Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:09:00 (18386): wrapper (7.7.26015): starting
22:09:00 (18386): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 22:09:00] Arguments: --nthreads 8
[2025-02-25 22:09:00] Threads: 8
[2025-02-25 22:09:00] Checking for CVMFS
[2025-02-25 22:09:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 22:09:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 22:09:00] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 22:09:00] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/ligo.storage.igwn.org: Permission denied
[2025-02-25 22:09:00] 
[2025-02-25 22:09:00] CVMFS is ok
[2025-02-25 22:09:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 22:09:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 22:09:00] Further information can be found at the LHC@home message board.
[2025-02-25 22:09:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 22:09:00] Checking for apptainer binary...
[2025-02-25 22:09:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 22:09:00] Running /usr/bin/apptainer --version
[2025-02-25 22:09:00] apptainer version 1.3.2-1.el7
[2025-02-25 22:09:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 22:09:01] c-212-5.aglt2.org
[2025-02-25 22:09:01] apptainer works
[2025-02-25 22:09:01] Set ATHENA_PROC_NUMBER=8
[2025-02-25 22:09:01] Set ATHENA_CORE_NUMBER=8
[2025-02-25 22:09:01] Starting ATLAS job with PandaID=6531059558
[2025-02-25 22:09:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 23:18:24]  *** The last 200 lines of the pilot log: ***
[2025-02-25 23:18:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 23:18:24]  replicas=None
[2025-02-25 23:18:24]  scope=mc23_13p6TeV
[2025-02-25 23:18:24]  status=None
[2025-02-25 23:18:24]  status_code=0
[2025-02-25 23:18:24]  storage_token=
[2025-02-25 23:18:24]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6531059558/log.43401155._000456.job.log.tgz.1
[2025-02-25 23:18:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/46/log.43401155._000456.job.log.tgz.1
[2025-02-25 23:18:24]  workdir=None
[2025-02-25 23:18:24] ]
[2025-02-25 23:18:24] 2025-02-26 04:18:01,329 | INFO     | transferring file log.43401155._000456.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6531059558/log.43401155._000456.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 23:18:24] 2025-02-26 04:18:01,329 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6531059558/log.43401155._000456.job.log.tgz.1 /tmp/boinchome/slots/5/log.43401155._000456.job
[2025-02-25 23:18:24] 2025-02-26 04:18:01,347 | INFO     | adding to output.list: log.43401155._000456.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/46/log.43401155._000456.job.log.tg
[2025-02-25 23:18:24] 2025-02-26 04:18:01,348 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 23:18:24] 2025-02-26 04:18:01,348 | INFO     | summary of transferred files:
[2025-02-25 23:18:24] 2025-02-26 04:18:01,348 | INFO     |  -- lfn=log.43401155._000456.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 23:18:24] 2025-02-26 04:18:01,348 | INFO     | stage-out finished correctly
[2025-02-25 23:18:24] 2025-02-26 04:18:01,929 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 23:18:24] 2025-02-26 04:18:02,417 | INFO     | job 6531059558 has state=finished
[2025-02-25 23:18:24] 2025-02-26 04:18:02,418 | INFO     | preparing for final server update for job 6531059558 in state='finished'
[2025-02-25 23:18:24] 2025-02-26 04:18:02,418 | INFO     | this job has now completed (state=finished)
[2025-02-25 23:18:24] 2025-02-26 04:18:02,418 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 23:18:24] 2025-02-26 04:18:02,418 | INFO     | log transfer has been attempted: DONE
[2025-02-25 23:18:24] 2025-02-26 04:18:02,418 | INFO     | job 6531059558 has finished - writing final server update
[2025-02-25 23:18:24] 2025-02-26 04:18:02,418 | INFO     | total number of processed events: 400 (read)
[2025-02-25 23:18:24] 2025-02-26 04:18:02,422 | INFO     | executing command: lscpu
[2025-02-25 23:18:24] 2025-02-26 04:18:02,462 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-25 23:18:24] 2025-02-26 04:18:02,484 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 23:18:24] 2025-02-26 04:18:05,255 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-25 23:18:24] 2025-02-26 04:18:05,255 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6531059558/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:18:24] 2025-02-26 04:18:05,258 | INFO     | extracted standard info from prmon json
[2025-02-25 23:18:24] 2025-02-26 04:18:05,258 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 23:18:24] 2025-02-26 04:18:05,258 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 23:18:24] 2025-02-26 04:18:05,258 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 23:18:24] 2025-02-26 04:18:05,258 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 23:18:24] 2025-02-26 04:18:05,259 | INFO     | fitting pss+swap vs Time
[2025-02-25 23:18:24] 2025-02-26 04:18:05,259 | INFO     | model: linear, x: [1740539679.0, 1740539740.0, 1740539801.0, 1740539862.0, 1740539923.0, 1740539984.0, 1740540045.0, 1740540106.0, 1740540167.0, 1740540228.0, 1740
[2025-02-25 23:18:24] 2025-02-26 04:18:05,259 | INFO     | sum of square deviations: 70364110.0
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | sum of deviations: 20376698030.0
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | mean x: 1740541509.0
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | mean y: 2323857.6393442624
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | -- intersect: -504039988872.1532
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | intersect: -504039988872.1532
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | chi2: 2.510537727926967
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | -- intersect: -504039988872.1532
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | current memory leak: 289.59 B/s (using 61 data points, chi2=2.51)
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | ..............................
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | . Timing measurements:
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | . get job = 0 s
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | . initial setup = 2 s
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | . payload setup = 5 s
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | . stage-in = 0 s
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | . payload execution = 4107 s
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | . stage-out = 0 s
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | . log creation = 0 s
[2025-02-25 23:18:24] 2025-02-26 04:18:05,260 | INFO     | ..............................
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | 
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | job summary report
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | --------------------------------------------------
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | PanDA job id: 6531059558
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | task id: 43401155
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | errors: (none)
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | pilot state: finished 
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | transexitcode: 0
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | exeerrorcode: 0
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | exeerrordiag: 
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | exitcode: 0
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | exitmsg: OK
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | cpuconsumptiontime: 25859 s
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | nevents: 400
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | neventsw: 0
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | pid: 35687
[2025-02-25 23:18:24] 2025-02-26 04:18:05,361 | INFO     | pgrp: 35687
[2025-02-25 23:18:24] 2025-02-26 04:18:05,362 | INFO     | corecount: 8
[2025-02-25 23:18:24] 2025-02-26 04:18:05,362 | INFO     | event service: False
[2025-02-25 23:18:24] 2025-02-26 04:18:05,362 | INFO     | sizes: {0: 2370377, 4: 2370583, 11: 2370611, 4116: 2405382, 4117: 2405382, 4120: 2405552}
[2025-02-25 23:18:24] 2025-02-26 04:18:05,362 | INFO     | --------------------------------------------------
[2025-02-25 23:18:24] 2025-02-26 04:18:05,362 | INFO     | 
[2025-02-25 23:18:24] 2025-02-26 04:18:05,362 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,383 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,384 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 23:18:24] 2025-02-26 04:18:05,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,384 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 23:18:24] 2025-02-26 04:18:05,384 | INFO     | job 6531059558 has completed (purged errors)
[2025-02-25 23:18:24] 2025-02-26 04:18:05,384 | INFO     | overall cleanup function is called
[2025-02-25 23:18:24] 2025-02-26 04:18:05,420 | WARNING  | process 35687 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 23:18:24] 2025-02-26 04:18:05,744 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:18:24] 2025-02-26 04:18:05,745 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:18:24] 2025-02-26 04:18:05,745 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/5/PanDA_Pilot-6531059558/payload.stdout) since it has not been created yet
[2025-02-25 23:18:24] 2025-02-26 04:18:05,745 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-02-25 23:18:24] 2025-02-26 04:18:05,757 | INFO     | sufficient remaining disk space (104969797632 B)
[2025-02-25 23:18:24] 2025-02-26 04:18:05,757 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-25 23:18:24] 2025-02-26 04:18:05,757 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-6531059558/HITS.43401155._000456.pool.root.1 since it does not exist
[2025-02-25 23:18:24] 2025-02-26 04:18:05,922 | INFO     | number of running child processes to parent process 35687: 1
[2025-02-25 23:18:24] 2025-02-26 04:18:05,923 | INFO     | maximum number of monitored processes: 6
[2025-02-25 23:18:24] 2025-02-26 04:18:05,923 | INFO     | aborting job monitoring since job object (job id=6531059558) has expired
[2025-02-25 23:18:24] 2025-02-26 04:18:05,959 | INFO     | PID=24105 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-02-25 23:18:24] 2025-02-26 04:18:05,959 | INFO     | .. there are 39 such processes running
[2025-02-25 23:18:24] 2025-02-26 04:18:06,389 | INFO     | --- collectZombieJob: --- 10, [35687]
[2025-02-25 23:18:24] 2025-02-26 04:18:06,389 | INFO     | zombie collector waiting for pid 35687
[2025-02-25 23:18:24] 2025-02-26 04:18:06,389 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 23:18:24] 2025-02-26 04:18:06,389 | INFO     | collected zombie processes
[2025-02-25 23:18:24] 2025-02-26 04:18:06,389 | INFO     | will attempt to kill all subprocesses of pid=35687
[2025-02-25 23:18:24] 2025-02-26 04:18:06,535 | INFO     | process IDs to be killed: [35687] (in reverse order)
[2025-02-25 23:18:24] 2025-02-26 04:18:06,653 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 23:18:24] 2025-02-26 04:18:06,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 23:18:24] 2025-02-26 04:18:06,665 | INFO     | did not find any defunct processes belonging to 35687
[2025-02-25 23:18:24] 2025-02-26 04:18:06,673 | INFO     | did not find any defunct processes belonging to 35687
[2025-02-25 23:18:24] 2025-02-26 04:18:06,673 | INFO     | ready for new job
[2025-02-25 23:18:24] 2025-02-26 04:18:06,673 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 23:18:24] 2025-02-26 04:18:06,674 | INFO     | **************************************
[2025-02-25 23:18:24] 2025-02-26 04:18:06,674 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 23:18:24] 2025-02-26 04:18:06,674 | INFO     | **************************************
[2025-02-25 23:18:24] 2025-02-26 04:18:06,674 | INFO     | 
[2025-02-25 23:18:24] 2025-02-26 04:18:06,677 | INFO     | architecture information:
[2025-02-25 23:18:24] 2025-02-26 04:18:06,677 | INFO     | executing command: cat /etc/os-release
[2025-02-25 23:18:24] 2025-02-26 04:18:06,685 | INFO     | cat /etc/os-release:
[2025-02-25 23:18:24] NAME="CentOS Linux"
[2025-02-25 23:18:24] VERSION="7 (Core)"
[2025-02-25 23:18:24] ID="centos"
[2025-02-25 23:18:24] ID_LIKE="rhel fedora"
[2025-02-25 23:18:24] VERSION_ID="7"
[2025-02-25 23:18:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 23:18:24] ANSI_COLOR="0;31"
[2025-02-25 23:18:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 23:18:24] HOME_URL="https://www.centos.org/"
[2025-02-25 23:18:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 23:18:24] 
[2025-02-25 23:18:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 23:18:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 23:18:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 23:18:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 23:18:24] 
[2025-02-25 23:18:24] 2025-02-26 04:18:06,685 | INFO     | **************************************
[2025-02-25 23:18:24] 2025-02-26 04:18:07,188 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-02-25 23:18:24] 2025-02-26 04:18:07,202 | INFO     | sufficient remaining disk space (104969797632 B)
[2025-02-25 23:18:24] 2025-02-26 04:18:07,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 23:18:24] 2025-02-26 04:18:07,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 23:18:24] 2025-02-26 04:18:07,202 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:18:24] 2025-02-26 04:18:07,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:18:24] 2025-02-26 04:18:07,202 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 23:18:24] 2025-02-26 04:18:07,203 | INFO     | aborting loop
[2025-02-25 23:18:24] 2025-02-26 04:18:07,907 | INFO     | all job control threads have been joined
[2025-02-25 23:18:24] 2025-02-26 04:18:07,960 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 23:18:24] 2025-02-26 04:18:07,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 23:18:24] 2025-02-26 04:18:07,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 23:18:24] 2025-02-26 04:18:07,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 23:18:24] 2025-02-26 04:18:08,008 | INFO     | all data control threads have been joined
[2025-02-25 23:18:24] 2025-02-26 04:18:08,207 | INFO     | [job] queue monitor thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:08,207 | INFO     | [job] retrieve thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:08,208 | INFO     | [job] job monitor thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:08,219 | INFO     | all payload control threads have been joined
[2025-02-25 23:18:24] 2025-02-26 04:18:08,238 | INFO     | [payload] validate_post thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:08,265 | INFO     | [data] copytool_in thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:08,318 | INFO     | [payload] failed_post thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:08,908 | INFO     | [job] control thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:09,013 | INFO     | [data] control thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:09,205 | INFO     | [data] copytool_out thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:09,224 | INFO     | [payload] control thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:09,292 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:09,352 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:09,353 | INFO     | [job] validate thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:09,626 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:11,973 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:17,426 | INFO     | job.realtimelogging is not enabled
[2025-02-25 23:18:24] 2025-02-26 04:18:18,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 23:18:24] 2025-02-26 04:18:19,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429868988224)>', '<ExcThread(monitor, started 140429433489152)>']
[2025-02-25 23:18:24] 2025-02-26 04:18:20,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 23:18:24] 2025-02-26 04:18:20,007 | INFO     | [monitor] control thread has ended
[2025-02-25 23:18:24] 2025-02-26 04:18:24,467 | INFO     | all workflow threads have been joined
[2025-02-25 23:18:24] 2025-02-26 04:18:24,467 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 23:18:24] 2025-02-26 04:18:24,467 | INFO     | traces error code: 0
[2025-02-25 23:18:24] 2025-02-26 04:18:24,467 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 23:18:24] 2025-02-26 04:18:24,532 [wrapper] ==== pilot stdout END ====
[2025-02-25 23:18:24] 2025-02-26 04:18:24,534 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 23:18:24] 2025-02-26 04:18:24,537 [wrapper] pilotpid: 24105
[2025-02-25 23:18:24] 2025-02-26 04:18:24,539 [wrapper] Pilot exit status: 0
[2025-02-25 23:18:24] 2025-02-26 04:18:24,545 [wrapper] pandaids: 6531059558
[2025-02-25 23:18:24] 2025-02-26 04:18:24,607 [wrapper] cleanup supervisor_pilot 23978 24106
[2025-02-25 23:18:24] 2025-02-26 04:18:24,610 [wrapper] Test setup, not cleaning
[2025-02-25 23:18:24] 2025-02-26 04:18:24,614 [wrapper] apfmon messages muted
[2025-02-25 23:18:24] 2025-02-26 04:18:24,616 [wrapper] ==== wrapper stdout END ====
[2025-02-25 23:18:24] 2025-02-26 04:18:24,617 [wrapper] ==== wrapper stderr END ====
[2025-02-25 23:18:24]  *** Error codes and diagnostics ***
[2025-02-25 23:18:24]     "exeErrorCode": 0,
[2025-02-25 23:18:24]     "exeErrorDiag": "",
[2025-02-25 23:18:24]     "pilotErrorCode": 0,
[2025-02-25 23:18:24]     "pilotErrorDiag": "",
[2025-02-25 23:18:24]  *** Listing of results directory ***
[2025-02-25 23:18:24] total 434368
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 17:04 pilot3.tar.gz
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 17:21 queuedata.json
[2025-02-25 23:18:24] -rwx------ 1 boincer umatlas     35865 Feb 25 17:22 runpilot2-wrapper.sh
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas       100 Feb 25 22:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 23:18:24] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 22:08 run_atlas
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas       105 Feb 25 22:08 job.xml
[2025-02-25 23:18:24] -rw-r--r-- 2 boincer umatlas 251933827 Feb 25 22:09 EVNT.43401153._000019.pool.root.1
[2025-02-25 23:18:24] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 22:09 start_atlas.sh
[2025-02-25 23:18:24] drwxrwx--x 2 boincer umatlas      4096 Feb 25 22:09 shared
[2025-02-25 23:18:24] -rw-r--r-- 2 boincer umatlas    503549 Feb 25 22:09 input.tar.gz
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas         0 Feb 25 22:09 boinc_lockfile
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas      2537 Feb 25 22:09 pandaJob.out
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas       467 Feb 25 22:09 setup.sh.local
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas    987482 Feb 25 22:09 agis_schedconf.cvmfs.json
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas   1573632 Feb 25 22:09 agis_ddmendpoints.agis.ALL.json
[2025-02-25 23:18:24] drwx------ 4 boincer umatlas      4096 Feb 25 22:09 pilot3
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas        95 Feb 25 23:17 pilot_heartbeat.json
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas 187642410 Feb 25 23:17 HITS.43401155._000456.pool.root.1
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas       529 Feb 25 23:17 boinc_task_state.xml
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas      1084 Feb 25 23:17 memory_monitor_summary.json
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas    292323 Feb 25 23:18 log.43401155._000456.job.log.tgz.1
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas      7744 Feb 25 23:18 heartbeat.json
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas      6387 Feb 25 23:18 init_data.xml
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 23:18 boinc_mmap_file
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas        27 Feb 25 23:18 wrapper_checkpoint.txt
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas      4288 Feb 25 23:18 pilotlog.txt
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas    416972 Feb 25 23:18 log.43401155._000456.job.log.1
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas       357 Feb 25 23:18 output.list
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas       620 Feb 25 23:18 runtime_log
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas    727040 Feb 25 23:18 result.tar.gz
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas     11413 Feb 25 23:18 runtime_log.err
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas       656 Feb 25 23:18 NyOMDmQVI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiExKDmTmWMqm.diag
[2025-02-25 23:18:24] -rw-r--r-- 1 boincer umatlas     21825 Feb 25 23:18 stderr.txt
[2025-02-25 23:18:24] HITS file was successfully produced:
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas 187642410 Feb 25 23:17 shared/HITS.pool.root.1
[2025-02-25 23:18:24]  *** Contents of shared directory: ***
[2025-02-25 23:18:24] total 430508
[2025-02-25 23:18:24] -rw-r--r-- 2 boincer umatlas 251933827 Feb 25 22:09 ATLAS.root_0
[2025-02-25 23:18:24] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 22:09 start_atlas.sh
[2025-02-25 23:18:24] -rw-r--r-- 2 boincer umatlas    503549 Feb 25 22:09 input.tar.gz
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas 187642410 Feb 25 23:17 HITS.pool.root.1
[2025-02-25 23:18:24] -rw------- 1 boincer umatlas    727040 Feb 25 23:18 result.tar.gz
23:18:25 (18386): run_atlas exited; CPU time 25723.427456
23:18:25 (18386): called boinc_finish(0)

</stderr_txt>
]]>

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