Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:27:46 (968820): wrapper (7.7.26015): starting
22:27:46 (968820): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 22:27:46] Arguments: --nthreads 8
[2025-02-25 22:27:46] Threads: 8
[2025-02-25 22:27:46] Checking for CVMFS
[2025-02-25 22:27:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 22:27:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 22:27:47] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 22:27:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 22:27:47] 2.11.5.0 364798 22162 315220 143061 1 374 8095189 37641216 33859 130560 0 227229 96.262 2389505 28171 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 22:27:47] CVMFS is ok
[2025-02-25 22:27:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 22:27:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 22:27:47] Further information can be found at the LHC@home message board.
[2025-02-25 22:27:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 22:27:47] Checking for apptainer binary...
[2025-02-25 22:27:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 22:27:47] Running /usr/bin/apptainer --version
[2025-02-25 22:27:47] apptainer version 1.3.6-1.el9
[2025-02-25 22:27:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 22:27:47] c6-12-27-2.aglt2.org
[2025-02-25 22:27:47] apptainer works
[2025-02-25 22:27:47] Set ATHENA_PROC_NUMBER=8
[2025-02-25 22:27:47] Set ATHENA_CORE_NUMBER=8
[2025-02-25 22:27:47] Starting ATLAS job with PandaID=6531079586
[2025-02-25 22:27:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 00:00:07]  *** The last 200 lines of the pilot log: ***
[2025-02-26 00:00:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 00:00:07]  is_altstaged=None
[2025-02-26 00:00:07]  is_tar=False
[2025-02-26 00:00:07]  lfn=log.43401171._002133.job.log.tgz.1
[2025-02-26 00:00:07]  mtime=0
[2025-02-26 00:00:07]  protocol_id=None
[2025-02-26 00:00:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 00:00:07]  replicas=None
[2025-02-26 00:00:07]  scope=mc23_13p6TeV
[2025-02-26 00:00:07]  status=None
[2025-02-26 00:00:07]  status_code=0
[2025-02-26 00:00:07]  storage_token=
[2025-02-26 00:00:07]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6531079586/log.43401171._002133.job.log.tgz.1
[2025-02-26 00:00:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/14/log.43401171._002133.job.log.tgz.1
[2025-02-26 00:00:07]  workdir=None
[2025-02-26 00:00:07] ]
[2025-02-26 00:00:07] 2025-02-26 04:59:42,366 | INFO     | transferring file log.43401171._002133.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6531079586/log.43401171._002133.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-26 00:00:07] 2025-02-26 04:59:42,366 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6531079586/log.43401171._002133.job.log.tgz.1 /tmp/boinchome/slots/4/log.43401171._002133.job
[2025-02-26 00:00:07] 2025-02-26 04:59:42,384 | INFO     | adding to output.list: log.43401171._002133.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/14/log.43401171._002133.job.log.tg
[2025-02-26 00:00:07] 2025-02-26 04:59:42,385 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 00:00:07] 2025-02-26 04:59:42,385 | INFO     | summary of transferred files:
[2025-02-26 00:00:07] 2025-02-26 04:59:42,385 | INFO     |  -- lfn=log.43401171._002133.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 00:00:07] 2025-02-26 04:59:42,385 | INFO     | stage-out finished correctly
[2025-02-26 00:00:07] 2025-02-26 04:59:42,479 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 00:00:07] 2025-02-26 04:59:43,055 | INFO     | monitor loop #400: job 0:6531079586 is in state 'finished'
[2025-02-26 00:00:07] 2025-02-26 04:59:43,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 00:00:07] 2025-02-26 04:59:43,283 | INFO     | job 6531079586 has state=finished
[2025-02-26 00:00:07] 2025-02-26 04:59:43,283 | INFO     | preparing for final server update for job 6531079586 in state='finished'
[2025-02-26 00:00:07] 2025-02-26 04:59:43,363 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-26 00:00:07] 2025-02-26 04:59:43,364 | INFO     | this job has now completed (state=finished)
[2025-02-26 00:00:07] 2025-02-26 04:59:43,364 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 00:00:07] 2025-02-26 04:59:43,364 | INFO     | log transfer has been attempted: DONE
[2025-02-26 00:00:07] 2025-02-26 04:59:43,364 | INFO     | job 6531079586 has finished - writing final server update
[2025-02-26 00:00:07] 2025-02-26 04:59:43,364 | INFO     | total number of processed events: 400 (read)
[2025-02-26 00:00:07] 2025-02-26 04:59:43,370 | INFO     | executing command: lscpu
[2025-02-26 00:00:07] 2025-02-26 04:59:43,442 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-26 00:00:07] 2025-02-26 04:59:43,482 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 00:00:07] 2025-02-26 04:59:45,558 | INFO     | monitor loop #401: job 0:6531079586 is in state 'finished'
[2025-02-26 00:00:07] 2025-02-26 04:59:45,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 00:00:07] 2025-02-26 04:59:47,120 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-26 00:00:07] 2025-02-26 04:59:47,120 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6531079586/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 00:00:07] 2025-02-26 04:59:47,121 | INFO     | extracted standard info from prmon json
[2025-02-26 00:00:07] 2025-02-26 04:59:47,121 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 00:00:07] 2025-02-26 04:59:47,121 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 00:00:07] 2025-02-26 04:59:47,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 00:00:07] 2025-02-26 04:59:47,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 00:00:07] 2025-02-26 04:59:47,123 | INFO     | fitting pss+swap vs Time
[2025-02-26 00:00:07] 2025-02-26 04:59:47,123 | INFO     | model: linear, x: [1740540809.0, 1740540870.0, 1740540931.0, 1740540992.0, 1740541053.0, 1740541114.0, 1740541175.0, 1740541236.0, 1740541297.0, 1740541358.0, 1740
[2025-02-26 00:00:07] 2025-02-26 04:59:47,123 | INFO     | sum of square deviations: 177275882.0
[2025-02-26 00:00:07] 2025-02-26 04:59:47,123 | INFO     | sum of deviations: 19822208334.999996
[2025-02-26 00:00:07] 2025-02-26 04:59:47,123 | INFO     | mean x: 1740543310.0
[2025-02-26 00:00:07] 2025-02-26 04:59:47,123 | INFO     | mean y: 2127117.9277108433
[2025-02-26 00:00:07] 2025-02-26 04:59:47,123 | INFO     | -- intersect: -194617759793.20035
[2025-02-26 00:00:07] 2025-02-26 04:59:47,123 | INFO     | intersect: -194617759793.20035
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | chi2: 2.221839607022514
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | -- intersect: -194617759793.20035
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | current memory leak: 111.82 B/s (using 83 data points, chi2=2.22)
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | ..............................
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | . Timing measurements:
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | . get job = 0 s
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | . initial setup = 2 s
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | . payload setup = 5 s
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | . stage-in = 0 s
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | . payload execution = 5477 s
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | . stage-out = 0 s
[2025-02-26 00:00:07] 2025-02-26 04:59:47,124 | INFO     | . log creation = 0 s
[2025-02-26 00:00:07] 2025-02-26 04:59:47,125 | INFO     | ..............................
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | 
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | job summary report
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | --------------------------------------------------
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | PanDA job id: 6531079586
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | task id: 43401171
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | errors: (none)
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | pilot state: finished 
[2025-02-26 00:00:07] 2025-02-26 04:59:47,189 | INFO     | transexitcode: 0
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | exeerrorcode: 0
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | exeerrordiag: 
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | exitcode: 0
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | exitmsg: OK
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | cpuconsumptiontime: 36270 s
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | nevents: 400
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | neventsw: 0
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | pid: 991391
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | pgrp: 991391
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | corecount: 8
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | event service: False
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | sizes: {0: 2370157, 1: 2370412, 6: 2370618, 12: 2370646, 5486: 2397138, 5489: 2406263, 5493: 2406377}
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | --------------------------------------------------
[2025-02-26 00:00:07] 2025-02-26 04:59:47,190 | INFO     | 
[2025-02-26 00:00:07] 2025-02-26 04:59:47,191 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-02-26 00:00:07] 2025-02-26 04:59:47,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | job 6531079586 has completed (purged errors)
[2025-02-26 00:00:07] 2025-02-26 04:59:47,213 | INFO     | overall cleanup function is called
[2025-02-26 00:00:07] 2025-02-26 04:59:48,220 | INFO     | --- collectZombieJob: --- 10, [991391]
[2025-02-26 00:00:07] 2025-02-26 04:59:48,221 | INFO     | zombie collector waiting for pid 991391
[2025-02-26 00:00:07] 2025-02-26 04:59:48,221 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 00:00:07] 2025-02-26 04:59:48,221 | INFO     | collected zombie processes
[2025-02-26 00:00:07] 2025-02-26 04:59:48,221 | INFO     | will attempt to kill all subprocesses of pid=991391
[2025-02-26 00:00:07] 2025-02-26 04:59:48,512 | INFO     | process IDs to be killed: [991391] (in reverse order)
[2025-02-26 00:00:07] 2025-02-26 04:59:48,663 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 00:00:07] 2025-02-26 04:59:48,664 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 00:00:07] 2025-02-26 04:59:48,689 | INFO     | did not find any defunct processes belonging to 991391
[2025-02-26 00:00:07] 2025-02-26 04:59:48,713 | INFO     | did not find any defunct processes belonging to 991391
[2025-02-26 00:00:07] 2025-02-26 04:59:48,713 | INFO     | ready for new job
[2025-02-26 00:00:07] 2025-02-26 04:59:48,713 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 00:00:07] 2025-02-26 04:59:48,715 | INFO     | **************************************
[2025-02-26 00:00:07] 2025-02-26 04:59:48,715 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 00:00:07] 2025-02-26 04:59:48,715 | INFO     | **************************************
[2025-02-26 00:00:07] 2025-02-26 04:59:48,715 | INFO     | 
[2025-02-26 00:00:07] 2025-02-26 04:59:48,733 | INFO     | architecture information:
[2025-02-26 00:00:07] 2025-02-26 04:59:48,733 | INFO     | executing command: cat /etc/os-release
[2025-02-26 00:00:07] 2025-02-26 04:59:48,747 | INFO     | cat /etc/os-release:
[2025-02-26 00:00:07] NAME="CentOS Linux"
[2025-02-26 00:00:07] VERSION="7 (Core)"
[2025-02-26 00:00:07] ID="centos"
[2025-02-26 00:00:07] ID_LIKE="rhel fedora"
[2025-02-26 00:00:07] VERSION_ID="7"
[2025-02-26 00:00:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 00:00:07] ANSI_COLOR="0;31"
[2025-02-26 00:00:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 00:00:07] HOME_URL="https://www.centos.org/"
[2025-02-26 00:00:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 00:00:07] 
[2025-02-26 00:00:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 00:00:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 00:00:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 00:00:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 00:00:07] 
[2025-02-26 00:00:07] 2025-02-26 04:59:48,747 | INFO     | **************************************
[2025-02-26 00:00:07] 2025-02-26 04:59:49,250 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-02-26 00:00:07] 2025-02-26 04:59:49,268 | INFO     | sufficient remaining disk space (95784271872 B)
[2025-02-26 00:00:07] 2025-02-26 04:59:49,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 00:00:07] 2025-02-26 04:59:49,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 00:00:07] 2025-02-26 04:59:49,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 00:00:07] 2025-02-26 04:59:49,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 00:00:07] 2025-02-26 04:59:49,270 | INFO     | aborting loop
[2025-02-26 00:00:07] 2025-02-26 04:59:49,665 | INFO     | PID=975851 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-02-26 00:00:07] 2025-02-26 04:59:49,665 | INFO     | .. there are 49 such processes running
[2025-02-26 00:00:07] 2025-02-26 04:59:49,665 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 00:00:07] 2025-02-26 04:59:49,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 00:00:07] 2025-02-26 04:59:49,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 00:00:07] 2025-02-26 04:59:49,805 | INFO     | all payload control threads have been joined
[2025-02-26 00:00:07] 2025-02-26 04:59:50,164 | INFO     | all data control threads have been joined
[2025-02-26 00:00:07] 2025-02-26 04:59:50,174 | INFO     | all job control threads have been joined
[2025-02-26 00:00:07] 2025-02-26 04:59:50,274 | INFO     | [job] retrieve thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:50,274 | INFO     | [job] job monitor thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:50,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 00:00:07] 2025-02-26 04:59:50,505 | INFO     | [job] validate thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:50,811 | INFO     | [payload] control thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:50,939 | INFO     | [payload] validate_post thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:50,952 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:50,964 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:51,168 | INFO     | [data] control thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:51,180 | INFO     | [job] control thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:51,231 | INFO     | [data] copytool_in thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:51,395 | INFO     | [payload] failed_post thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:51,704 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:52,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 00:00:07] 2025-02-26 04:59:52,494 | INFO     | [data] copytool_out thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:53,203 | INFO     | [job] queue monitor thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:53,276 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 00:00:07] 2025-02-26 04:59:59,914 | INFO     | job.realtimelogging is not enabled
[2025-02-26 00:00:07] 2025-02-26 05:00:00,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 00:00:07] 2025-02-26 05:00:01,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139882433054528)>', '<ExcThread(monitor, started 139882076808960)>']
[2025-02-26 00:00:07] 2025-02-26 05:00:02,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 00:00:07] 2025-02-26 05:00:02,731 | INFO     | [monitor] control thread has ended
[2025-02-26 00:00:07] 2025-02-26 05:00:06,860 | INFO     | all workflow threads have been joined
[2025-02-26 00:00:07] 2025-02-26 05:00:06,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 00:00:07] 2025-02-26 05:00:06,860 | INFO     | traces error code: 0
[2025-02-26 00:00:07] 2025-02-26 05:00:06,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 00:00:07] 2025-02-26 05:00:07,055 [wrapper] ==== pilot stdout END ====
[2025-02-26 00:00:07] 2025-02-26 05:00:07,057 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 00:00:07] 2025-02-26 05:00:07,059 [wrapper] pilotpid: 975851
[2025-02-26 00:00:07] 2025-02-26 05:00:07,061 [wrapper] Pilot exit status: 0
[2025-02-26 00:00:07] 2025-02-26 05:00:07,069 [wrapper] pandaids: 6531079586
[2025-02-26 00:00:07] 2025-02-26 05:00:07,151 [wrapper] cleanup supervisor_pilot 1620651 975852
[2025-02-26 00:00:07] 2025-02-26 05:00:07,154 [wrapper] Test setup, not cleaning
[2025-02-26 00:00:07] 2025-02-26 05:00:07,158 [wrapper] apfmon messages muted
[2025-02-26 00:00:07] 2025-02-26 05:00:07,160 [wrapper] ==== wrapper stdout END ====
[2025-02-26 00:00:07] 2025-02-26 05:00:07,162 [wrapper] ==== wrapper stderr END ====
[2025-02-26 00:00:07]  *** Error codes and diagnostics ***
[2025-02-26 00:00:07]     "exeErrorCode": 0,
[2025-02-26 00:00:07]     "exeErrorDiag": "",
[2025-02-26 00:00:07]     "pilotErrorCode": 0,
[2025-02-26 00:00:07]     "pilotErrorDiag": "",
[2025-02-26 00:00:07]  *** Listing of results directory ***
[2025-02-26 00:00:07] total 426912
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 17:35 pilot3.tar.gz
[2025-02-26 00:00:07] -rwx------. 1 boincer umatlas     35865 Feb 25 17:38 runpilot2-wrapper.sh
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 17:38 queuedata.json
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas       100 Feb 25 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 00:00:07] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 22:27 run_atlas
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas       105 Feb 25 22:27 job.xml
[2025-02-26 00:00:07] -rw-r--r--. 2 boincer umatlas 249998870 Feb 25 22:27 EVNT.43401169._000085.pool.root.1
[2025-02-26 00:00:07] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 22:27 start_atlas.sh
[2025-02-26 00:00:07] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 22:27 shared
[2025-02-26 00:00:07] -rw-r--r--. 2 boincer umatlas    503551 Feb 25 22:27 input.tar.gz
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas         0 Feb 25 22:27 boinc_lockfile
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas      2542 Feb 25 22:27 pandaJob.out
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas       467 Feb 25 22:27 setup.sh.local
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas    987482 Feb 25 22:27 agis_schedconf.cvmfs.json
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas   1573632 Feb 25 22:27 agis_ddmendpoints.agis.ALL.json
[2025-02-26 00:00:07] drwx------. 4 boincer umatlas      4096 Feb 25 22:27 pilot3
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas      6857 Feb 25 23:57 init_data.xml
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas 181642693 Feb 25 23:59 HITS.43401171._002133.pool.root.1
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas        95 Feb 25 23:59 pilot_heartbeat.json
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas       529 Feb 25 23:59 boinc_task_state.xml
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas      1044 Feb 25 23:59 memory_monitor_summary.json
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas    321716 Feb 25 23:59 log.43401171._002133.job.log.tgz.1
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas      7738 Feb 25 23:59 heartbeat.json
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas      8192 Feb 26 00:00 boinc_mmap_file
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas        27 Feb 26 00:00 wrapper_checkpoint.txt
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas      4681 Feb 26 00:00 pilotlog.txt
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas    535429 Feb 26 00:00 log.43401171._002133.job.log.1
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas       357 Feb 26 00:00 output.list
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas       620 Feb 26 00:00 runtime_log
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas    880640 Feb 26 00:00 result.tar.gz
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas       653 Feb 26 00:00 V1eLDmRkI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmUSxKDmdyybun.diag
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas     11428 Feb 26 00:00 runtime_log.err
[2025-02-26 00:00:07] -rw-r--r--. 1 boincer umatlas     21538 Feb 26 00:00 stderr.txt
[2025-02-26 00:00:07] HITS file was successfully produced:
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas 181642693 Feb 25 23:59 shared/HITS.pool.root.1
[2025-02-26 00:00:07]  *** Contents of shared directory: ***
[2025-02-26 00:00:07] total 422908
[2025-02-26 00:00:07] -rw-r--r--. 2 boincer umatlas 249998870 Feb 25 22:27 ATLAS.root_0
[2025-02-26 00:00:07] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 22:27 start_atlas.sh
[2025-02-26 00:00:07] -rw-r--r--. 2 boincer umatlas    503551 Feb 25 22:27 input.tar.gz
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas 181642693 Feb 25 23:59 HITS.pool.root.1
[2025-02-26 00:00:07] -rw-------. 1 boincer umatlas    880640 Feb 26 00:00 result.tar.gz
00:00:08 (968820): run_atlas exited; CPU time 36276.233075
00:00:08 (968820): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN