Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
04:06:24 (2640284): wrapper (7.7.26015): starting
04:06:24 (2640284): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 04:06:24] Arguments: --nthreads 12
[2025-02-26 04:06:24] Threads: 12
[2025-02-26 04:06:24] Checking for CVMFS
[2025-02-26 04:06:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 04:06:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 04:06:24] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 04:06:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 04:06:24] 2.12.6.0 34541 835 52396 143060 0 61 5168281 6291457 921 130560 0 3120841 99.808 766860 1164 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.12.5:3128 1
[2025-02-26 04:06:24] CVMFS is ok
[2025-02-26 04:06:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 04:06:24] Checking for apptainer binary...
[2025-02-26 04:06:24] apptainer is not installed, using version from CVMFS
[2025-02-26 04:06:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 04:06:25] pm108
[2025-02-26 04:06:25] apptainer works
[2025-02-26 04:06:25] Set ATHENA_PROC_NUMBER=12
[2025-02-26 04:06:25] Set ATHENA_CORE_NUMBER=12
[2025-02-26 04:06:25] Starting ATLAS job with PandaID=6531061215
[2025-02-26 04:06:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 04:48:21]  *** The last 200 lines of the pilot log: ***
[2025-02-26 04:48:21]  filetype=log
[2025-02-26 04:48:21]  guid=816e4170-b57a-4a89-b304-da80b5c55386
[2025-02-26 04:48:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 04:48:21]  is_altstaged=None
[2025-02-26 04:48:21]  is_tar=False
[2025-02-26 04:48:21]  lfn=log.43401155._000857.job.log.tgz.1
[2025-02-26 04:48:21]  mtime=0
[2025-02-26 04:48:21]  protocol_id=None
[2025-02-26 04:48:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 04:48:21]  replicas=None
[2025-02-26 04:48:21]  scope=mc23_13p6TeV
[2025-02-26 04:48:21]  status=None
[2025-02-26 04:48:21]  status_code=0
[2025-02-26 04:48:21]  storage_token=
[2025-02-26 04:48:21]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6531061215/log.43401155._000857.job.log.tgz.1
[2025-02-26 04:48:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/e9/log.43401155._000857.job.log.tgz.1
[2025-02-26 04:48:21]  workdir=None
[2025-02-26 04:48:21] ]
[2025-02-26 04:48:21] 2025-02-26 03:48:03,113 | INFO     | transferring file log.43401155._000857.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6531061215/log.43401155._000857.job.log.tgz.1 to /var/lib/boinc
[2025-02-26 04:48:21] 2025-02-26 03:48:03,113 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6531061215/log.43401155._000857.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.434011
[2025-02-26 04:48:21] 2025-02-26 03:48:03,123 | INFO     | adding to output.list: log.43401155._000857.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/e9/log.43401155._000857.job.log.tg
[2025-02-26 04:48:21] 2025-02-26 03:48:03,124 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 04:48:21] 2025-02-26 03:48:03,124 | INFO     | summary of transferred files:
[2025-02-26 04:48:21] 2025-02-26 03:48:03,124 | INFO     |  -- lfn=log.43401155._000857.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 04:48:21] 2025-02-26 03:48:03,124 | INFO     | stage-out finished correctly
[2025-02-26 04:48:21] 2025-02-26 03:48:03,405 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 04:48:21] 2025-02-26 03:48:04,976 | INFO     | job 6531061215 has state=finished
[2025-02-26 04:48:21] 2025-02-26 03:48:04,976 | INFO     | preparing for final server update for job 6531061215 in state='finished'
[2025-02-26 04:48:21] 2025-02-26 03:48:04,976 | INFO     | this job has now completed (state=finished)
[2025-02-26 04:48:21] 2025-02-26 03:48:04,976 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 04:48:21] 2025-02-26 03:48:04,977 | INFO     | log transfer has been attempted: DONE
[2025-02-26 04:48:21] 2025-02-26 03:48:04,977 | INFO     | job 6531061215 has finished - writing final server update
[2025-02-26 04:48:21] 2025-02-26 03:48:04,977 | INFO     | total number of processed events: 400 (read)
[2025-02-26 04:48:21] 2025-02-26 03:48:04,979 | INFO     | executing command: lscpu
[2025-02-26 04:48:21] 2025-02-26 03:48:05,006 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-26 04:48:21] 2025-02-26 03:48:05,017 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 04:48:21] 2025-02-26 03:48:05,424 | INFO     | monitor loop #195: job 0:6531061215 is in state 'finished'
[2025-02-26 04:48:21] 2025-02-26 03:48:05,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 04:48:21] 2025-02-26 03:48:07,927 | INFO     | monitor loop #196: job 0:6531061215 is in state 'finished'
[2025-02-26 04:48:21] 2025-02-26 03:48:07,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 04:48:21] 2025-02-26 03:48:08,291 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 04:48:21] 2025-02-26 03:48:08,291 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6531061215/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 04:48:21] 2025-02-26 03:48:08,292 | INFO     | extracted standard info from prmon json
[2025-02-26 04:48:21] 2025-02-26 03:48:08,292 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 04:48:21] 2025-02-26 03:48:08,292 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 04:48:21] 2025-02-26 03:48:08,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 04:48:21] 2025-02-26 03:48:08,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | fitting pss+swap vs Time
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | model: linear, x: [1740539516.0, 1740539577.0, 1740539638.0, 1740539699.0, 1740539760.0, 1740539821.0, 1740539882.0, 1740539943.0, 1740540004.0, 1740540065.0, 1740
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | sum of square deviations: 12176972.5
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | sum of deviations: -235129929.00000003
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | mean x: 1740540522.5
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | mean y: 2741151.9411764704
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | -- intersect: 33611519481.451897
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | intersect: 33611519481.451897
[2025-02-26 04:48:21] 2025-02-26 03:48:08,294 | INFO     | chi2: 0.03593129093759017
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | -- intersect: 33611519481.451897
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | current memory leak: -19.31 B/s (using 34 data points, chi2=0.04)
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | ..............................
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | . Timing measurements:
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | . get job = 0 s
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | . initial setup = 1 s
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | . payload setup = 3 s
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | . stage-in = 0 s
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | . payload execution = 2470 s
[2025-02-26 04:48:21] 2025-02-26 03:48:08,295 | INFO     | . stage-out = 0 s
[2025-02-26 04:48:21] 2025-02-26 03:48:08,296 | INFO     | . log creation = 0 s
[2025-02-26 04:48:21] 2025-02-26 03:48:08,296 | INFO     | ..............................
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | 
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | job summary report
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | --------------------------------------------------
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | PanDA job id: 6531061215
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | task id: 43401155
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | errors: (none)
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | pilot state: finished 
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | transexitcode: 0
[2025-02-26 04:48:21] 2025-02-26 03:48:08,600 | INFO     | exeerrorcode: 0
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | exeerrordiag: 
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | exitcode: 0
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | exitmsg: OK
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | cpuconsumptiontime: 24705 s
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | nevents: 400
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | neventsw: 0
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | pid: 2651617
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | pgrp: 2651617
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | corecount: 12
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | event service: False
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | sizes: {0: 2370213, 1: 2370412, 3: 2370618, 11: 2370646, 2477: 2395771, 2478: 2404910, 2483: 2405024}
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | --------------------------------------------------
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | 
[2025-02-26 04:48:21] 2025-02-26 03:48:08,601 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-02-26 04:48:21] 2025-02-26 03:48:08,617 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,617 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,617 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,617 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 04:48:21] 2025-02-26 03:48:08,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 04:48:21] 2025-02-26 03:48:08,619 | INFO     | job 6531061215 has completed (purged errors)
[2025-02-26 04:48:21] 2025-02-26 03:48:08,619 | INFO     | overall cleanup function is called
[2025-02-26 04:48:21] 2025-02-26 03:48:09,626 | INFO     | --- collectZombieJob: --- 10, [2651617]
[2025-02-26 04:48:21] 2025-02-26 03:48:09,626 | INFO     | zombie collector waiting for pid 2651617
[2025-02-26 04:48:21] 2025-02-26 03:48:09,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 04:48:21] 2025-02-26 03:48:09,626 | INFO     | collected zombie processes
[2025-02-26 04:48:21] 2025-02-26 03:48:09,626 | INFO     | will attempt to kill all subprocesses of pid=2651617
[2025-02-26 04:48:21] 2025-02-26 03:48:09,676 | INFO     | process IDs to be killed: [2651617] (in reverse order)
[2025-02-26 04:48:21] 2025-02-26 03:48:09,726 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 04:48:21] 2025-02-26 03:48:09,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 04:48:21] 2025-02-26 03:48:09,731 | INFO     | did not find any defunct processes belonging to 2651617
[2025-02-26 04:48:21] 2025-02-26 03:48:09,735 | INFO     | did not find any defunct processes belonging to 2651617
[2025-02-26 04:48:21] 2025-02-26 03:48:09,735 | INFO     | ready for new job
[2025-02-26 04:48:21] 2025-02-26 03:48:09,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 04:48:21] 2025-02-26 03:48:09,736 | INFO     | **************************************
[2025-02-26 04:48:21] 2025-02-26 03:48:09,736 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 04:48:21] 2025-02-26 03:48:09,737 | INFO     | **************************************
[2025-02-26 04:48:21] 2025-02-26 03:48:09,737 | INFO     | 
[2025-02-26 04:48:21] 2025-02-26 03:48:09,738 | INFO     | architecture information:
[2025-02-26 04:48:21] 2025-02-26 03:48:09,738 | INFO     | executing command: cat /etc/os-release
[2025-02-26 04:48:21] 2025-02-26 03:48:09,747 | INFO     | cat /etc/os-release:
[2025-02-26 04:48:21] NAME="CentOS Linux"
[2025-02-26 04:48:21] VERSION="7 (Core)"
[2025-02-26 04:48:21] ID="centos"
[2025-02-26 04:48:21] ID_LIKE="rhel fedora"
[2025-02-26 04:48:21] VERSION_ID="7"
[2025-02-26 04:48:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 04:48:21] ANSI_COLOR="0;31"
[2025-02-26 04:48:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 04:48:21] HOME_URL="https://www.centos.org/"
[2025-02-26 04:48:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 04:48:21] 
[2025-02-26 04:48:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 04:48:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 04:48:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 04:48:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 04:48:21] 
[2025-02-26 04:48:21] 2025-02-26 03:48:09,747 | INFO     | **************************************
[2025-02-26 04:48:21] 2025-02-26 03:48:10,250 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-02-26 04:48:21] 2025-02-26 03:48:10,261 | INFO     | sufficient remaining disk space (475258683392 B)
[2025-02-26 04:48:21] 2025-02-26 03:48:10,262 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 04:48:21] 2025-02-26 03:48:10,262 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 04:48:21] 2025-02-26 03:48:10,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 04:48:21] 2025-02-26 03:48:10,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 04:48:21] 2025-02-26 03:48:10,267 | INFO     | all data control threads have been joined
[2025-02-26 04:48:21] 2025-02-26 03:48:10,382 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 04:48:21] 2025-02-26 03:48:10,382 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 04:48:21] 2025-02-26 03:48:10,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 04:48:21] 2025-02-26 03:48:10,430 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 04:48:21] 2025-02-26 03:48:10,430 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 04:48:21] 2025-02-26 03:48:10,430 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 04:48:21] 2025-02-26 03:48:10,431 | INFO     | will abort loop
[2025-02-26 04:48:21] 2025-02-26 03:48:10,723 | INFO     | all payload control threads have been joined
[2025-02-26 04:48:21] 2025-02-26 03:48:11,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 04:48:21] 2025-02-26 03:48:11,267 | INFO     | [job] retrieve thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:11,267 | INFO     | [job] queue monitor thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:11,272 | INFO     | [data] control thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:11,387 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:11,400 | INFO     | all job control threads have been joined
[2025-02-26 04:48:21] 2025-02-26 03:48:11,433 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:11,436 | INFO     | [job] job monitor thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:11,729 | INFO     | [payload] control thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:12,036 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:12,266 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:12,405 | INFO     | [job] control thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:12,522 | INFO     | [data] copytool_in thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:12,682 | INFO     | [job] validate thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:12,682 | INFO     | [payload] validate_post thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:12,684 | INFO     | [payload] failed_post thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:13,184 | INFO     | [data] copytool_out thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:14,268 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 04:48:21] 2025-02-26 03:48:15,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133884607428416)>', '<ExcThread(monitor, started 133884117255936)>']
[2025-02-26 04:48:21] 2025-02-26 03:48:16,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 04:48:21] 2025-02-26 03:48:16,413 | INFO     | [monitor] control thread has ended
[2025-02-26 04:48:21] 2025-02-26 03:48:20,989 | INFO     | all workflow threads have been joined
[2025-02-26 04:48:21] 2025-02-26 03:48:20,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 04:48:21] 2025-02-26 03:48:20,990 | INFO     | traces error code: 0
[2025-02-26 04:48:21] 2025-02-26 03:48:20,990 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 04:48:21] 2025-02-26 03:48:21,081 [wrapper] ==== pilot stdout END ====
[2025-02-26 04:48:21] 2025-02-26 03:48:21,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 04:48:21] 2025-02-26 03:48:21,084 [wrapper] pilotpid: 2644246
[2025-02-26 04:48:21] 2025-02-26 03:48:21,086 [wrapper] Pilot exit status: 0
[2025-02-26 04:48:21] 2025-02-26 03:48:21,092 [wrapper] pandaids: 6531061215
[2025-02-26 04:48:21] 2025-02-26 03:48:21,126 [wrapper] cleanup supervisor_pilot 2720192 2644247
[2025-02-26 04:48:21] 2025-02-26 03:48:21,128 [wrapper] Test setup, not cleaning
[2025-02-26 04:48:21] 2025-02-26 03:48:21,132 [wrapper] apfmon messages muted
[2025-02-26 04:48:21] 2025-02-26 03:48:21,133 [wrapper] ==== wrapper stdout END ====
[2025-02-26 04:48:21] 2025-02-26 03:48:21,134 [wrapper] ==== wrapper stderr END ====
[2025-02-26 04:48:21]  *** Error codes and diagnostics ***
[2025-02-26 04:48:21]     "exeErrorCode": 0,
[2025-02-26 04:48:21]     "exeErrorDiag": "",
[2025-02-26 04:48:21]     "pilotErrorCode": 0,
[2025-02-26 04:48:21]     "pilotErrorDiag": "",
[2025-02-26 04:48:21]  *** Listing of results directory ***
[2025-02-26 04:48:21] total 426209
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc    491065 Feb 25 23:04 pilot3.tar.gz
[2025-02-26 04:48:21] -rwx------ 1 boinc boinc     35865 Feb 25 23:23 runpilot2-wrapper.sh
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc      5118 Feb 25 23:24 queuedata.json
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc       100 Feb 26 04:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 04:48:21] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 04:06 run_atlas
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc       105 Feb 26 04:06 job.xml
[2025-02-26 04:48:21] -rw-r--r-- 2 boinc boinc 248244853 Feb 26 04:06 EVNT.43401153._000035.pool.root.1
[2025-02-26 04:48:21] -rw-r--r-- 2 boinc boinc     17569 Feb 26 04:06 start_atlas.sh
[2025-02-26 04:48:21] drwxrwx--x 2 boinc boinc         5 Feb 26 04:06 shared
[2025-02-26 04:48:21] -rw-r--r-- 2 boinc boinc    503554 Feb 26 04:06 input.tar.gz
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc         0 Feb 26 04:06 boinc_lockfile
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc      2537 Feb 26 04:06 pandaJob.out
[2025-02-26 04:48:21] -rw------- 1 boinc boinc       459 Feb 26 04:06 setup.sh.local
[2025-02-26 04:48:21] -rw------- 1 boinc boinc    987482 Feb 26 04:06 agis_schedconf.cvmfs.json
[2025-02-26 04:48:21] -rw------- 1 boinc boinc   1573632 Feb 26 04:06 agis_ddmendpoints.agis.ALL.json
[2025-02-26 04:48:21] drwx------ 4 boinc boinc        20 Feb 26 04:06 pilot3
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc      6810 Feb 26 04:41 init_data.xml
[2025-02-26 04:48:21] -rw------- 1 boinc boinc        95 Feb 26 04:47 pilot_heartbeat.json
[2025-02-26 04:48:21] -rw------- 1 boinc boinc 185949959 Feb 26 04:47 HITS.43401155._000857.pool.root.1
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc       530 Feb 26 04:47 boinc_task_state.xml
[2025-02-26 04:48:21] -rw------- 1 boinc boinc      1042 Feb 26 04:47 memory_monitor_summary.json
[2025-02-26 04:48:21] -rw------- 1 boinc boinc    336727 Feb 26 04:48 log.43401155._000857.job.log.tgz.1
[2025-02-26 04:48:21] -rw------- 1 boinc boinc      7701 Feb 26 04:48 heartbeat.json
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc        27 Feb 26 04:48 wrapper_checkpoint.txt
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc      8192 Feb 26 04:48 boinc_mmap_file
[2025-02-26 04:48:21] -rw------- 1 boinc boinc      4409 Feb 26 04:48 pilotlog.txt
[2025-02-26 04:48:21] -rw------- 1 boinc boinc    277258 Feb 26 04:48 log.43401155._000857.job.log.1
[2025-02-26 04:48:21] -rw------- 1 boinc boinc       357 Feb 26 04:48 output.list
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc       620 Feb 26 04:48 runtime_log
[2025-02-26 04:48:21] -rw------- 1 boinc boinc    634880 Feb 26 04:48 result.tar.gz
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc     11442 Feb 26 04:48 runtime_log.err
[2025-02-26 04:48:21] -rw------- 1 boinc boinc       645 Feb 26 04:48 n0DMDmSWI76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmvRgKDmYmzMAo.diag
[2025-02-26 04:48:21] -rw-r--r-- 1 boinc boinc     21075 Feb 26 04:48 stderr.txt
[2025-02-26 04:48:21] HITS file was successfully produced:
[2025-02-26 04:48:21] -rw------- 1 boinc boinc 185949959 Feb 26 04:47 shared/HITS.pool.root.1
[2025-02-26 04:48:21]  *** Contents of shared directory: ***
[2025-02-26 04:48:21] total 424839
[2025-02-26 04:48:21] -rw-r--r-- 2 boinc boinc 248244853 Feb 26 04:06 ATLAS.root_0
[2025-02-26 04:48:21] -rw-r--r-- 2 boinc boinc     17569 Feb 26 04:06 start_atlas.sh
[2025-02-26 04:48:21] -rw-r--r-- 2 boinc boinc    503554 Feb 26 04:06 input.tar.gz
[2025-02-26 04:48:21] -rw------- 1 boinc boinc 185949959 Feb 26 04:47 HITS.pool.root.1
[2025-02-26 04:48:21] -rw------- 1 boinc boinc    634880 Feb 26 04:48 result.tar.gz
04:48:22 (2640284): run_atlas exited; CPU time 24698.735800
04:48:22 (2640284): called boinc_finish(0)

</stderr_txt>
]]>

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