Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:44:37 (2650724): wrapper (7.7.26015): starting
22:44:37 (2650724): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 22:44:37] Arguments: --nthreads 9
[2025-02-25 22:44:37] Threads: 9
[2025-02-25 22:44:37] Checking for CVMFS
[2025-02-25 22:44:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 22:44:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 22:44:37] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 22:44:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 22:44:37] 2.11.5.0 2844332 137401 295936 143061 0 242 10602376 37641216 20199 130560 0 357171 95.992 3269799 39142 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 22:44:37] CVMFS is ok
[2025-02-25 22:44:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 22:44:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 22:44:37] Further information can be found at the LHC@home message board.
[2025-02-25 22:44:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 22:44:37] Checking for apptainer binary...
[2025-02-25 22:44:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 22:44:37] Running /usr/bin/apptainer --version
[2025-02-25 22:44:37] apptainer version 1.3.6-1.el9
[2025-02-25 22:44:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 22:44:37] c6-6-39-4.aglt2.org
[2025-02-25 22:44:37] apptainer works
[2025-02-25 22:44:37] Set ATHENA_PROC_NUMBER=9
[2025-02-25 22:44:37] Set ATHENA_CORE_NUMBER=9
[2025-02-25 22:44:37] Starting ATLAS job with PandaID=6531137065
[2025-02-25 22:44:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 23:54:04]  *** The last 200 lines of the pilot log: ***
[2025-02-25 23:54:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 23:54:04]  replicas=None
[2025-02-25 23:54:04]  scope=mc23_13p6TeV
[2025-02-25 23:54:04]  status=None
[2025-02-25 23:54:04]  status_code=0
[2025-02-25 23:54:04]  storage_token=
[2025-02-25 23:54:04]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6531137065/log.43401163._002112.job.log.tgz.1
[2025-02-25 23:54:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/4b/log.43401163._002112.job.log.tgz.1
[2025-02-25 23:54:04]  workdir=None
[2025-02-25 23:54:04] ]
[2025-02-25 23:54:04] 2025-02-26 04:53:36,322 | INFO     | transferring file log.43401163._002112.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6531137065/log.43401163._002112.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 23:54:04] 2025-02-26 04:53:36,322 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6531137065/log.43401163._002112.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401163._002112.job
[2025-02-25 23:54:04] 2025-02-26 04:53:36,335 | INFO     | adding to output.list: log.43401163._002112.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/4b/log.43401163._002112.job.log.tg
[2025-02-25 23:54:04] 2025-02-26 04:53:36,336 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 23:54:04] 2025-02-26 04:53:36,336 | INFO     | summary of transferred files:
[2025-02-25 23:54:04] 2025-02-26 04:53:36,336 | INFO     |  -- lfn=log.43401163._002112.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 23:54:04] 2025-02-26 04:53:36,336 | INFO     | stage-out finished correctly
[2025-02-25 23:54:04] 2025-02-26 04:53:39,110 | WARNING  | process 2663613 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 23:54:04] 2025-02-26 04:53:39,110 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6531137065/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:54:04] 2025-02-26 04:53:39,261 | INFO     | number of running child processes to parent process 2663613: 1
[2025-02-25 23:54:04] 2025-02-26 04:53:39,261 | INFO     | maximum number of monitored processes: 6
[2025-02-25 23:54:04] 2025-02-26 04:53:39,421 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 23:54:04] 2025-02-26 04:53:39,823 | INFO     | job 6531137065 has state=finished
[2025-02-25 23:54:04] 2025-02-26 04:53:39,824 | INFO     | preparing for final server update for job 6531137065 in state='finished'
[2025-02-25 23:54:04] 2025-02-26 04:53:39,888 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 23:54:04] 2025-02-26 04:53:39,889 | INFO     | this job has now completed (state=finished)
[2025-02-25 23:54:04] 2025-02-26 04:53:39,889 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 23:54:04] 2025-02-26 04:53:39,889 | INFO     | log transfer has been attempted: DONE
[2025-02-25 23:54:04] 2025-02-26 04:53:39,889 | INFO     | job 6531137065 has finished - writing final server update
[2025-02-25 23:54:04] 2025-02-26 04:53:39,890 | INFO     | total number of processed events: 400 (read)
[2025-02-25 23:54:04] 2025-02-26 04:53:39,906 | INFO     | executing command: lscpu
[2025-02-25 23:54:04] 2025-02-26 04:53:39,957 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 23:54:04] 2025-02-26 04:53:39,996 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 23:54:04] 2025-02-26 04:53:40,998 | INFO     | PID=2654779 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 23:54:04] 2025-02-26 04:53:40,998 | INFO     | .. there are 27 such processes running
[2025-02-25 23:54:04] 2025-02-26 04:53:41,764 | INFO     | monitor loop #309: job 0:6531137065 is in state 'finished'
[2025-02-25 23:54:04] 2025-02-26 04:53:41,765 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 23:54:04] 2025-02-26 04:53:44,266 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 23:54:04] 2025-02-26 04:53:44,266 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6531137065/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:54:04] 2025-02-26 04:53:44,267 | INFO     | extracted standard info from prmon json
[2025-02-25 23:54:04] 2025-02-26 04:53:44,267 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 23:54:04] 2025-02-26 04:53:44,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 23:54:04] 2025-02-26 04:53:44,268 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 23:54:04] 2025-02-26 04:53:44,268 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 23:54:04] 2025-02-26 04:53:44,269 | INFO     | fitting pss+swap vs Time
[2025-02-25 23:54:04] 2025-02-26 04:53:44,269 | INFO     | monitor loop #310: job 0:6531137065 is in state 'finished'
[2025-02-25 23:54:04] 2025-02-26 04:53:44,270 | INFO     | model: linear, x: [1740541818.0, 1740541879.0, 1740541940.0, 1740542001.0, 1740542062.0, 1740542123.0, 1740542184.0, 1740542245.0, 1740542306.0, 1740542367.0, 1740
[2025-02-25 23:54:04] 2025-02-26 04:53:44,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 23:54:04] 2025-02-26 04:53:44,270 | INFO     | sum of square deviations: 70364110.0
[2025-02-25 23:54:04] 2025-02-26 04:53:44,270 | INFO     | sum of deviations: 7302460121.0
[2025-02-25 23:54:04] 2025-02-26 04:53:44,270 | INFO     | mean x: 1740543648.0
[2025-02-25 23:54:04] 2025-02-26 04:53:44,271 | INFO     | mean y: 2267759.5409836066
[2025-02-25 23:54:04] 2025-02-26 04:53:44,271 | INFO     | -- intersect: -180633152462.21497
[2025-02-25 23:54:04] 2025-02-26 04:53:44,271 | INFO     | intersect: -180633152462.21497
[2025-02-25 23:54:04] 2025-02-26 04:53:44,271 | INFO     | chi2: 1.818224268595482
[2025-02-25 23:54:04] 2025-02-26 04:53:44,271 | INFO     | -- intersect: -180633152462.21497
[2025-02-25 23:54:04] 2025-02-26 04:53:44,271 | INFO     | current memory leak: 103.78 B/s (using 61 data points, chi2=1.82)
[2025-02-25 23:54:04] 2025-02-26 04:53:44,271 | INFO     | ..............................
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | . Timing measurements:
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | . get job = 0 s
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | . initial setup = 2 s
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | . payload setup = 5 s
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | . stage-in = 0 s
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | . payload execution = 4102 s
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | . stage-out = 0 s
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | . log creation = 0 s
[2025-02-25 23:54:04] 2025-02-26 04:53:44,272 | INFO     | ..............................
[2025-02-25 23:54:04] 2025-02-26 04:53:44,495 | INFO     | 
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | job summary report
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | --------------------------------------------------
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | PanDA job id: 6531137065
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | task id: 43401163
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | errors: (none)
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | pilot state: finished 
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | transexitcode: 0
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | exeerrorcode: 0
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | exeerrordiag: 
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | exitcode: 0
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | exitmsg: OK
[2025-02-25 23:54:04] 2025-02-26 04:53:44,496 | INFO     | cpuconsumptiontime: 29476 s
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | nevents: 400
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | neventsw: 0
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | pid: 2663613
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | pgrp: 2663613
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | corecount: 9
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | event service: False
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | sizes: {0: 2370212, 1: 2370411, 5: 2370617, 12: 2370673, 4112: 2396547, 4113: 2405488, 4117: 2405672, 4121: 2405842}
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | --------------------------------------------------
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | 
[2025-02-25 23:54:04] 2025-02-26 04:53:44,497 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 23:54:04] 2025-02-26 04:53:44,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 23:54:04] 2025-02-26 04:53:44,522 | INFO     | job 6531137065 has completed (purged errors)
[2025-02-25 23:54:04] 2025-02-26 04:53:44,522 | INFO     | overall cleanup function is called
[2025-02-25 23:54:04] 2025-02-26 04:53:45,529 | INFO     | --- collectZombieJob: --- 10, [2663613]
[2025-02-25 23:54:04] 2025-02-26 04:53:45,530 | INFO     | zombie collector waiting for pid 2663613
[2025-02-25 23:54:04] 2025-02-26 04:53:45,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 23:54:04] 2025-02-26 04:53:45,530 | INFO     | collected zombie processes
[2025-02-25 23:54:04] 2025-02-26 04:53:45,530 | INFO     | will attempt to kill all subprocesses of pid=2663613
[2025-02-25 23:54:04] 2025-02-26 04:53:45,698 | INFO     | process IDs to be killed: [2663613] (in reverse order)
[2025-02-25 23:54:04] 2025-02-26 04:53:45,785 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 23:54:04] 2025-02-26 04:53:45,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 23:54:04] 2025-02-26 04:53:45,798 | INFO     | did not find any defunct processes belonging to 2663613
[2025-02-25 23:54:04] 2025-02-26 04:53:45,811 | INFO     | did not find any defunct processes belonging to 2663613
[2025-02-25 23:54:04] 2025-02-26 04:53:45,812 | INFO     | ready for new job
[2025-02-25 23:54:04] 2025-02-26 04:53:45,812 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 23:54:04] 2025-02-26 04:53:45,813 | INFO     | **************************************
[2025-02-25 23:54:04] 2025-02-26 04:53:45,813 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 23:54:04] 2025-02-26 04:53:45,813 | INFO     | **************************************
[2025-02-25 23:54:04] 2025-02-26 04:53:45,814 | INFO     | 
[2025-02-25 23:54:04] 2025-02-26 04:53:45,828 | INFO     | architecture information:
[2025-02-25 23:54:04] 2025-02-26 04:53:45,828 | INFO     | executing command: cat /etc/os-release
[2025-02-25 23:54:04] 2025-02-26 04:53:45,848 | INFO     | cat /etc/os-release:
[2025-02-25 23:54:04] NAME="CentOS Linux"
[2025-02-25 23:54:04] VERSION="7 (Core)"
[2025-02-25 23:54:04] ID="centos"
[2025-02-25 23:54:04] ID_LIKE="rhel fedora"
[2025-02-25 23:54:04] VERSION_ID="7"
[2025-02-25 23:54:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 23:54:04] ANSI_COLOR="0;31"
[2025-02-25 23:54:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 23:54:04] HOME_URL="https://www.centos.org/"
[2025-02-25 23:54:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 23:54:04] 
[2025-02-25 23:54:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 23:54:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 23:54:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 23:54:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 23:54:04] 
[2025-02-25 23:54:04] 2025-02-26 04:53:45,848 | INFO     | **************************************
[2025-02-25 23:54:04] 2025-02-26 04:53:46,351 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 23:54:04] 2025-02-26 04:53:46,373 | INFO     | sufficient remaining disk space (75728158720 B)
[2025-02-25 23:54:04] 2025-02-26 04:53:46,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 23:54:04] 2025-02-26 04:53:46,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 23:54:04] 2025-02-26 04:53:46,374 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 23:54:04] 2025-02-26 04:53:46,772 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 23:54:04] 2025-02-26 04:53:46,773 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 23:54:04] 2025-02-26 04:53:46,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:54:04] 2025-02-26 04:53:46,773 | INFO     | will abort loop
[2025-02-25 23:54:04] 2025-02-26 04:53:46,808 | INFO     | all data control threads have been joined
[2025-02-25 23:54:04] 2025-02-26 04:53:46,922 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 23:54:04] 2025-02-26 04:53:46,964 | INFO     | all job control threads have been joined
[2025-02-25 23:54:04] 2025-02-26 04:53:47,014 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 23:54:04] 2025-02-26 04:53:47,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 23:54:04] 2025-02-26 04:53:47,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 23:54:04] 2025-02-26 04:53:47,268 | INFO     | all payload control threads have been joined
[2025-02-25 23:54:04] 2025-02-26 04:53:47,378 | INFO     | [job] retrieve thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:47,574 | INFO     | [payload] failed_post thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:47,777 | INFO     | [job] job monitor thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:47,813 | INFO     | [data] control thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:47,931 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:47,969 | INFO     | [job] control thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:48,274 | INFO     | [payload] control thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:48,410 | INFO     | [job] validate thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:48,690 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:48,728 | INFO     | [data] copytool_in thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:48,785 | INFO     | [payload] validate_post thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:48,845 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:48,927 | INFO     | [data] copytool_out thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:49,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:54:04] 2025-02-26 04:53:50,340 | INFO     | [job] queue monitor thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:50,379 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:57,242 | INFO     | job.realtimelogging is not enabled
[2025-02-25 23:54:04] 2025-02-26 04:53:58,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 23:54:04] 2025-02-26 04:53:59,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313724241728)>', '<ExcThread(monitor, started 140313024788224)>']
[2025-02-25 23:54:04] 2025-02-26 04:54:00,077 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 23:54:04] 2025-02-26 04:54:00,078 | INFO     | [monitor] control thread has ended
[2025-02-25 23:54:04] 2025-02-26 04:54:04,552 | INFO     | all workflow threads have been joined
[2025-02-25 23:54:04] 2025-02-26 04:54:04,553 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 23:54:04] 2025-02-26 04:54:04,553 | INFO     | traces error code: 0
[2025-02-25 23:54:04] 2025-02-26 04:54:04,553 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 23:54:04] 2025-02-26 04:54:04,666 [wrapper] ==== pilot stdout END ====
[2025-02-25 23:54:04] 2025-02-26 04:54:04,669 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 23:54:04] 2025-02-26 04:54:04,671 [wrapper] pilotpid: 2654779
[2025-02-25 23:54:04] 2025-02-26 04:54:04,673 [wrapper] Pilot exit status: 0
[2025-02-25 23:54:04] 2025-02-26 04:54:04,684 [wrapper] pandaids: 6531137065
[2025-02-25 23:54:04] 2025-02-26 04:54:04,753 [wrapper] cleanup supervisor_pilot 2927467 2654780
[2025-02-25 23:54:04] 2025-02-26 04:54:04,758 [wrapper] Test setup, not cleaning
[2025-02-25 23:54:04] 2025-02-26 04:54:04,765 [wrapper] apfmon messages muted
[2025-02-25 23:54:04] 2025-02-26 04:54:04,769 [wrapper] ==== wrapper stdout END ====
[2025-02-25 23:54:04] 2025-02-26 04:54:04,772 [wrapper] ==== wrapper stderr END ====
[2025-02-25 23:54:04]  *** Error codes and diagnostics ***
[2025-02-25 23:54:04]     "exeErrorCode": 0,
[2025-02-25 23:54:04]     "exeErrorDiag": "",
[2025-02-25 23:54:04]     "pilotErrorCode": 0,
[2025-02-25 23:54:04]     "pilotErrorDiag": "",
[2025-02-25 23:54:04]  *** Listing of results directory ***
[2025-02-25 23:54:04] total 431148
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 18:33 queuedata.json
[2025-02-25 23:54:04] -rwx------. 1 boincer umatlas     35865 Feb 25 18:33 runpilot2-wrapper.sh
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 18:33 pilot3.tar.gz
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas       100 Feb 25 22:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 23:54:04] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 22:44 run_atlas
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas       105 Feb 25 22:44 job.xml
[2025-02-25 23:54:04] -rw-r--r--. 2 boincer umatlas 249890837 Feb 25 22:44 EVNT.43401161._000083.pool.root.1
[2025-02-25 23:54:04] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 22:44 start_atlas.sh
[2025-02-25 23:54:04] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 22:44 shared
[2025-02-25 23:54:04] -rw-r--r--. 2 boincer umatlas    503556 Feb 25 22:44 input.tar.gz
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas         0 Feb 25 22:44 boinc_lockfile
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas      2541 Feb 25 22:44 pandaJob.out
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas       467 Feb 25 22:44 setup.sh.local
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas    987482 Feb 25 22:44 agis_schedconf.cvmfs.json
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas   1573632 Feb 25 22:44 agis_ddmendpoints.agis.ALL.json
[2025-02-25 23:54:04] drwx------. 4 boincer umatlas      4096 Feb 25 22:44 pilot3
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas      6840 Feb 25 23:47 init_data.xml
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas 186332086 Feb 25 23:53 HITS.43401163._002112.pool.root.1
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas        95 Feb 25 23:53 pilot_heartbeat.json
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas       529 Feb 25 23:53 boinc_task_state.xml
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas      1042 Feb 25 23:53 memory_monitor_summary.json
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas    318512 Feb 25 23:53 log.43401163._002112.job.log.tgz.1
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas      7740 Feb 25 23:53 heartbeat.json
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 23:54 boinc_mmap_file
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas        27 Feb 25 23:54 wrapper_checkpoint.txt
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas      4473 Feb 25 23:54 pilotlog.txt
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas    418788 Feb 25 23:54 log.43401163._002112.job.log.1
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas       357 Feb 25 23:54 output.list
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas       620 Feb 25 23:54 runtime_log
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas    757760 Feb 25 23:54 result.tar.gz
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas       651 Feb 25 23:54 ZzXMDmlbJ76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm1igKDmKL6bQm.diag
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 23:54 runtime_log.err
[2025-02-25 23:54:04] -rw-r--r--. 1 boincer umatlas     22024 Feb 25 23:54 stderr.txt
[2025-02-25 23:54:04] HITS file was successfully produced:
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas 186332086 Feb 25 23:53 shared/HITS.pool.root.1
[2025-02-25 23:54:04]  *** Contents of shared directory: ***
[2025-02-25 23:54:04] total 427260
[2025-02-25 23:54:04] -rw-r--r--. 2 boincer umatlas 249890837 Feb 25 22:44 ATLAS.root_0
[2025-02-25 23:54:04] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 22:44 start_atlas.sh
[2025-02-25 23:54:04] -rw-r--r--. 2 boincer umatlas    503556 Feb 25 22:44 input.tar.gz
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas 186332086 Feb 25 23:53 HITS.pool.root.1
[2025-02-25 23:54:04] -rw-------. 1 boincer umatlas    757760 Feb 25 23:54 result.tar.gz
23:54:06 (2650724): run_atlas exited; CPU time 29426.098216
23:54:06 (2650724): called boinc_finish(0)

</stderr_txt>
]]>

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