Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:58:00 (29456): wrapper (7.7.26015): starting
21:58:00 (29456): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 21:58:00] Arguments: --nthreads 12
[2025-02-25 21:58:00] Threads: 12
[2025-02-25 21:58:00] Checking for CVMFS
[2025-02-25 21:58:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 21:58:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 21:58:00] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 21:58:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 21:58:00] 2.11.2.0 2980 219217 195612 143059 2 56 11840593 20275201 1 130560 0 24516393 99.991 6680219 39815 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 21:58:00] CVMFS is ok
[2025-02-25 21:58:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 21:58:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 21:58:00] Further information can be found at the LHC@home message board.
[2025-02-25 21:58:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 21:58:00] Checking for apptainer binary...
[2025-02-25 21:58:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 21:58:00] Running /usr/bin/apptainer --version
[2025-02-25 21:58:00] apptainer version 1.3.2-1.el7
[2025-02-25 21:58:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 21:58:02] c-205-10.aglt2.org
[2025-02-25 21:58:02] apptainer works
[2025-02-25 21:58:02] Set ATHENA_PROC_NUMBER=12
[2025-02-25 21:58:02] Set ATHENA_CORE_NUMBER=12
[2025-02-25 21:58:02] Starting ATLAS job with PandaID=6531061872
[2025-02-25 21:58:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 23:24:17]  *** The last 200 lines of the pilot log: ***
[2025-02-25 23:24:17]  guid=0506dbc2-5330-45b7-8875-768253963154
[2025-02-25 23:24:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 23:24:17]  is_altstaged=None
[2025-02-25 23:24:17]  is_tar=False
[2025-02-25 23:24:17]  lfn=log.43401155._001218.job.log.tgz.1
[2025-02-25 23:24:17]  mtime=0
[2025-02-25 23:24:17]  protocol_id=None
[2025-02-25 23:24:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 23:24:17]  replicas=None
[2025-02-25 23:24:17]  scope=mc23_13p6TeV
[2025-02-25 23:24:17]  status=None
[2025-02-25 23:24:17]  status_code=0
[2025-02-25 23:24:17]  storage_token=
[2025-02-25 23:24:17]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6531061872/log.43401155._001218.job.log.tgz.1
[2025-02-25 23:24:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/b9/log.43401155._001218.job.log.tgz.1
[2025-02-25 23:24:17]  workdir=None
[2025-02-25 23:24:17] ]
[2025-02-25 23:24:17] 2025-02-26 04:23:56,992 | INFO     | transferring file log.43401155._001218.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6531061872/log.43401155._001218.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 23:24:17] 2025-02-26 04:23:56,993 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6531061872/log.43401155._001218.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401155._001218.job
[2025-02-25 23:24:17] 2025-02-26 04:23:57,015 | INFO     | adding to output.list: log.43401155._001218.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/b9/log.43401155._001218.job.log.tg
[2025-02-25 23:24:17] 2025-02-26 04:23:57,016 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 23:24:17] 2025-02-26 04:23:57,016 | INFO     | summary of transferred files:
[2025-02-25 23:24:17] 2025-02-26 04:23:57,017 | INFO     |  -- lfn=log.43401155._001218.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 23:24:17] 2025-02-26 04:23:57,017 | INFO     | stage-out finished correctly
[2025-02-25 23:24:17] 2025-02-26 04:23:57,371 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 23:24:17] 2025-02-26 04:23:58,313 | INFO     | job 6531061872 has state=finished
[2025-02-25 23:24:17] 2025-02-26 04:23:58,313 | INFO     | preparing for final server update for job 6531061872 in state='finished'
[2025-02-25 23:24:17] 2025-02-26 04:23:58,313 | INFO     | this job has now completed (state=finished)
[2025-02-25 23:24:17] 2025-02-26 04:23:58,314 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 23:24:17] 2025-02-26 04:23:58,314 | INFO     | log transfer has been attempted: DONE
[2025-02-25 23:24:17] 2025-02-26 04:23:58,314 | INFO     | job 6531061872 has finished - writing final server update
[2025-02-25 23:24:17] 2025-02-26 04:23:58,314 | INFO     | total number of processed events: 400 (read)
[2025-02-25 23:24:17] 2025-02-26 04:23:58,316 | INFO     | executing command: lscpu
[2025-02-25 23:24:17] 2025-02-26 04:23:58,343 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 23:24:17] 2025-02-26 04:23:58,358 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 23:24:17] 2025-02-26 04:24:00,949 | INFO     | PID=642 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-02-25 23:24:17] 2025-02-26 04:24:03,419 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 23:24:17] 2025-02-26 04:24:03,419 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531061872/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:24:17] 2025-02-26 04:24:03,420 | INFO     | extracted standard info from prmon json
[2025-02-25 23:24:17] 2025-02-26 04:24:03,421 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 23:24:17] 2025-02-26 04:24:03,421 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 23:24:17] 2025-02-26 04:24:03,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 23:24:17] 2025-02-26 04:24:03,422 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 23:24:17] 2025-02-26 04:24:03,428 | INFO     | fitting pss+swap vs Time
[2025-02-25 23:24:17] 2025-02-26 04:24:03,428 | INFO     | model: linear, x: [1740539029.0, 1740539090.0, 1740539151.0, 1740539212.0, 1740539273.0, 1740539334.0, 1740539395.0, 1740539456.0, 1740539517.0, 1740539578.0, 1740
[2025-02-25 23:24:17] 2025-02-26 04:24:03,428 | INFO     | sum of square deviations: 141539398.0
[2025-02-25 23:24:17] 2025-02-26 04:24:03,429 | INFO     | sum of deviations: 30899235728.000004
[2025-02-25 23:24:17] 2025-02-26 04:24:03,429 | INFO     | mean x: 1740541347.0
[2025-02-25 23:24:17] 2025-02-26 04:24:03,430 | INFO     | mean y: 2527213.3766233767
[2025-02-25 23:24:17] 2025-02-26 04:24:03,430 | INFO     | -- intersect: -379972222822.5367
[2025-02-25 23:24:17] 2025-02-26 04:24:03,430 | INFO     | intersect: -379972222822.5367
[2025-02-25 23:24:17] 2025-02-26 04:24:03,430 | INFO     | chi2: 2.5763161853387255
[2025-02-25 23:24:17] 2025-02-26 04:24:03,430 | INFO     | -- intersect: -379972222822.5367
[2025-02-25 23:24:17] 2025-02-26 04:24:03,430 | INFO     | current memory leak: 218.31 B/s (using 77 data points, chi2=2.58)
[2025-02-25 23:24:17] 2025-02-26 04:24:03,431 | INFO     | ..............................
[2025-02-25 23:24:17] 2025-02-26 04:24:03,431 | INFO     | . Timing measurements:
[2025-02-25 23:24:17] 2025-02-26 04:24:03,431 | INFO     | . get job = 0 s
[2025-02-25 23:24:17] 2025-02-26 04:24:03,431 | INFO     | . initial setup = 2 s
[2025-02-25 23:24:17] 2025-02-26 04:24:03,431 | INFO     | . payload setup = 7 s
[2025-02-25 23:24:17] 2025-02-26 04:24:03,432 | INFO     | . stage-in = 0 s
[2025-02-25 23:24:17] 2025-02-26 04:24:03,432 | INFO     | . payload execution = 5113 s
[2025-02-25 23:24:17] 2025-02-26 04:24:03,432 | INFO     | . stage-out = 0 s
[2025-02-25 23:24:17] 2025-02-26 04:24:03,432 | INFO     | . log creation = 0 s
[2025-02-25 23:24:17] 2025-02-26 04:24:03,432 | INFO     | ..............................
[2025-02-25 23:24:17] 2025-02-26 04:24:03,495 | WARNING  | process 7225 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 23:24:17] 2025-02-26 04:24:03,496 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531061872/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:24:17] 2025-02-26 04:24:03,528 | INFO     | 
[2025-02-25 23:24:17] 2025-02-26 04:24:03,528 | INFO     | job summary report
[2025-02-25 23:24:17] 2025-02-26 04:24:03,529 | INFO     | --------------------------------------------------
[2025-02-25 23:24:17] 2025-02-26 04:24:03,529 | INFO     | PanDA job id: 6531061872
[2025-02-25 23:24:17] 2025-02-26 04:24:03,529 | INFO     | task id: 43401155
[2025-02-25 23:24:17] 2025-02-26 04:24:03,529 | INFO     | errors: (none)
[2025-02-25 23:24:17] 2025-02-26 04:24:03,529 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 23:24:17] 2025-02-26 04:24:03,529 | INFO     | pilot state: finished 
[2025-02-25 23:24:17] 2025-02-26 04:24:03,529 | INFO     | transexitcode: 0
[2025-02-25 23:24:17] 2025-02-26 04:24:03,530 | INFO     | exeerrorcode: 0
[2025-02-25 23:24:17] 2025-02-26 04:24:03,530 | INFO     | exeerrordiag: 
[2025-02-25 23:24:17] 2025-02-26 04:24:03,530 | INFO     | exitcode: 0
[2025-02-25 23:24:17] 2025-02-26 04:24:03,530 | INFO     | exitmsg: OK
[2025-02-25 23:24:17] 2025-02-26 04:24:03,530 | INFO     | cpuconsumptiontime: 48255 s
[2025-02-25 23:24:17] 2025-02-26 04:24:03,530 | INFO     | nevents: 400
[2025-02-25 23:24:17] 2025-02-26 04:24:03,530 | INFO     | neventsw: 0
[2025-02-25 23:24:17] 2025-02-26 04:24:03,531 | INFO     | pid: 7225
[2025-02-25 23:24:17] 2025-02-26 04:24:03,531 | INFO     | pgrp: 7225
[2025-02-25 23:24:17] 2025-02-26 04:24:03,531 | INFO     | corecount: 12
[2025-02-25 23:24:17] 2025-02-26 04:24:03,531 | INFO     | event service: False
[2025-02-25 23:24:17] 2025-02-26 04:24:03,531 | INFO     | sizes: {0: 2370381, 5: 2370587, 11: 2370643, 5125: 2396781, 5126: 2405722, 5127: 2405778, 5133: 2406076}
[2025-02-25 23:24:17] 2025-02-26 04:24:03,531 | INFO     | --------------------------------------------------
[2025-02-25 23:24:17] 2025-02-26 04:24:03,532 | INFO     | 
[2025-02-25 23:24:17] 2025-02-26 04:24:03,532 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 23:24:17] 2025-02-26 04:24:03,552 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,553 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,553 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,553 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,554 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,555 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 23:24:17] 2025-02-26 04:24:03,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,555 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 23:24:17] 2025-02-26 04:24:03,556 | INFO     | job 6531061872 has completed (purged errors)
[2025-02-25 23:24:17] 2025-02-26 04:24:03,556 | INFO     | overall cleanup function is called
[2025-02-25 23:24:17] 2025-02-26 04:24:03,563 | INFO     | number of running child processes to parent process 7225: 1
[2025-02-25 23:24:17] 2025-02-26 04:24:03,564 | INFO     | maximum number of monitored processes: 6
[2025-02-25 23:24:17] 2025-02-26 04:24:03,564 | INFO     | aborting job monitoring since job object (job id=6531061872) has expired
[2025-02-25 23:24:17] 2025-02-26 04:24:04,563 | INFO     | --- collectZombieJob: --- 10, [7225]
[2025-02-25 23:24:17] 2025-02-26 04:24:04,563 | INFO     | zombie collector waiting for pid 7225
[2025-02-25 23:24:17] 2025-02-26 04:24:04,564 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 23:24:17] 2025-02-26 04:24:04,564 | INFO     | collected zombie processes
[2025-02-25 23:24:17] 2025-02-26 04:24:04,564 | INFO     | will attempt to kill all subprocesses of pid=7225
[2025-02-25 23:24:17] 2025-02-26 04:24:04,627 | INFO     | process IDs to be killed: [7225] (in reverse order)
[2025-02-25 23:24:17] 2025-02-26 04:24:04,674 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 23:24:17] 2025-02-26 04:24:04,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 23:24:17] 2025-02-26 04:24:04,677 | INFO     | did not find any defunct processes belonging to 7225
[2025-02-25 23:24:17] 2025-02-26 04:24:04,680 | INFO     | did not find any defunct processes belonging to 7225
[2025-02-25 23:24:17] 2025-02-26 04:24:04,680 | INFO     | ready for new job
[2025-02-25 23:24:17] 2025-02-26 04:24:04,680 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 23:24:17] 2025-02-26 04:24:04,681 | INFO     | **************************************
[2025-02-25 23:24:17] 2025-02-26 04:24:04,681 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 23:24:17] 2025-02-26 04:24:04,681 | INFO     | **************************************
[2025-02-25 23:24:17] 2025-02-26 04:24:04,681 | INFO     | 
[2025-02-25 23:24:17] 2025-02-26 04:24:04,682 | INFO     | architecture information:
[2025-02-25 23:24:17] 2025-02-26 04:24:04,682 | INFO     | executing command: cat /etc/os-release
[2025-02-25 23:24:17] 2025-02-26 04:24:04,697 | INFO     | cat /etc/os-release:
[2025-02-25 23:24:17] NAME="CentOS Linux"
[2025-02-25 23:24:17] VERSION="7 (Core)"
[2025-02-25 23:24:17] ID="centos"
[2025-02-25 23:24:17] ID_LIKE="rhel fedora"
[2025-02-25 23:24:17] VERSION_ID="7"
[2025-02-25 23:24:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 23:24:17] ANSI_COLOR="0;31"
[2025-02-25 23:24:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 23:24:17] HOME_URL="https://www.centos.org/"
[2025-02-25 23:24:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 23:24:17] 
[2025-02-25 23:24:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 23:24:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 23:24:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 23:24:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 23:24:17] 
[2025-02-25 23:24:17] 2025-02-26 04:24:04,698 | INFO     | **************************************
[2025-02-25 23:24:17] 2025-02-26 04:24:05,201 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 23:24:17] 2025-02-26 04:24:05,335 | INFO     | sufficient remaining disk space (29353836544 B)
[2025-02-25 23:24:17] 2025-02-26 04:24:05,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 23:24:17] 2025-02-26 04:24:05,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 23:24:17] 2025-02-26 04:24:05,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:24:17] 2025-02-26 04:24:05,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 23:24:17] 2025-02-26 04:24:05,337 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:24:17] 2025-02-26 04:24:05,337 | INFO     | aborting loop
[2025-02-25 23:24:17] 2025-02-26 04:24:05,337 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 23:24:17] 2025-02-26 04:24:05,337 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 23:24:17] 2025-02-26 04:24:05,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 23:24:17] 2025-02-26 04:24:05,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 23:24:17] 2025-02-26 04:24:06,098 | INFO     | all payload control threads have been joined
[2025-02-25 23:24:17] 2025-02-26 04:24:06,276 | INFO     | all data control threads have been joined
[2025-02-25 23:24:17] 2025-02-26 04:24:06,341 | INFO     | [job] retrieve thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:06,342 | INFO     | [job] queue monitor thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:06,342 | INFO     | [job] job monitor thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:06,394 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:06,480 | INFO     | [payload] failed_post thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:06,563 | INFO     | [data] copytool_in thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:06,884 | INFO     | all job control threads have been joined
[2025-02-25 23:24:17] 2025-02-26 04:24:06,907 | INFO     | [job] validate thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,036 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,103 | INFO     | [payload] control thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,187 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,281 | INFO     | [data] control thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,341 | INFO     | [data] copytool_out thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,408 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,839 | INFO     | [payload] validate_post thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,889 | INFO     | [job] control thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:07,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 23:24:17] 2025-02-26 04:24:11,971 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 23:24:17] 2025-02-26 04:24:12,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325851035456)>', '<ExcThread(monitor, started 140324961773312)>']
[2025-02-25 23:24:17] 2025-02-26 04:24:12,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 23:24:17] 2025-02-26 04:24:12,374 | INFO     | [monitor] control thread has ended
[2025-02-25 23:24:17] 2025-02-26 04:24:17,040 | INFO     | all workflow threads have been joined
[2025-02-25 23:24:17] 2025-02-26 04:24:17,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 23:24:17] 2025-02-26 04:24:17,041 | INFO     | traces error code: 0
[2025-02-25 23:24:17] 2025-02-26 04:24:17,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 23:24:17] 2025-02-26 04:24:17,131 [wrapper] ==== pilot stdout END ====
[2025-02-25 23:24:17] 2025-02-26 04:24:17,135 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 23:24:17] 2025-02-26 04:24:17,139 [wrapper] pilotpid: 642
[2025-02-25 23:24:17] 2025-02-26 04:24:17,142 [wrapper] Pilot exit status: 0
[2025-02-25 23:24:17] 2025-02-26 04:24:17,157 [wrapper] pandaids: 6531061872
[2025-02-25 23:24:17] 2025-02-26 04:24:17,197 [wrapper] cleanup supervisor_pilot 21062 643
[2025-02-25 23:24:17] 2025-02-26 04:24:17,200 [wrapper] Test setup, not cleaning
[2025-02-25 23:24:17] 2025-02-26 04:24:17,208 [wrapper] apfmon messages muted
[2025-02-25 23:24:17] 2025-02-26 04:24:17,212 [wrapper] ==== wrapper stdout END ====
[2025-02-25 23:24:17] 2025-02-26 04:24:17,216 [wrapper] ==== wrapper stderr END ====
[2025-02-25 23:24:17]  *** Error codes and diagnostics ***
[2025-02-25 23:24:17]     "exeErrorCode": 0,
[2025-02-25 23:24:17]     "exeErrorDiag": "",
[2025-02-25 23:24:17]     "pilotErrorCode": 0,
[2025-02-25 23:24:17]     "pilotErrorDiag": "",
[2025-02-25 23:24:17]  *** Listing of results directory ***
[2025-02-25 23:24:17] total 438728
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 17:04 pilot3.tar.gz
[2025-02-25 23:24:17] -rwx------ 1 boincer umatlas     35865 Feb 25 17:24 runpilot2-wrapper.sh
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 17:24 queuedata.json
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas       100 Feb 25 21:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 23:24:17] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 21:57 run_atlas
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas       105 Feb 25 21:57 job.xml
[2025-02-25 23:24:17] -rw-r--r-- 2 boincer umatlas 253471021 Feb 25 21:57 EVNT.43401153._000049.pool.root.1
[2025-02-25 23:24:17] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 21:58 start_atlas.sh
[2025-02-25 23:24:17] drwxrwx--x 2 boincer umatlas      4096 Feb 25 21:58 shared
[2025-02-25 23:24:17] -rw-r--r-- 2 boincer umatlas    503550 Feb 25 21:58 input.tar.gz
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas         0 Feb 25 21:58 boinc_lockfile
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas      2539 Feb 25 21:58 pandaJob.out
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas       424 Feb 25 21:58 setup.sh.local
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas    987482 Feb 25 21:58 agis_schedconf.cvmfs.json
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas   1573632 Feb 25 21:58 agis_ddmendpoints.agis.ALL.json
[2025-02-25 23:24:17] drwx------ 4 boincer umatlas      4096 Feb 25 21:58 pilot3
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 23:19 init_data.xml
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas        95 Feb 25 23:23 pilot_heartbeat.json
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas 190287636 Feb 25 23:23 HITS.43401155._001218.pool.root.1
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas       530 Feb 25 23:23 boinc_task_state.xml
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas      1046 Feb 25 23:23 memory_monitor_summary.json
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas    373318 Feb 25 23:23 log.43401155._001218.job.log.tgz.1
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas      7760 Feb 25 23:24 heartbeat.json
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 23:24 boinc_mmap_file
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas        27 Feb 25 23:24 wrapper_checkpoint.txt
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas      4338 Feb 25 23:24 pilotlog.txt
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas    478666 Feb 25 23:24 log.43401155._001218.job.log.1
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas       357 Feb 25 23:24 output.list
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas       620 Feb 25 23:24 runtime_log
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas    870400 Feb 25 23:24 result.tar.gz
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 23:24 runtime_log.err
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas       658 Feb 25 23:24 m1zKDmdWI76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmbUgKDmmTnlEo.diag
[2025-02-25 23:24:17] -rw-r--r-- 1 boincer umatlas     21542 Feb 25 23:24 stderr.txt
[2025-02-25 23:24:17] HITS file was successfully produced:
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas 190287636 Feb 25 23:23 shared/HITS.pool.root.1
[2025-02-25 23:24:17]  *** Contents of shared directory: ***
[2025-02-25 23:24:17] total 434728
[2025-02-25 23:24:17] -rw-r--r-- 2 boincer umatlas 253471021 Feb 25 21:57 ATLAS.root_0
[2025-02-25 23:24:17] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 21:58 start_atlas.sh
[2025-02-25 23:24:17] -rw-r--r-- 2 boincer umatlas    503550 Feb 25 21:58 input.tar.gz
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas 190287636 Feb 25 23:23 HITS.pool.root.1
[2025-02-25 23:24:17] -rw------- 1 boincer umatlas    870400 Feb 25 23:24 result.tar.gz
23:24:18 (29456): run_atlas exited; CPU time 48190.330864
23:24:18 (29456): called boinc_finish(0)

</stderr_txt>
]]>

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