Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
09:44:45 (2472840): wrapper (7.7.26015): starting
09:44:45 (2472840): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 09:44:45] Arguments: --nthreads 12
[2025-02-26 09:44:45] Threads: 12
[2025-02-26 09:44:45] Checking for CVMFS
[2025-02-26 09:44:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 09:44:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 09:44:45] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 09:44:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 09:44:45] 2.12.6.0 1166473 1071 61680 143059 0 187 5296034 6291456 4561 130560 0 4451119 99.910 718001 280 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.11.5:3128 1
[2025-02-26 09:44:45] CVMFS is ok
[2025-02-26 09:44:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 09:44:45] Checking for apptainer binary...
[2025-02-26 09:44:45] apptainer is not installed, using version from CVMFS
[2025-02-26 09:44:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 09:44:45] pm111
[2025-02-26 09:44:45] apptainer works
[2025-02-26 09:44:45] Set ATHENA_PROC_NUMBER=12
[2025-02-26 09:44:45] Set ATHENA_CORE_NUMBER=12
[2025-02-26 09:44:45] Starting ATLAS job with PandaID=6531061284
[2025-02-26 09:44:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 11:15:24]  *** The last 200 lines of the pilot log: ***
[2025-02-26 11:15:24]  mtime=0
[2025-02-26 11:15:24]  protocol_id=None
[2025-02-26 11:15:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 11:15:24]  replicas=None
[2025-02-26 11:15:24]  scope=mc23_13p6TeV
[2025-02-26 11:15:24]  status=None
[2025-02-26 11:15:24]  status_code=0
[2025-02-26 11:15:24]  storage_token=
[2025-02-26 11:15:24]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-6531061284/log.43401155._000926.job.log.tgz.1
[2025-02-26 11:15:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/7c/log.43401155._000926.job.log.tgz.1
[2025-02-26 11:15:24]  workdir=None
[2025-02-26 11:15:24] ]
[2025-02-26 11:15:24] 2025-02-26 04:15:08,143 | INFO     | transferring file log.43401155._000926.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-6531061284/log.43401155._000926.job.log.tgz.1 to /var/lib/boinc
[2025-02-26 11:15:24] 2025-02-26 04:15:08,143 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-6531061284/log.43401155._000926.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.434011
[2025-02-26 11:15:24] 2025-02-26 04:15:08,153 | INFO     | adding to output.list: log.43401155._000926.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/7c/log.43401155._000926.job.log.tg
[2025-02-26 11:15:24] 2025-02-26 04:15:08,153 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 11:15:24] 2025-02-26 04:15:08,153 | INFO     | summary of transferred files:
[2025-02-26 11:15:24] 2025-02-26 04:15:08,154 | INFO     |  -- lfn=log.43401155._000926.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 11:15:24] 2025-02-26 04:15:08,154 | INFO     | stage-out finished correctly
[2025-02-26 11:15:24] 2025-02-26 04:15:09,111 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 11:15:24] 2025-02-26 04:15:09,218 | INFO     | job 6531061284 has state=finished
[2025-02-26 11:15:24] 2025-02-26 04:15:09,218 | INFO     | preparing for final server update for job 6531061284 in state='finished'
[2025-02-26 11:15:24] 2025-02-26 04:15:09,219 | INFO     | this job has now completed (state=finished)
[2025-02-26 11:15:24] 2025-02-26 04:15:09,220 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 11:15:24] 2025-02-26 04:15:09,220 | INFO     | log transfer has been attempted: DONE
[2025-02-26 11:15:24] 2025-02-26 04:15:09,220 | INFO     | job 6531061284 has finished - writing final server update
[2025-02-26 11:15:24] 2025-02-26 04:15:09,220 | INFO     | total number of processed events: 400 (read)
[2025-02-26 11:15:24] 2025-02-26 04:15:09,225 | INFO     | executing command: lscpu
[2025-02-26 11:15:24] 2025-02-26 04:15:09,258 | INFO     | found 36 cores (18 cores per socket, 2 sockets)
[2025-02-26 11:15:24] 2025-02-26 04:15:09,270 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 11:15:24] 2025-02-26 04:15:11,821 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 11:15:24] 2025-02-26 04:15:11,821 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6531061284/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 11:15:24] 2025-02-26 04:15:11,822 | INFO     | extracted standard info from prmon json
[2025-02-26 11:15:24] 2025-02-26 04:15:11,822 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 11:15:24] 2025-02-26 04:15:11,822 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 11:15:24] 2025-02-26 04:15:11,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 11:15:24] 2025-02-26 04:15:11,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 11:15:24] 2025-02-26 04:15:11,824 | INFO     | fitting pss+swap vs Time
[2025-02-26 11:15:24] 2025-02-26 04:15:11,824 | INFO     | model: linear, x: [1740538228.0, 1740538289.0, 1740538350.0, 1740538411.0, 1740538472.0, 1740538533.0, 1740538594.0, 1740538655.0, 1740538716.0, 1740538777.0, 1740
[2025-02-26 11:15:24] 2025-02-26 04:15:11,825 | INFO     | sum of square deviations: 170944600.5
[2025-02-26 11:15:24] 2025-02-26 04:15:11,825 | INFO     | sum of deviations: 6134339279.000002
[2025-02-26 11:15:24] 2025-02-26 04:15:11,825 | INFO     | mean x: 1740540698.5
[2025-02-26 11:15:24] 2025-02-26 04:15:11,825 | INFO     | mean y: 2678778.1463414636
[2025-02-26 11:15:24] 2025-02-26 04:15:11,825 | INFO     | -- intersect: -62456545685.66847
[2025-02-26 11:15:24] 2025-02-26 04:15:11,825 | INFO     | intersect: -62456545685.66847
[2025-02-26 11:15:24] 2025-02-26 04:15:11,825 | INFO     | chi2: 0.19223102816128773
[2025-02-26 11:15:24] 2025-02-26 04:15:11,825 | INFO     | -- intersect: -62456545685.66847
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | current memory leak: 35.88 B/s (using 82 data points, chi2=0.19)
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | ..............................
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | . Timing measurements:
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | . get job = 0 s
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | . initial setup = 4 s
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | . payload setup = 5 s
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | . stage-in = 0 s
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | . payload execution = 5384 s
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | . stage-out = 0 s
[2025-02-26 11:15:24] 2025-02-26 04:15:11,826 | INFO     | . log creation = 0 s
[2025-02-26 11:15:24] 2025-02-26 04:15:11,827 | INFO     | ..............................
[2025-02-26 11:15:24] 2025-02-26 04:15:11,915 | INFO     | 
[2025-02-26 11:15:24] 2025-02-26 04:15:11,915 | INFO     | job summary report
[2025-02-26 11:15:24] 2025-02-26 04:15:11,916 | INFO     | --------------------------------------------------
[2025-02-26 11:15:24] 2025-02-26 04:15:11,916 | INFO     | PanDA job id: 6531061284
[2025-02-26 11:15:24] 2025-02-26 04:15:11,916 | INFO     | task id: 43401155
[2025-02-26 11:15:24] 2025-02-26 04:15:11,916 | INFO     | errors: (none)
[2025-02-26 11:15:24] 2025-02-26 04:15:11,916 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 11:15:24] 2025-02-26 04:15:11,916 | INFO     | pilot state: finished 
[2025-02-26 11:15:24] 2025-02-26 04:15:11,917 | INFO     | transexitcode: 0
[2025-02-26 11:15:24] 2025-02-26 04:15:11,917 | INFO     | exeerrorcode: 0
[2025-02-26 11:15:24] 2025-02-26 04:15:11,917 | INFO     | exeerrordiag: 
[2025-02-26 11:15:24] 2025-02-26 04:15:11,917 | INFO     | exitcode: 0
[2025-02-26 11:15:24] 2025-02-26 04:15:11,917 | INFO     | exitmsg: OK
[2025-02-26 11:15:24] 2025-02-26 04:15:11,917 | INFO     | cpuconsumptiontime: 50600 s
[2025-02-26 11:15:24] 2025-02-26 04:15:11,917 | INFO     | nevents: 400
[2025-02-26 11:15:24] 2025-02-26 04:15:11,918 | INFO     | neventsw: 0
[2025-02-26 11:15:24] 2025-02-26 04:15:11,918 | INFO     | pid: 2485101
[2025-02-26 11:15:24] 2025-02-26 04:15:11,918 | INFO     | pgrp: 2485101
[2025-02-26 11:15:24] 2025-02-26 04:15:11,918 | INFO     | corecount: 12
[2025-02-26 11:15:24] 2025-02-26 04:15:11,918 | INFO     | event service: False
[2025-02-26 11:15:24] 2025-02-26 04:15:11,918 | INFO     | sizes: {0: 2370264, 1: 2370406, 5: 2370612, 11: 2370668, 5394: 2397130, 5395: 2406085, 5396: 2406269, 5399: 2406439}
[2025-02-26 11:15:24] 2025-02-26 04:15:11,918 | INFO     | --------------------------------------------------
[2025-02-26 11:15:24] 2025-02-26 04:15:11,918 | INFO     | 
[2025-02-26 11:15:24] 2025-02-26 04:15:11,919 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-02-26 11:15:24] 2025-02-26 04:15:11,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,935 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,935 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,937 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 11:15:24] 2025-02-26 04:15:11,937 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,937 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 11:15:24] 2025-02-26 04:15:11,937 | INFO     | job 6531061284 has completed (purged errors)
[2025-02-26 11:15:24] 2025-02-26 04:15:11,937 | INFO     | overall cleanup function is called
[2025-02-26 11:15:24] 2025-02-26 04:15:12,778 | WARNING  | process 2485101 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 11:15:24] 2025-02-26 04:15:12,944 | INFO     | --- collectZombieJob: --- 10, [2485101]
[2025-02-26 11:15:24] 2025-02-26 04:15:12,944 | INFO     | zombie collector waiting for pid 2485101
[2025-02-26 11:15:24] 2025-02-26 04:15:12,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 11:15:24] 2025-02-26 04:15:12,944 | INFO     | collected zombie processes
[2025-02-26 11:15:24] 2025-02-26 04:15:12,944 | INFO     | will attempt to kill all subprocesses of pid=2485101
[2025-02-26 11:15:24] 2025-02-26 04:15:12,968 | INFO     | using path: /var/lib/boinc-client/slots/6/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 11:15:24] 2025-02-26 04:15:12,969 | INFO     | using path: /var/lib/boinc-client/slots/6/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 11:15:24] 2025-02-26 04:15:12,970 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/6/PanDA_Pilot-6531061284/payload.stdout) since it has not been created yet
[2025-02-26 11:15:24] 2025-02-26 04:15:12,970 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-02-26 11:15:24] 2025-02-26 04:15:12,982 | INFO     | sufficient remaining disk space (1731356262400 B)
[2025-02-26 11:15:24] 2025-02-26 04:15:12,982 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-02-26 11:15:24] 2025-02-26 04:15:12,982 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/6/PanDA_Pilot-6531061284/HITS.43401155._000926.pool.root.1 since it does not exist
[2025-02-26 11:15:24] 2025-02-26 04:15:13,000 | INFO     | process IDs to be killed: [2485101] (in reverse order)
[2025-02-26 11:15:24] 2025-02-26 04:15:13,031 | INFO     | number of running child processes to parent process 2485101: 1
[2025-02-26 11:15:24] 2025-02-26 04:15:13,032 | INFO     | maximum number of monitored processes: 6
[2025-02-26 11:15:24] 2025-02-26 04:15:13,032 | INFO     | aborting job monitoring since job object (job id=6531061284) has expired
[2025-02-26 11:15:24] 2025-02-26 04:15:13,053 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 11:15:24] 2025-02-26 04:15:13,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 11:15:24] 2025-02-26 04:15:13,057 | INFO     | did not find any defunct processes belonging to 2485101
[2025-02-26 11:15:24] 2025-02-26 04:15:13,061 | INFO     | did not find any defunct processes belonging to 2485101
[2025-02-26 11:15:24] 2025-02-26 04:15:13,061 | INFO     | ready for new job
[2025-02-26 11:15:24] 2025-02-26 04:15:13,061 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 11:15:24] 2025-02-26 04:15:13,062 | INFO     | **************************************
[2025-02-26 11:15:24] 2025-02-26 04:15:13,062 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 11:15:24] 2025-02-26 04:15:13,062 | INFO     | **************************************
[2025-02-26 11:15:24] 2025-02-26 04:15:13,063 | INFO     | 
[2025-02-26 11:15:24] 2025-02-26 04:15:13,065 | INFO     | architecture information:
[2025-02-26 11:15:24] 2025-02-26 04:15:13,065 | INFO     | executing command: cat /etc/os-release
[2025-02-26 11:15:24] 2025-02-26 04:15:13,072 | INFO     | cat /etc/os-release:
[2025-02-26 11:15:24] NAME="CentOS Linux"
[2025-02-26 11:15:24] VERSION="7 (Core)"
[2025-02-26 11:15:24] ID="centos"
[2025-02-26 11:15:24] ID_LIKE="rhel fedora"
[2025-02-26 11:15:24] VERSION_ID="7"
[2025-02-26 11:15:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 11:15:24] ANSI_COLOR="0;31"
[2025-02-26 11:15:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 11:15:24] HOME_URL="https://www.centos.org/"
[2025-02-26 11:15:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 11:15:24] 
[2025-02-26 11:15:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 11:15:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 11:15:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 11:15:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 11:15:24] 
[2025-02-26 11:15:24] 2025-02-26 04:15:13,072 | INFO     | **************************************
[2025-02-26 11:15:24] 2025-02-26 04:15:13,575 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-02-26 11:15:24] 2025-02-26 04:15:13,586 | INFO     | sufficient remaining disk space (1731356262400 B)
[2025-02-26 11:15:24] 2025-02-26 04:15:13,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 11:15:24] 2025-02-26 04:15:13,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 11:15:24] 2025-02-26 04:15:13,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 11:15:24] 2025-02-26 04:15:13,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 11:15:24] 2025-02-26 04:15:13,587 | INFO     | will abort loop
[2025-02-26 11:15:24] 2025-02-26 04:15:13,645 | INFO     | all data control threads have been joined
[2025-02-26 11:15:24] 2025-02-26 04:15:13,674 | INFO     | PID=2477063 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-26 11:15:24] 2025-02-26 04:15:13,674 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 11:15:24] 2025-02-26 04:15:13,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 11:15:24] 2025-02-26 04:15:13,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 11:15:24] 2025-02-26 04:15:13,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 11:15:24] 2025-02-26 04:15:14,592 | INFO     | [job] retrieve thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:14,592 | INFO     | [job] queue monitor thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:14,592 | INFO     | [job] job monitor thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:14,651 | INFO     | [data] control thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:14,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:14,739 | INFO     | all job control threads have been joined
[2025-02-26 11:15:24] 2025-02-26 04:15:15,021 | INFO     | all payload control threads have been joined
[2025-02-26 11:15:24] 2025-02-26 04:15:15,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 11:15:24] 2025-02-26 04:15:15,236 | INFO     | [payload] failed_post thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:15,286 | INFO     | [data] copytool_in thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:15,290 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:15,292 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:15,718 | INFO     | [data] copytool_out thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:15,744 | INFO     | [job] control thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:15,834 | INFO     | [job] validate thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:15,968 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:16,008 | INFO     | [payload] validate_post thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:16,026 | INFO     | [payload] control thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:19,178 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 11:15:24] 2025-02-26 04:15:19,584 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137106400499520)>', '<ExcThread(monitor, started 137105971873536)>']
[2025-02-26 11:15:24] 2025-02-26 04:15:19,704 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 11:15:24] 2025-02-26 04:15:19,705 | INFO     | [monitor] control thread has ended
[2025-02-26 11:15:24] 2025-02-26 04:15:24,610 | INFO     | all workflow threads have been joined
[2025-02-26 11:15:24] 2025-02-26 04:15:24,610 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 11:15:24] 2025-02-26 04:15:24,610 | INFO     | traces error code: 0
[2025-02-26 11:15:24] 2025-02-26 04:15:24,611 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 11:15:24] 2025-02-26 04:15:24,717 [wrapper] ==== pilot stdout END ====
[2025-02-26 11:15:24] 2025-02-26 04:15:24,719 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 11:15:24] 2025-02-26 04:15:24,721 [wrapper] pilotpid: 2477063
[2025-02-26 11:15:24] 2025-02-26 04:15:24,722 [wrapper] Pilot exit status: 0
[2025-02-26 11:15:24] 2025-02-26 04:15:24,728 [wrapper] pandaids: 6531061284
[2025-02-26 11:15:24] 2025-02-26 04:15:24,766 [wrapper] cleanup supervisor_pilot 2794326 2477064
[2025-02-26 11:15:24] 2025-02-26 04:15:24,768 [wrapper] Test setup, not cleaning
[2025-02-26 11:15:24] 2025-02-26 04:15:24,772 [wrapper] apfmon messages muted
[2025-02-26 11:15:24] 2025-02-26 04:15:24,774 [wrapper] ==== wrapper stdout END ====
[2025-02-26 11:15:24] 2025-02-26 04:15:24,775 [wrapper] ==== wrapper stderr END ====
[2025-02-26 11:15:24]  *** Error codes and diagnostics ***
[2025-02-26 11:15:24]     "exeErrorCode": 0,
[2025-02-26 11:15:24]     "exeErrorDiag": "",
[2025-02-26 11:15:24]     "pilotErrorCode": 0,
[2025-02-26 11:15:24]     "pilotErrorDiag": "",
[2025-02-26 11:15:24]  *** Listing of results directory ***
[2025-02-26 11:15:24] total 429761
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc    491065 Feb 26 05:04 pilot3.tar.gz
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc      5118 Feb 26 05:20 queuedata.json
[2025-02-26 11:15:24] -rwx------ 1 boinc boinc     35865 Feb 26 05:20 runpilot2-wrapper.sh
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc       100 Feb 26 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 11:15:24] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 09:44 run_atlas
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc       105 Feb 26 09:44 job.xml
[2025-02-26 11:15:24] -rw-r--r-- 2 boinc boinc 250794011 Feb 26 09:44 EVNT.43401153._000038.pool.root.1
[2025-02-26 11:15:24] drwxrwx--x 2 boinc boinc         5 Feb 26 09:44 shared
[2025-02-26 11:15:24] -rw-r--r-- 2 boinc boinc    503546 Feb 26 09:44 input.tar.gz
[2025-02-26 11:15:24] -rw-r--r-- 2 boinc boinc     17569 Feb 26 09:44 start_atlas.sh
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc         0 Feb 26 09:44 boinc_lockfile
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc      2534 Feb 26 09:44 pandaJob.out
[2025-02-26 11:15:24] -rw------- 1 boinc boinc       459 Feb 26 09:44 setup.sh.local
[2025-02-26 11:15:24] -rw------- 1 boinc boinc    987482 Feb 26 09:44 agis_schedconf.cvmfs.json
[2025-02-26 11:15:24] -rw------- 1 boinc boinc   1573632 Feb 26 09:44 agis_ddmendpoints.agis.ALL.json
[2025-02-26 11:15:24] drwx------ 4 boinc boinc        20 Feb 26 09:44 pilot3
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc      6814 Feb 26 10:36 init_data.xml
[2025-02-26 11:15:24] -rw------- 1 boinc boinc        95 Feb 26 11:14 pilot_heartbeat.json
[2025-02-26 11:15:24] -rw------- 1 boinc boinc 186973138 Feb 26 11:14 HITS.43401155._000926.pool.root.1
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc       529 Feb 26 11:14 boinc_task_state.xml
[2025-02-26 11:15:24] -rw------- 1 boinc boinc      1043 Feb 26 11:15 memory_monitor_summary.json
[2025-02-26 11:15:24] -rw------- 1 boinc boinc    359097 Feb 26 11:15 log.43401155._000926.job.log.tgz.1
[2025-02-26 11:15:24] -rw------- 1 boinc boinc      7696 Feb 26 11:15 heartbeat.json
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc      8192 Feb 26 11:15 boinc_mmap_file
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc        27 Feb 26 11:15 wrapper_checkpoint.txt
[2025-02-26 11:15:24] -rw------- 1 boinc boinc      4545 Feb 26 11:15 pilotlog.txt
[2025-02-26 11:15:24] -rw------- 1 boinc boinc    530883 Feb 26 11:15 log.43401155._000926.job.log.1
[2025-02-26 11:15:24] -rw------- 1 boinc boinc       357 Feb 26 11:15 output.list
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc       620 Feb 26 11:15 runtime_log
[2025-02-26 11:15:24] -rw------- 1 boinc boinc    911360 Feb 26 11:15 result.tar.gz
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc     11454 Feb 26 11:15 runtime_log.err
[2025-02-26 11:15:24] -rw------- 1 boinc boinc       648 Feb 26 11:15 GqJKDmTTI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHCxKDmBnAE0n.diag
[2025-02-26 11:15:24] -rw-r--r-- 1 boinc boinc     21825 Feb 26 11:15 stderr.txt
[2025-02-26 11:15:24] HITS file was successfully produced:
[2025-02-26 11:15:24] -rw------- 1 boinc boinc 186973138 Feb 26 11:14 shared/HITS.pool.root.1
[2025-02-26 11:15:24]  *** Contents of shared directory: ***
[2025-02-26 11:15:24] total 428331
[2025-02-26 11:15:24] -rw-r--r-- 2 boinc boinc 250794011 Feb 26 09:44 ATLAS.root_0
[2025-02-26 11:15:24] -rw-r--r-- 2 boinc boinc    503546 Feb 26 09:44 input.tar.gz
[2025-02-26 11:15:24] -rw-r--r-- 2 boinc boinc     17569 Feb 26 09:44 start_atlas.sh
[2025-02-26 11:15:24] -rw------- 1 boinc boinc 186973138 Feb 26 11:14 HITS.pool.root.1
[2025-02-26 11:15:24] -rw------- 1 boinc boinc    911360 Feb 26 11:15 result.tar.gz
11:15:26 (2472840): run_atlas exited; CPU time 50585.641128
11:15:26 (2472840): called boinc_finish(0)

</stderr_txt>
]]>

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