Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:28:25 (1119785): wrapper (7.7.26015): starting
23:28:25 (1119785): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 23:28:25] Arguments: --nthreads 9
[2025-02-25 23:28:25] Threads: 9
[2025-02-25 23:28:25] Checking for CVMFS
[2025-02-25 23:28:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 23:28:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 23:28:25] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 23:28:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 23:28:26] 2.11.5.0 3813485 17002 262508 143063 1 101 26225601 37641217 15636 130560 0 1128861 99.511 1481195 32244 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 23:28:26] CVMFS is ok
[2025-02-25 23:28:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 23:28:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 23:28:26] Further information can be found at the LHC@home message board.
[2025-02-25 23:28:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 23:28:26] Checking for apptainer binary...
[2025-02-25 23:28:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 23:28:26] Running /usr/bin/apptainer --version
[2025-02-25 23:28:26] apptainer version 1.3.6-1.el9
[2025-02-25 23:28:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 23:28:26] c6-1-26-4.aglt2.org
[2025-02-25 23:28:26] apptainer works
[2025-02-25 23:28:26] Set ATHENA_PROC_NUMBER=9
[2025-02-25 23:28:26] Set ATHENA_CORE_NUMBER=9
[2025-02-25 23:28:26] Starting ATLAS job with PandaID=6531136642
[2025-02-25 23:28:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 01:07:29]  *** The last 200 lines of the pilot log: ***
[2025-02-26 01:07:29]  lfn=log.43401163._001990.job.log.tgz.1
[2025-02-26 01:07:29]  mtime=0
[2025-02-26 01:07:29]  protocol_id=None
[2025-02-26 01:07:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 01:07:29]  replicas=None
[2025-02-26 01:07:29]  scope=mc23_13p6TeV
[2025-02-26 01:07:29]  status=None
[2025-02-26 01:07:29]  status_code=0
[2025-02-26 01:07:29]  storage_token=
[2025-02-26 01:07:29]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6531136642/log.43401163._001990.job.log.tgz.1
[2025-02-26 01:07:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/47/log.43401163._001990.job.log.tgz.1
[2025-02-26 01:07:29]  workdir=None
[2025-02-26 01:07:29] ]
[2025-02-26 01:07:29] 2025-02-26 06:07:04,154 | INFO     | transferring file log.43401163._001990.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6531136642/log.43401163._001990.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-26 01:07:29] 2025-02-26 06:07:04,154 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6531136642/log.43401163._001990.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401163._001990.job
[2025-02-26 01:07:29] 2025-02-26 06:07:04,234 | INFO     | adding to output.list: log.43401163._001990.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/47/log.43401163._001990.job.log.tg
[2025-02-26 01:07:29] 2025-02-26 06:07:04,258 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 01:07:29] 2025-02-26 06:07:04,259 | INFO     | summary of transferred files:
[2025-02-26 01:07:29] 2025-02-26 06:07:04,259 | INFO     |  -- lfn=log.43401163._001990.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 01:07:29] 2025-02-26 06:07:04,259 | INFO     | stage-out finished correctly
[2025-02-26 01:07:29] 2025-02-26 06:07:06,582 | INFO     | monitor loop #437: job 0:6531136642 is in state 'finished'
[2025-02-26 01:07:29] 2025-02-26 06:07:06,583 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 01:07:29] 2025-02-26 06:07:07,087 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 01:07:29] 2025-02-26 06:07:07,203 | INFO     | job 6531136642 has state=finished
[2025-02-26 01:07:29] 2025-02-26 06:07:07,203 | INFO     | preparing for final server update for job 6531136642 in state='finished'
[2025-02-26 01:07:29] 2025-02-26 06:07:07,204 | INFO     | this job has now completed (state=finished)
[2025-02-26 01:07:29] 2025-02-26 06:07:07,204 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 01:07:29] 2025-02-26 06:07:07,204 | INFO     | log transfer has been attempted: DONE
[2025-02-26 01:07:29] 2025-02-26 06:07:07,204 | INFO     | job 6531136642 has finished - writing final server update
[2025-02-26 01:07:29] 2025-02-26 06:07:07,205 | INFO     | total number of processed events: 400 (read)
[2025-02-26 01:07:29] 2025-02-26 06:07:07,223 | INFO     | executing command: lscpu
[2025-02-26 01:07:29] 2025-02-26 06:07:07,289 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-26 01:07:29] 2025-02-26 06:07:07,310 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 01:07:29] 2025-02-26 06:07:09,087 | INFO     | monitor loop #438: job 0:6531136642 is in state 'finished'
[2025-02-26 01:07:29] 2025-02-26 06:07:09,087 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 01:07:29] 2025-02-26 06:07:11,373 | INFO     | PID=1125003 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-26 01:07:29] 2025-02-26 06:07:11,374 | INFO     | .. there are 16 such processes running
[2025-02-26 01:07:29] 2025-02-26 06:07:11,599 | INFO     | monitor loop #439: job 0:6531136642 is in state 'finished'
[2025-02-26 01:07:29] 2025-02-26 06:07:11,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 01:07:29] 2025-02-26 06:07:14,104 | INFO     | monitor loop #440: job 0:6531136642 is in state 'finished'
[2025-02-26 01:07:29] 2025-02-26 06:07:14,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 01:07:29] 2025-02-26 06:07:15,794 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-26 01:07:29] 2025-02-26 06:07:15,794 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6531136642/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 01:07:29] 2025-02-26 06:07:15,795 | INFO     | extracted standard info from prmon json
[2025-02-26 01:07:29] 2025-02-26 06:07:15,795 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 01:07:29] 2025-02-26 06:07:15,796 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 01:07:29] 2025-02-26 06:07:15,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 01:07:29] 2025-02-26 06:07:15,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 01:07:29] 2025-02-26 06:07:15,798 | INFO     | fitting pss+swap vs Time
[2025-02-26 01:07:29] 2025-02-26 06:07:15,798 | INFO     | model: linear, x: [1740544474.0, 1740544535.0, 1740544596.0, 1740544657.0, 1740544718.0, 1740544779.0, 1740544840.0, 1740544901.0, 1740544962.0, 1740545023.0, 1740
[2025-02-26 01:07:29] 2025-02-26 06:07:15,799 | INFO     | sum of square deviations: 218571540.0
[2025-02-26 01:07:29] 2025-02-26 06:07:15,799 | INFO     | sum of deviations: 10628993007.000002
[2025-02-26 01:07:29] 2025-02-26 06:07:15,799 | INFO     | mean x: 1740547158.0
[2025-02-26 01:07:29] 2025-02-26 06:07:15,799 | INFO     | mean y: 2295274.606741573
[2025-02-26 01:07:29] 2025-02-26 06:07:15,799 | INFO     | -- intersect: -84639390329.73007
[2025-02-26 01:07:29] 2025-02-26 06:07:15,799 | INFO     | intersect: -84639390329.73007
[2025-02-26 01:07:29] 2025-02-26 06:07:15,800 | INFO     | chi2: 2.2289602431440394
[2025-02-26 01:07:29] 2025-02-26 06:07:15,800 | INFO     | -- intersect: -84639390329.73007
[2025-02-26 01:07:29] 2025-02-26 06:07:15,800 | INFO     | current memory leak: 48.63 B/s (using 89 data points, chi2=2.23)
[2025-02-26 01:07:29] 2025-02-26 06:07:15,800 | INFO     | ..............................
[2025-02-26 01:07:29] 2025-02-26 06:07:15,800 | INFO     | . Timing measurements:
[2025-02-26 01:07:29] 2025-02-26 06:07:15,800 | INFO     | . get job = 0 s
[2025-02-26 01:07:29] 2025-02-26 06:07:15,801 | INFO     | . initial setup = 3 s
[2025-02-26 01:07:29] 2025-02-26 06:07:15,801 | INFO     | . payload setup = 9 s
[2025-02-26 01:07:29] 2025-02-26 06:07:15,801 | INFO     | . stage-in = 0 s
[2025-02-26 01:07:29] 2025-02-26 06:07:15,801 | INFO     | . payload execution = 5860 s
[2025-02-26 01:07:29] 2025-02-26 06:07:15,801 | INFO     | . stage-out = 0 s
[2025-02-26 01:07:29] 2025-02-26 06:07:15,801 | INFO     | . log creation = 0 s
[2025-02-26 01:07:29] 2025-02-26 06:07:15,801 | INFO     | ..............................
[2025-02-26 01:07:29] 2025-02-26 06:07:15,891 | INFO     | 
[2025-02-26 01:07:29] 2025-02-26 06:07:15,891 | INFO     | job summary report
[2025-02-26 01:07:29] 2025-02-26 06:07:15,891 | INFO     | --------------------------------------------------
[2025-02-26 01:07:29] 2025-02-26 06:07:15,891 | INFO     | PanDA job id: 6531136642
[2025-02-26 01:07:29] 2025-02-26 06:07:15,891 | INFO     | task id: 43401163
[2025-02-26 01:07:29] 2025-02-26 06:07:15,891 | INFO     | errors: (none)
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | pilot state: finished 
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | transexitcode: 0
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | exeerrorcode: 0
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | exeerrordiag: 
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | exitcode: 0
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | exitmsg: OK
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | cpuconsumptiontime: 38337 s
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | nevents: 400
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | neventsw: 0
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | pid: 1135155
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | pgrp: 1135155
[2025-02-26 01:07:29] 2025-02-26 06:07:15,892 | INFO     | corecount: 9
[2025-02-26 01:07:29] 2025-02-26 06:07:15,893 | INFO     | event service: False
[2025-02-26 01:07:29] 2025-02-26 06:07:15,893 | INFO     | sizes: {0: 2370383, 8: 2370589, 11: 2370617, 5874: 2397131, 5876: 2406072, 5879: 2406128, 5888: 2406426}
[2025-02-26 01:07:29] 2025-02-26 06:07:15,893 | INFO     | --------------------------------------------------
[2025-02-26 01:07:29] 2025-02-26 06:07:15,893 | INFO     | 
[2025-02-26 01:07:29] 2025-02-26 06:07:15,893 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-26 01:07:29] 2025-02-26 06:07:15,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 01:07:29] 2025-02-26 06:07:15,917 | INFO     | job 6531136642 has completed (purged errors)
[2025-02-26 01:07:29] 2025-02-26 06:07:15,918 | INFO     | overall cleanup function is called
[2025-02-26 01:07:29] 2025-02-26 06:07:16,928 | INFO     | --- collectZombieJob: --- 10, [1135155]
[2025-02-26 01:07:29] 2025-02-26 06:07:16,928 | INFO     | zombie collector waiting for pid 1135155
[2025-02-26 01:07:29] 2025-02-26 06:07:16,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 01:07:29] 2025-02-26 06:07:16,928 | INFO     | collected zombie processes
[2025-02-26 01:07:29] 2025-02-26 06:07:16,928 | INFO     | will attempt to kill all subprocesses of pid=1135155
[2025-02-26 01:07:29] 2025-02-26 06:07:17,131 | INFO     | process IDs to be killed: [1135155] (in reverse order)
[2025-02-26 01:07:29] 2025-02-26 06:07:17,236 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 01:07:29] 2025-02-26 06:07:17,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 01:07:29] 2025-02-26 06:07:17,279 | INFO     | did not find any defunct processes belonging to 1135155
[2025-02-26 01:07:29] 2025-02-26 06:07:17,291 | INFO     | did not find any defunct processes belonging to 1135155
[2025-02-26 01:07:29] 2025-02-26 06:07:17,292 | INFO     | ready for new job
[2025-02-26 01:07:29] 2025-02-26 06:07:17,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 01:07:29] 2025-02-26 06:07:17,294 | INFO     | **************************************
[2025-02-26 01:07:29] 2025-02-26 06:07:17,295 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 01:07:29] 2025-02-26 06:07:17,295 | INFO     | **************************************
[2025-02-26 01:07:29] 2025-02-26 06:07:17,295 | INFO     | 
[2025-02-26 01:07:29] 2025-02-26 06:07:17,311 | INFO     | architecture information:
[2025-02-26 01:07:29] 2025-02-26 06:07:17,311 | INFO     | executing command: cat /etc/os-release
[2025-02-26 01:07:29] 2025-02-26 06:07:17,339 | INFO     | cat /etc/os-release:
[2025-02-26 01:07:29] NAME="CentOS Linux"
[2025-02-26 01:07:29] VERSION="7 (Core)"
[2025-02-26 01:07:29] ID="centos"
[2025-02-26 01:07:29] ID_LIKE="rhel fedora"
[2025-02-26 01:07:29] VERSION_ID="7"
[2025-02-26 01:07:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 01:07:29] ANSI_COLOR="0;31"
[2025-02-26 01:07:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 01:07:29] HOME_URL="https://www.centos.org/"
[2025-02-26 01:07:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 01:07:29] 
[2025-02-26 01:07:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 01:07:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 01:07:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 01:07:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 01:07:29] 
[2025-02-26 01:07:29] 2025-02-26 06:07:17,339 | INFO     | **************************************
[2025-02-26 01:07:29] 2025-02-26 06:07:17,843 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-26 01:07:29] 2025-02-26 06:07:17,866 | INFO     | sufficient remaining disk space (63751323648 B)
[2025-02-26 01:07:29] 2025-02-26 06:07:17,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 01:07:29] 2025-02-26 06:07:17,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 01:07:29] 2025-02-26 06:07:17,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 01:07:29] 2025-02-26 06:07:17,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 01:07:29] 2025-02-26 06:07:17,868 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 01:07:29] 2025-02-26 06:07:17,868 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 01:07:29] 2025-02-26 06:07:17,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 01:07:29] 2025-02-26 06:07:17,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 01:07:29] 2025-02-26 06:07:17,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 01:07:29] 2025-02-26 06:07:17,868 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 01:07:29] 2025-02-26 06:07:17,868 | INFO     | aborting loop
[2025-02-26 01:07:29] 2025-02-26 06:07:17,883 | INFO     | all job control threads have been joined
[2025-02-26 01:07:29] 2025-02-26 06:07:18,238 | INFO     | all data control threads have been joined
[2025-02-26 01:07:29] 2025-02-26 06:07:18,874 | INFO     | [job] retrieve thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:18,875 | INFO     | [job] queue monitor thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:18,875 | INFO     | [job] job monitor thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:18,888 | INFO     | [job] control thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:18,925 | INFO     | [data] copytool_in thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:19,066 | INFO     | all payload control threads have been joined
[2025-02-26 01:07:29] 2025-02-26 06:07:19,085 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:19,244 | INFO     | [data] control thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:19,246 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:19,329 | INFO     | [payload] validate_post thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:19,437 | INFO     | [payload] failed_post thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:19,756 | INFO     | [job] validate thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:19,874 | INFO     | [data] copytool_out thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:19,906 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:20,067 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:20,071 | INFO     | [payload] control thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:21,890 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 01:07:29] 2025-02-26 06:07:23,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328818161472)>', '<ExcThread(monitor, started 140328541587200)>']
[2025-02-26 01:07:29] 2025-02-26 06:07:23,903 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 01:07:29] 2025-02-26 06:07:23,903 | INFO     | [monitor] control thread has ended
[2025-02-26 01:07:29] 2025-02-26 06:07:28,520 | INFO     | all workflow threads have been joined
[2025-02-26 01:07:29] 2025-02-26 06:07:28,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 01:07:29] 2025-02-26 06:07:28,521 | INFO     | traces error code: 0
[2025-02-26 01:07:29] 2025-02-26 06:07:28,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 01:07:29] 2025-02-26 06:07:28,681 [wrapper] ==== pilot stdout END ====
[2025-02-26 01:07:29] 2025-02-26 06:07:28,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 01:07:29] 2025-02-26 06:07:28,700 [wrapper] pilotpid: 1125003
[2025-02-26 01:07:29] 2025-02-26 06:07:28,703 [wrapper] Pilot exit status: 0
[2025-02-26 01:07:29] 2025-02-26 06:07:28,721 [wrapper] pandaids: 6531136642
[2025-02-26 01:07:29] 2025-02-26 06:07:28,800 [wrapper] cleanup supervisor_pilot 1933602 1125004
[2025-02-26 01:07:29] 2025-02-26 06:07:28,825 [wrapper] Test setup, not cleaning
[2025-02-26 01:07:29] 2025-02-26 06:07:28,831 [wrapper] apfmon messages muted
[2025-02-26 01:07:29] 2025-02-26 06:07:28,840 [wrapper] ==== wrapper stdout END ====
[2025-02-26 01:07:29] 2025-02-26 06:07:28,842 [wrapper] ==== wrapper stderr END ====
[2025-02-26 01:07:29]  *** Error codes and diagnostics ***
[2025-02-26 01:07:29]     "exeErrorCode": 0,
[2025-02-26 01:07:29]     "exeErrorDiag": "",
[2025-02-26 01:07:29]     "pilotErrorCode": 0,
[2025-02-26 01:07:29]     "pilotErrorDiag": "",
[2025-02-26 01:07:29]  *** Listing of results directory ***
[2025-02-26 01:07:29] total 429696
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 18:30 pilot3.tar.gz
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 18:33 queuedata.json
[2025-02-26 01:07:29] -rwx------. 1 boincer umatlas     35865 Feb 25 18:33 runpilot2-wrapper.sh
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas       100 Feb 25 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 01:07:29] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 23:28 run_atlas
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas       105 Feb 25 23:28 job.xml
[2025-02-26 01:07:29] -rw-r--r--. 2 boincer umatlas 249498098 Feb 25 23:28 EVNT.43401161._000078.pool.root.1
[2025-02-26 01:07:29] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 23:28 start_atlas.sh
[2025-02-26 01:07:29] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 23:28 shared
[2025-02-26 01:07:29] -rw-r--r--. 2 boincer umatlas    503550 Feb 25 23:28 input.tar.gz
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas         0 Feb 25 23:28 boinc_lockfile
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas      2541 Feb 25 23:28 pandaJob.out
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas       467 Feb 25 23:28 setup.sh.local
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas    987490 Feb 25 23:28 agis_schedconf.cvmfs.json
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas   1573632 Feb 25 23:28 agis_ddmendpoints.agis.ALL.json
[2025-02-26 01:07:29] drwx------. 4 boincer umatlas      4096 Feb 25 23:28 pilot3
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas      6841 Feb 26 01:02 init_data.xml
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas 184886009 Feb 26 01:06 HITS.43401163._001990.pool.root.1
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas       529 Feb 26 01:06 boinc_task_state.xml
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas        95 Feb 26 01:06 pilot_heartbeat.json
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas      1041 Feb 26 01:06 memory_monitor_summary.json
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas    343375 Feb 26 01:07 log.43401163._001990.job.log.tgz.1
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas      7733 Feb 26 01:07 heartbeat.json
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas      8192 Feb 26 01:07 boinc_mmap_file
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas        27 Feb 26 01:07 wrapper_checkpoint.txt
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas      4338 Feb 26 01:07 pilotlog.txt
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas    571758 Feb 26 01:07 log.43401163._001990.job.log.1
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas       357 Feb 26 01:07 output.list
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas       620 Feb 26 01:07 runtime_log
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas    931840 Feb 26 01:07 result.tar.gz
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas     11423 Feb 26 01:07 runtime_log.err
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas       653 Feb 26 01:07 avMNDmjbJ76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm9ggKDmng4fnm.diag
[2025-02-26 01:07:29] -rw-r--r--. 1 boincer umatlas     21842 Feb 26 01:07 stderr.txt
[2025-02-26 01:07:29] HITS file was successfully produced:
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas 184886009 Feb 26 01:06 shared/HITS.pool.root.1
[2025-02-26 01:07:29]  *** Contents of shared directory: ***
[2025-02-26 01:07:29] total 425636
[2025-02-26 01:07:29] -rw-r--r--. 2 boincer umatlas 249498098 Feb 25 23:28 ATLAS.root_0
[2025-02-26 01:07:29] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 23:28 start_atlas.sh
[2025-02-26 01:07:29] -rw-r--r--. 2 boincer umatlas    503550 Feb 25 23:28 input.tar.gz
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas 184886009 Feb 26 01:06 HITS.pool.root.1
[2025-02-26 01:07:29] -rw-------. 1 boincer umatlas    931840 Feb 26 01:07 result.tar.gz
01:07:30 (1119785): run_atlas exited; CPU time 38283.321917
01:07:30 (1119785): called boinc_finish(0)

</stderr_txt>
]]>

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