Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:21:19 (11351): wrapper (7.7.26015): starting
22:21:19 (11351): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 22:21:19] Arguments: --nthreads 12
[2025-02-25 22:21:19] Threads: 12
[2025-02-25 22:21:19] Checking for CVMFS
[2025-02-25 22:21:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 22:21:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 22:21:20] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 22:21:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 22:21:20] 2.11.2.0 10400 293989 147356 143061 0 55 10578067 20275200 1 130560 0 24948621 99.986 7966780 40746 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 22:21:20] CVMFS is ok
[2025-02-25 22:21:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 22:21:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 22:21:20] Further information can be found at the LHC@home message board.
[2025-02-25 22:21:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 22:21:20] Checking for apptainer binary...
[2025-02-25 22:21:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 22:21:20] Running /usr/bin/apptainer --version
[2025-02-25 22:21:20] apptainer version 1.3.2-1.el7
[2025-02-25 22:21:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 22:21:21] c-205-26.aglt2.org
[2025-02-25 22:21:21] apptainer works
[2025-02-25 22:21:21] Set ATHENA_PROC_NUMBER=12
[2025-02-25 22:21:21] Set ATHENA_CORE_NUMBER=12
[2025-02-25 22:21:21] Starting ATLAS job with PandaID=6531061368
[2025-02-25 22:21:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 23:46:07]  *** The last 200 lines of the pilot log: ***
[2025-02-25 23:46:07]  protocol_id=None
[2025-02-25 23:46:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 23:46:07]  replicas=None
[2025-02-25 23:46:07]  scope=mc23_13p6TeV
[2025-02-25 23:46:07]  status=None
[2025-02-25 23:46:07]  status_code=0
[2025-02-25 23:46:07]  storage_token=
[2025-02-25 23:46:07]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6531061368/log.43401155._001010.job.log.tgz.1
[2025-02-25 23:46:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/f3/log.43401155._001010.job.log.tgz.1
[2025-02-25 23:46:07]  workdir=None
[2025-02-25 23:46:07] ]
[2025-02-25 23:46:07] 2025-02-26 04:45:43,305 | INFO     | transferring file log.43401155._001010.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6531061368/log.43401155._001010.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 23:46:07] 2025-02-26 04:45:43,305 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6531061368/log.43401155._001010.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401155._001010.job
[2025-02-25 23:46:07] 2025-02-26 04:45:43,328 | INFO     | adding to output.list: log.43401155._001010.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/f3/log.43401155._001010.job.log.tg
[2025-02-25 23:46:07] 2025-02-26 04:45:43,329 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 23:46:07] 2025-02-26 04:45:43,329 | INFO     | summary of transferred files:
[2025-02-25 23:46:07] 2025-02-26 04:45:43,330 | INFO     |  -- lfn=log.43401155._001010.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 23:46:07] 2025-02-26 04:45:43,330 | INFO     | stage-out finished correctly
[2025-02-25 23:46:07] 2025-02-26 04:45:46,185 | WARNING  | process 21330 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 23:46:07] 2025-02-26 04:45:46,186 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531061368/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:46:07] 2025-02-26 04:45:46,249 | INFO     | number of running child processes to parent process 21330: 1
[2025-02-25 23:46:07] 2025-02-26 04:45:46,249 | INFO     | maximum number of monitored processes: 6
[2025-02-25 23:46:07] 2025-02-26 04:45:46,487 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 23:46:07] 2025-02-26 04:45:48,753 | INFO     | monitor loop #369: job 0:6531061368 is in state 'finished'
[2025-02-25 23:46:07] 2025-02-26 04:45:48,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 23:46:07] 2025-02-26 04:45:49,403 | INFO     | job 6531061368 has state=finished
[2025-02-25 23:46:07] 2025-02-26 04:45:49,404 | INFO     | preparing for final server update for job 6531061368 in state='finished'
[2025-02-25 23:46:07] 2025-02-26 04:45:49,404 | INFO     | this job has now completed (state=finished)
[2025-02-25 23:46:07] 2025-02-26 04:45:49,404 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 23:46:07] 2025-02-26 04:45:49,405 | INFO     | log transfer has been attempted: DONE
[2025-02-25 23:46:07] 2025-02-26 04:45:49,405 | INFO     | job 6531061368 has finished - writing final server update
[2025-02-25 23:46:07] 2025-02-26 04:45:49,405 | INFO     | total number of processed events: 400 (read)
[2025-02-25 23:46:07] 2025-02-26 04:45:49,407 | INFO     | executing command: lscpu
[2025-02-25 23:46:07] 2025-02-26 04:45:49,432 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 23:46:07] 2025-02-26 04:45:49,446 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 23:46:07] 2025-02-26 04:45:50,613 | INFO     | PID=14951 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 23:46:07] 2025-02-26 04:45:51,256 | INFO     | monitor loop #370: job 0:6531061368 is in state 'finished'
[2025-02-25 23:46:07] 2025-02-26 04:45:51,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 23:46:07] 2025-02-26 04:45:53,764 | INFO     | monitor loop #371: job 0:6531061368 is in state 'finished'
[2025-02-25 23:46:07] 2025-02-26 04:45:53,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 23:46:07] 2025-02-26 04:45:54,099 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 23:46:07] 2025-02-26 04:45:54,100 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531061368/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:46:07] 2025-02-26 04:45:54,101 | INFO     | extracted standard info from prmon json
[2025-02-25 23:46:07] 2025-02-26 04:45:54,101 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 23:46:07] 2025-02-26 04:45:54,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 23:46:07] 2025-02-26 04:45:54,102 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 23:46:07] 2025-02-26 04:45:54,102 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 23:46:07] 2025-02-26 04:45:54,104 | INFO     | fitting pss+swap vs Time
[2025-02-25 23:46:07] 2025-02-26 04:45:54,105 | INFO     | model: linear, x: [1740540428.0, 1740540489.0, 1740540550.0, 1740540611.0, 1740540672.0, 1740540733.0, 1740540794.0, 1740540855.0, 1740540916.0, 1740540977.0, 1740
[2025-02-25 23:46:07] 2025-02-26 04:45:54,105 | INFO     | sum of square deviations: 136095575.0
[2025-02-25 23:46:07] 2025-02-26 04:45:54,105 | INFO     | sum of deviations: 18977753432.0
[2025-02-25 23:46:07] 2025-02-26 04:45:54,106 | INFO     | mean x: 1740542715.5
[2025-02-25 23:46:07] 2025-02-26 04:45:54,106 | INFO     | mean y: 2679385.052631579
[2025-02-25 23:46:07] 2025-02-26 04:45:54,106 | INFO     | -- intersect: -242706097095.17258
[2025-02-25 23:46:07] 2025-02-26 04:45:54,106 | INFO     | intersect: -242706097095.17258
[2025-02-25 23:46:07] 2025-02-26 04:45:54,107 | INFO     | chi2: 2.4608105201389163
[2025-02-25 23:46:07] 2025-02-26 04:45:54,107 | INFO     | -- intersect: -242706097095.17258
[2025-02-25 23:46:07] 2025-02-26 04:45:54,107 | INFO     | current memory leak: 139.44 B/s (using 76 data points, chi2=2.46)
[2025-02-25 23:46:07] 2025-02-26 04:45:54,107 | INFO     | ..............................
[2025-02-25 23:46:07] 2025-02-26 04:45:54,107 | INFO     | . Timing measurements:
[2025-02-25 23:46:07] 2025-02-26 04:45:54,108 | INFO     | . get job = 0 s
[2025-02-25 23:46:07] 2025-02-26 04:45:54,108 | INFO     | . initial setup = 2 s
[2025-02-25 23:46:07] 2025-02-26 04:45:54,108 | INFO     | . payload setup = 7 s
[2025-02-25 23:46:07] 2025-02-26 04:45:54,108 | INFO     | . stage-in = 0 s
[2025-02-25 23:46:07] 2025-02-26 04:45:54,108 | INFO     | . payload execution = 5019 s
[2025-02-25 23:46:07] 2025-02-26 04:45:54,108 | INFO     | . stage-out = 0 s
[2025-02-25 23:46:07] 2025-02-26 04:45:54,108 | INFO     | . log creation = 0 s
[2025-02-25 23:46:07] 2025-02-26 04:45:54,108 | INFO     | ..............................
[2025-02-25 23:46:07] 2025-02-26 04:45:54,189 | INFO     | 
[2025-02-25 23:46:07] 2025-02-26 04:45:54,189 | INFO     | job summary report
[2025-02-25 23:46:07] 2025-02-26 04:45:54,189 | INFO     | --------------------------------------------------
[2025-02-25 23:46:07] 2025-02-26 04:45:54,189 | INFO     | PanDA job id: 6531061368
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | task id: 43401155
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | errors: (none)
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | pilot state: finished 
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | transexitcode: 0
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | exeerrorcode: 0
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | exeerrordiag: 
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | exitcode: 0
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | exitmsg: OK
[2025-02-25 23:46:07] 2025-02-26 04:45:54,190 | INFO     | cpuconsumptiontime: 47605 s
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | nevents: 400
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | neventsw: 0
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | pid: 21330
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | pgrp: 21330
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | corecount: 12
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | event service: False
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | sizes: {0: 2370381, 5: 2370587, 11: 2370643, 5030: 2396782, 5033: 2405723, 5036: 2405779, 5043: 2406077}
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | --------------------------------------------------
[2025-02-25 23:46:07] 2025-02-26 04:45:54,191 | INFO     | 
[2025-02-25 23:46:07] 2025-02-26 04:45:54,192 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 23:46:07] 2025-02-26 04:45:54,215 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,216 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,216 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,216 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,216 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,216 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,217 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,217 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,217 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,217 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,218 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 23:46:07] 2025-02-26 04:45:54,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,219 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 23:46:07] 2025-02-26 04:45:54,219 | INFO     | job 6531061368 has completed (purged errors)
[2025-02-25 23:46:07] 2025-02-26 04:45:54,219 | INFO     | overall cleanup function is called
[2025-02-25 23:46:07] 2025-02-26 04:45:55,227 | INFO     | --- collectZombieJob: --- 10, [21330]
[2025-02-25 23:46:07] 2025-02-26 04:45:55,228 | INFO     | zombie collector waiting for pid 21330
[2025-02-25 23:46:07] 2025-02-26 04:45:55,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 23:46:07] 2025-02-26 04:45:55,228 | INFO     | collected zombie processes
[2025-02-25 23:46:07] 2025-02-26 04:45:55,228 | INFO     | will attempt to kill all subprocesses of pid=21330
[2025-02-25 23:46:07] 2025-02-26 04:45:55,294 | INFO     | process IDs to be killed: [21330] (in reverse order)
[2025-02-25 23:46:07] 2025-02-26 04:45:55,344 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 23:46:07] 2025-02-26 04:45:55,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 23:46:07] 2025-02-26 04:45:55,348 | INFO     | did not find any defunct processes belonging to 21330
[2025-02-25 23:46:07] 2025-02-26 04:45:55,351 | INFO     | did not find any defunct processes belonging to 21330
[2025-02-25 23:46:07] 2025-02-26 04:45:55,351 | INFO     | ready for new job
[2025-02-25 23:46:07] 2025-02-26 04:45:55,351 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 23:46:07] 2025-02-26 04:45:55,353 | INFO     | **************************************
[2025-02-25 23:46:07] 2025-02-26 04:45:55,353 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 23:46:07] 2025-02-26 04:45:55,353 | INFO     | **************************************
[2025-02-25 23:46:07] 2025-02-26 04:45:55,353 | INFO     | 
[2025-02-25 23:46:07] 2025-02-26 04:45:55,354 | INFO     | architecture information:
[2025-02-25 23:46:07] 2025-02-26 04:45:55,354 | INFO     | executing command: cat /etc/os-release
[2025-02-25 23:46:07] 2025-02-26 04:45:55,369 | INFO     | cat /etc/os-release:
[2025-02-25 23:46:07] NAME="CentOS Linux"
[2025-02-25 23:46:07] VERSION="7 (Core)"
[2025-02-25 23:46:07] ID="centos"
[2025-02-25 23:46:07] ID_LIKE="rhel fedora"
[2025-02-25 23:46:07] VERSION_ID="7"
[2025-02-25 23:46:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 23:46:07] ANSI_COLOR="0;31"
[2025-02-25 23:46:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 23:46:07] HOME_URL="https://www.centos.org/"
[2025-02-25 23:46:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 23:46:07] 
[2025-02-25 23:46:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 23:46:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 23:46:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 23:46:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 23:46:07] 
[2025-02-25 23:46:07] 2025-02-26 04:45:55,370 | INFO     | **************************************
[2025-02-25 23:46:07] 2025-02-26 04:45:55,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 23:46:07] 2025-02-26 04:45:55,889 | INFO     | sufficient remaining disk space (29362225152 B)
[2025-02-25 23:46:07] 2025-02-26 04:45:55,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 23:46:07] 2025-02-26 04:45:55,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 23:46:07] 2025-02-26 04:45:55,890 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:46:07] 2025-02-26 04:45:56,267 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 23:46:07] 2025-02-26 04:45:56,267 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 23:46:07] 2025-02-26 04:45:56,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:46:07] 2025-02-26 04:45:56,277 | INFO     | will abort loop
[2025-02-25 23:46:07] 2025-02-26 04:45:56,281 | INFO     | all data control threads have been joined
[2025-02-25 23:46:07] 2025-02-26 04:45:56,310 | INFO     | all payload control threads have been joined
[2025-02-25 23:46:07] 2025-02-26 04:45:56,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 23:46:07] 2025-02-26 04:45:56,628 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 23:46:07] 2025-02-26 04:45:56,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 23:46:07] 2025-02-26 04:45:56,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 23:46:07] 2025-02-26 04:45:56,720 | INFO     | all job control threads have been joined
[2025-02-25 23:46:07] 2025-02-26 04:45:56,895 | INFO     | [job] retrieve thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:56,896 | INFO     | [job] queue monitor thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:56,954 | INFO     | [data] copytool_in thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 23:46:07] 2025-02-26 04:45:57,243 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,263 | INFO     | [job] validate thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,283 | INFO     | [job] job monitor thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,286 | INFO     | [data] control thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,316 | INFO     | [payload] control thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,481 | INFO     | [payload] failed_post thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,725 | INFO     | [job] control thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,761 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:57,875 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:58,183 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:58,372 | INFO     | [payload] validate_post thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:45:58,434 | INFO     | [data] copytool_out thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:46:01,086 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 23:46:07] 2025-02-26 04:46:02,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140385108248384)>', '<ExcThread(monitor, started 140384067897088)>']
[2025-02-25 23:46:07] 2025-02-26 04:46:02,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 23:46:07] 2025-02-26 04:46:02,659 | INFO     | [monitor] control thread has ended
[2025-02-25 23:46:07] 2025-02-26 04:46:07,216 | INFO     | all workflow threads have been joined
[2025-02-25 23:46:07] 2025-02-26 04:46:07,216 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 23:46:07] 2025-02-26 04:46:07,223 | INFO     | traces error code: 0
[2025-02-25 23:46:07] 2025-02-26 04:46:07,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 23:46:07] 2025-02-26 04:46:07,321 [wrapper] ==== pilot stdout END ====
[2025-02-25 23:46:07] 2025-02-26 04:46:07,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 23:46:07] 2025-02-26 04:46:07,329 [wrapper] pilotpid: 14951
[2025-02-25 23:46:07] 2025-02-26 04:46:07,332 [wrapper] Pilot exit status: 0
[2025-02-25 23:46:07] 2025-02-26 04:46:07,347 [wrapper] pandaids: 6531061368
[2025-02-25 23:46:07] 2025-02-26 04:46:07,382 [wrapper] cleanup supervisor_pilot  2542 14952
[2025-02-25 23:46:07] 2025-02-26 04:46:07,386 [wrapper] Test setup, not cleaning
[2025-02-25 23:46:07] 2025-02-26 04:46:07,394 [wrapper] apfmon messages muted
[2025-02-25 23:46:07] 2025-02-26 04:46:07,397 [wrapper] ==== wrapper stdout END ====
[2025-02-25 23:46:07] 2025-02-26 04:46:07,401 [wrapper] ==== wrapper stderr END ====
[2025-02-25 23:46:07]  *** Error codes and diagnostics ***
[2025-02-25 23:46:07]     "exeErrorCode": 0,
[2025-02-25 23:46:07]     "exeErrorDiag": "",
[2025-02-25 23:46:07]     "pilotErrorCode": 0,
[2025-02-25 23:46:07]     "pilotErrorDiag": "",
[2025-02-25 23:46:07]  *** Listing of results directory ***
[2025-02-25 23:46:07] total 430512
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 17:04 pilot3.tar.gz
[2025-02-25 23:46:07] -rwx------ 1 boincer umatlas     35865 Feb 25 17:24 runpilot2-wrapper.sh
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 17:24 queuedata.json
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas       100 Feb 25 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 23:46:07] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 22:21 run_atlas
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas       105 Feb 25 22:21 job.xml
[2025-02-25 23:46:07] -rw-r--r-- 2 boincer umatlas 253466498 Feb 25 22:21 EVNT.43401153._000041.pool.root.1
[2025-02-25 23:46:07] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 22:21 start_atlas.sh
[2025-02-25 23:46:07] drwxrwx--x 2 boincer umatlas      4096 Feb 25 22:21 shared
[2025-02-25 23:46:07] -rw-r--r-- 2 boincer umatlas    503552 Feb 25 22:21 input.tar.gz
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas         0 Feb 25 22:21 boinc_lockfile
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas      2539 Feb 25 22:21 pandaJob.out
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas       424 Feb 25 22:21 setup.sh.local
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas    987482 Feb 25 22:21 agis_schedconf.cvmfs.json
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas   1573632 Feb 25 22:21 agis_ddmendpoints.agis.ALL.json
[2025-02-25 23:46:07] drwx------ 4 boincer umatlas      4096 Feb 25 22:21 pilot3
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas      5867 Feb 25 23:45 init_data.xml
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas 181913320 Feb 25 23:45 HITS.43401155._001010.pool.root.1
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas       529 Feb 25 23:45 boinc_task_state.xml
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas        95 Feb 25 23:45 pilot_heartbeat.json
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas      1059 Feb 25 23:45 memory_monitor_summary.json
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas    362557 Feb 25 23:45 log.43401155._001010.job.log.tgz.1
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas      7763 Feb 25 23:45 heartbeat.json
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 23:46 boinc_mmap_file
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas        27 Feb 25 23:46 wrapper_checkpoint.txt
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas      4401 Feb 25 23:46 pilotlog.txt
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas    472143 Feb 25 23:46 log.43401155._001010.job.log.1
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas       357 Feb 25 23:46 output.list
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas       620 Feb 25 23:46 runtime_log
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas    849920 Feb 25 23:46 result.tar.gz
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 23:46 runtime_log.err
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas       658 Feb 25 23:46 Hl1MDmdWI76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmVVgKDmprmLpn.diag
[2025-02-25 23:46:07] -rw-r--r-- 1 boincer umatlas     21967 Feb 25 23:46 stderr.txt
[2025-02-25 23:46:07] HITS file was successfully produced:
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas 181913320 Feb 25 23:45 shared/HITS.pool.root.1
[2025-02-25 23:46:07]  *** Contents of shared directory: ***
[2025-02-25 23:46:07] total 426528
[2025-02-25 23:46:07] -rw-r--r-- 2 boincer umatlas 253466498 Feb 25 22:21 ATLAS.root_0
[2025-02-25 23:46:07] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 22:21 start_atlas.sh
[2025-02-25 23:46:07] -rw-r--r-- 2 boincer umatlas    503552 Feb 25 22:21 input.tar.gz
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas 181913320 Feb 25 23:45 HITS.pool.root.1
[2025-02-25 23:46:07] -rw------- 1 boincer umatlas    849920 Feb 25 23:46 result.tar.gz
23:46:08 (11351): run_atlas exited; CPU time 47534.124577
23:46:08 (11351): called boinc_finish(0)

</stderr_txt>
]]>

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