[2025-02-26 00:06:26] 2025-02-26 05:06:07,312 | INFO     | cat /etc/os-release:
[2025-02-26 00:06:26] NAME="CentOS Linux"
[2025-02-26 00:06:26] VERSION="7 (Core)"
[2025-02-26 00:06:26] ID="centos"
[2025-02-26 00:06:26] ID_LIKE="rhel fedora"
[2025-02-26 00:06:26] VERSION_ID="7"
[2025-02-26 00:06:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 00:06:26] ANSI_COLOR="0;31"
[2025-02-26 00:06:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 00:06:26] HOME_URL="https://www.centos.org/"
[2025-02-26 00:06:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 00:06:26] 
[2025-02-26 00:06:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 00:06:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 00:06:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 00:06:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 00:06:26] 
[2025-02-26 00:06:26] 2025-02-26 05:06:07,313 | INFO     | **************************************
[2025-02-26 00:06:26] 2025-02-26 05:06:07,815 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-26 00:06:26] 2025-02-26 05:06:07,833 | INFO     | sufficient remaining disk space (96462700544 B)
[2025-02-26 00:06:26] 2025-02-26 05:06:07,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 00:06:26] 2025-02-26 05:06:07,833 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 00:06:26] 2025-02-26 05:06:07,867 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 00:06:26] 2025-02-26 05:06:07,867 | INFO     | aborting loop
[2025-02-26 00:06:26] 2025-02-26 05:06:08,057 | INFO     | all payload control threads have been joined
[2025-02-26 00:06:26] 2025-02-26 05:06:08,255 | INFO     | all data control threads have been joined
[2025-02-26 00:06:26] 2025-02-26 05:06:08,373 | INFO     | all job control threads have been joined
[2025-02-26 00:06:26] 2025-02-26 05:06:08,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 00:06:26] 2025-02-26 05:06:08,600 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 00:06:26] 2025-02-26 05:06:08,600 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 00:06:26] 2025-02-26 05:06:08,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 00:06:26] 2025-02-26 05:06:08,838 | INFO     | [job] retrieve thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:08,872 | INFO     | [job] job monitor thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:09,012 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:09,062 | INFO     | [payload] control thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:09,185 | INFO     | [payload] failed_post thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:09,261 | INFO     | [data] control thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:09,378 | INFO     | [job] control thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:09,555 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:09,563 | INFO     | [data] copytool_in thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:10,198 | INFO     | [payload] validate_post thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:10,262 | INFO     | [job] validate thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:10,308 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:10,446 | INFO     | [data] copytool_out thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:10,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 00:06:26] 2025-02-26 05:06:11,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 00:06:26] 2025-02-26 05:06:11,460 | INFO     | [job] queue monitor thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:15,034 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:18,843 | INFO     | job.realtimelogging is not enabled
[2025-02-26 00:06:26] 2025-02-26 05:06:19,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 00:06:26] 2025-02-26 05:06:20,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693773018944)>', '<ExcThread(monitor, started 139693073102592)>']
[2025-02-26 00:06:26] 2025-02-26 05:06:21,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 00:06:26] 2025-02-26 05:06:21,660 | INFO     | [monitor] control thread has ended
[2025-02-26 00:06:26] 2025-02-26 05:06:25,941 | INFO     | all workflow threads have been joined
[2025-02-26 00:06:26] 2025-02-26 05:06:25,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 00:06:26] 2025-02-26 05:06:25,942 | INFO     | traces error code: 0
[2025-02-26 00:06:26] 2025-02-26 05:06:25,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 00:06:26] 2025-02-26 05:06:26,127 [wrapper] ==== pilot stdout END ====
[2025-02-26 00:06:26] 2025-02-26 05:06:26,130 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 00:06:26] 2025-02-26 05:06:26,132 [wrapper] pilotpid: 964476
[2025-02-26 00:06:26] 2025-02-26 05:06:26,134 [wrapper] Pilot exit status: 0
[2025-02-26 00:06:26] 2025-02-26 05:06:26,143 [wrapper] pandaids: 6531062609
[2025-02-26 00:06:26] 2025-02-26 05:06:26,238 [wrapper] cleanup supervisor_pilot 1619425 964477
[2025-02-26 00:06:26] 2025-02-26 05:06:26,241 [wrapper] Test setup, not cleaning
[2025-02-26 00:06:26] 2025-02-26 05:06:26,245 [wrapper] apfmon messages muted
[2025-02-26 00:06:26] 2025-02-26 05:06:26,247 [wrapper] ==== wrapper stdout END ====
[2025-02-26 00:06:26] 2025-02-26 05:06:26,250 [wrapper] ==== wrapper stderr END ====
[2025-02-26 00:06:26]  *** Error codes and diagnostics ***
[2025-02-26 00:06:26]     "exeErrorCode": 0,
[2025-02-26 00:06:26]     "exeErrorDiag": "",
[2025-02-26 00:06:26]     "pilotErrorCode": 0,
[2025-02-26 00:06:26]     "pilotErrorDiag": "",
[2025-02-26 00:06:26]  *** Listing of results directory ***
[2025-02-26 00:06:26] total 434292
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 17:04 pilot3.tar.gz
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 17:24 queuedata.json
[2025-02-26 00:06:26] -rwx------. 1 boincer umatlas     35865 Feb 25 17:25 runpilot2-wrapper.sh
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas       100 Feb 25 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 00:06:26] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 22:27 run_atlas
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas       105 Feb 25 22:27 job.xml
[2025-02-26 00:06:26] -rw-r--r--. 2 boincer umatlas 249232594 Feb 25 22:27 EVNT.43401153._000061.pool.root.1
[2025-02-26 00:06:26] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 22:27 start_atlas.sh
[2025-02-26 00:06:26] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 22:27 shared
[2025-02-26 00:06:26] -rw-r--r--. 2 boincer umatlas    503550 Feb 25 22:27 input.tar.gz
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas         0 Feb 25 22:27 boinc_lockfile
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas      2539 Feb 25 22:27 pandaJob.out
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas       467 Feb 25 22:27 setup.sh.local
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas    987482 Feb 25 22:27 agis_schedconf.cvmfs.json
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas   1573632 Feb 25 22:27 agis_ddmendpoints.agis.ALL.json
[2025-02-26 00:06:26] drwx------. 4 boincer umatlas      4096 Feb 25 22:27 pilot3
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas      6857 Feb 26 00:00 init_data.xml
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas       529 Feb 26 00:05 boinc_task_state.xml
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas 189896001 Feb 26 00:05 HITS.43401155._001518.pool.root.1
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas      1044 Feb 26 00:05 memory_monitor_summary.json
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas    327149 Feb 26 00:06 log.43401155._001518.job.log.tgz.1
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas        95 Feb 26 00:06 pilot_heartbeat.json
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas      7741 Feb 26 00:06 heartbeat.json
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas      8192 Feb 26 00:06 boinc_mmap_file
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas        27 Feb 26 00:06 wrapper_checkpoint.txt
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas      4287 Feb 26 00:06 pilotlog.txt
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas    568559 Feb 26 00:06 log.43401155._001518.job.log.1
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas       357 Feb 26 00:06 output.list
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas       620 Feb 26 00:06 runtime_log
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas    911360 Feb 26 00:06 result.tar.gz
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas     11428 Feb 26 00:06 runtime_log.err
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas       653 Feb 26 00:06 atgMDmTXI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmkJxKDmjHaH8m.diag
[2025-02-26 00:06:26] -rw-r--r--. 1 boincer umatlas     21228 Feb 26 00:06 stderr.txt
[2025-02-26 00:06:26] HITS file was successfully produced:
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas 189896001 Feb 26 00:05 shared/HITS.pool.root.1
[2025-02-26 00:06:26]  *** Contents of shared directory: ***
[2025-02-26 00:06:26] total 430252
[2025-02-26 00:06:26] -rw-r--r--. 2 boincer umatlas 249232594 Feb 25 22:27 ATLAS.root_0
[2025-02-26 00:06:26] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 22:27 start_atlas.sh
[2025-02-26 00:06:26] -rw-r--r--. 2 boincer umatlas    503550 Feb 25 22:27 input.tar.gz
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas 189896001 Feb 26 00:05 HITS.pool.root.1
[2025-02-26 00:06:26] -rw-------. 1 boincer umatlas    911360 Feb 26 00:06 result.tar.gz
00:06:27 (960611): run_atlas exited; CPU time 38884.284271
00:06:27 (960611): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN