Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
09:27:09 (2339473): wrapper (7.7.26015): starting
09:27:09 (2339473): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 09:27:09] Arguments: --nthreads 12
[2025-02-26 09:27:09] Threads: 12
[2025-02-26 09:27:09] Checking for CVMFS
[2025-02-26 09:27:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 09:27:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 09:27:09] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 09:27:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 09:27:09] 2.12.6.0 1166473 1053 62296 143059 2 56 5290666 6291457 3684 130560 0 4190589 99.904 717929 280 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.11.5:3128 1
[2025-02-26 09:27:09] CVMFS is ok
[2025-02-26 09:27:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 09:27:09] Checking for apptainer binary...
[2025-02-26 09:27:09] apptainer is not installed, using version from CVMFS
[2025-02-26 09:27:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 09:27:10] pm111
[2025-02-26 09:27:10] apptainer works
[2025-02-26 09:27:10] Set ATHENA_PROC_NUMBER=12
[2025-02-26 09:27:10] Set ATHENA_CORE_NUMBER=12
[2025-02-26 09:27:10] Starting ATLAS job with PandaID=6531136585
[2025-02-26 09:27:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 11:06:47]  *** The last 200 lines of the pilot log: ***
[2025-02-26 11:06:47]  replicas=None
[2025-02-26 11:06:47]  scope=mc23_13p6TeV
[2025-02-26 11:06:47]  status=None
[2025-02-26 11:06:47]  status_code=0
[2025-02-26 11:06:47]  storage_token=
[2025-02-26 11:06:47]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6531136585/log.43401163._001933.job.log.tgz.1
[2025-02-26 11:06:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/f2/log.43401163._001933.job.log.tgz.1
[2025-02-26 11:06:47]  workdir=None
[2025-02-26 11:06:47] ]
[2025-02-26 11:06:47] 2025-02-26 04:06:25,678 | INFO     | transferring file log.43401163._001933.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6531136585/log.43401163._001933.job.log.tgz.1 to /var/lib/boinc
[2025-02-26 11:06:47] 2025-02-26 04:06:25,678 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6531136585/log.43401163._001933.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.434011
[2025-02-26 11:06:47] 2025-02-26 04:06:25,694 | INFO     | adding to output.list: log.43401163._001933.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/83/f2/log.43401163._001933.job.log.tg
[2025-02-26 11:06:47] 2025-02-26 04:06:25,695 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 11:06:47] 2025-02-26 04:06:25,695 | INFO     | summary of transferred files:
[2025-02-26 11:06:47] 2025-02-26 04:06:25,696 | INFO     |  -- lfn=log.43401163._001933.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 11:06:47] 2025-02-26 04:06:25,696 | INFO     | stage-out finished correctly
[2025-02-26 11:06:47] 2025-02-26 04:06:25,806 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 11:06:47] 2025-02-26 04:06:26,278 | WARNING  | process 2357862 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 11:06:47] 2025-02-26 04:06:26,279 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6531136585/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 11:06:47] 2025-02-26 04:06:26,372 | INFO     | job 6531136585 has state=finished
[2025-02-26 11:06:47] 2025-02-26 04:06:26,372 | INFO     | preparing for final server update for job 6531136585 in state='finished'
[2025-02-26 11:06:47] 2025-02-26 04:06:26,373 | INFO     | this job has now completed (state=finished)
[2025-02-26 11:06:47] 2025-02-26 04:06:26,373 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 11:06:47] 2025-02-26 04:06:26,373 | INFO     | log transfer has been attempted: DONE
[2025-02-26 11:06:47] 2025-02-26 04:06:26,373 | INFO     | job 6531136585 has finished - writing final server update
[2025-02-26 11:06:47] 2025-02-26 04:06:26,374 | INFO     | total number of processed events: 400 (read)
[2025-02-26 11:06:47] 2025-02-26 04:06:26,384 | INFO     | number of running child processes to parent process 2357862: 1
[2025-02-26 11:06:47] 2025-02-26 04:06:26,385 | INFO     | maximum number of monitored processes: 6
[2025-02-26 11:06:47] 2025-02-26 04:06:26,388 | INFO     | executing command: lscpu
[2025-02-26 11:06:47] 2025-02-26 04:06:26,441 | INFO     | found 36 cores (18 cores per socket, 2 sockets)
[2025-02-26 11:06:47] 2025-02-26 04:06:26,464 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 11:06:47] 2025-02-26 04:06:27,590 | INFO     | PID=2343692 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-26 11:06:47] 2025-02-26 04:06:27,590 | INFO     | .. there are 5 such processes running
[2025-02-26 11:06:47] 2025-02-26 04:06:28,888 | INFO     | monitor loop #441: job 0:6531136585 is in state 'finished'
[2025-02-26 11:06:47] 2025-02-26 04:06:28,888 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 11:06:47] 2025-02-26 04:06:31,390 | INFO     | monitor loop #442: job 0:6531136585 is in state 'finished'
[2025-02-26 11:06:47] 2025-02-26 04:06:31,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 11:06:47] 2025-02-26 04:06:33,894 | INFO     | monitor loop #443: job 0:6531136585 is in state 'finished'
[2025-02-26 11:06:47] 2025-02-26 04:06:33,894 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 11:06:47] 2025-02-26 04:06:34,389 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 11:06:47] 2025-02-26 04:06:34,390 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6531136585/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 11:06:47] 2025-02-26 04:06:34,391 | INFO     | extracted standard info from prmon json
[2025-02-26 11:06:47] 2025-02-26 04:06:34,391 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 11:06:47] 2025-02-26 04:06:34,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 11:06:47] 2025-02-26 04:06:34,392 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 11:06:47] 2025-02-26 04:06:34,392 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 11:06:47] 2025-02-26 04:06:34,395 | INFO     | fitting pss+swap vs Time
[2025-02-26 11:06:47] 2025-02-26 04:06:34,395 | INFO     | model: linear, x: [1740537171.0, 1740537232.0, 1740537293.0, 1740537354.0, 1740537415.0, 1740537476.0, 1740537537.0, 1740537598.0, 1740537659.0, 1740537720.0, 1740
[2025-02-26 11:06:47] 2025-02-26 04:06:34,395 | INFO     | sum of square deviations: 226022842.5
[2025-02-26 11:06:47] 2025-02-26 04:06:34,396 | INFO     | sum of deviations: 30975825711.500004
[2025-02-26 11:06:47] 2025-02-26 04:06:34,396 | INFO     | mean x: 1740539885.5
[2025-02-26 11:06:47] 2025-02-26 04:06:34,396 | INFO     | mean y: 2575718.1
[2025-02-26 11:06:47] 2025-02-26 04:06:34,396 | INFO     | -- intersect: -238533757781.74158
[2025-02-26 11:06:47] 2025-02-26 04:06:34,396 | INFO     | intersect: -238533757781.74158
[2025-02-26 11:06:47] 2025-02-26 04:06:34,397 | INFO     | chi2: 2.669446498912808
[2025-02-26 11:06:47] 2025-02-26 04:06:34,397 | INFO     | -- intersect: -238533757781.74158
[2025-02-26 11:06:47] 2025-02-26 04:06:34,397 | INFO     | current memory leak: 137.05 B/s (using 90 data points, chi2=2.67)
[2025-02-26 11:06:47] 2025-02-26 04:06:34,398 | INFO     | ..............................
[2025-02-26 11:06:47] 2025-02-26 04:06:34,398 | INFO     | . Timing measurements:
[2025-02-26 11:06:47] 2025-02-26 04:06:34,398 | INFO     | . get job = 0 s
[2025-02-26 11:06:47] 2025-02-26 04:06:34,398 | INFO     | . initial setup = 4 s
[2025-02-26 11:06:47] 2025-02-26 04:06:34,398 | INFO     | . payload setup = 4 s
[2025-02-26 11:06:47] 2025-02-26 04:06:34,399 | INFO     | . stage-in = 0 s
[2025-02-26 11:06:47] 2025-02-26 04:06:34,399 | INFO     | . payload execution = 5918 s
[2025-02-26 11:06:47] 2025-02-26 04:06:34,399 | INFO     | . stage-out = 1 s
[2025-02-26 11:06:47] 2025-02-26 04:06:34,399 | INFO     | . log creation = 0 s
[2025-02-26 11:06:47] 2025-02-26 04:06:34,399 | INFO     | ..............................
[2025-02-26 11:06:47] 2025-02-26 04:06:34,514 | INFO     | 
[2025-02-26 11:06:47] 2025-02-26 04:06:34,514 | INFO     | job summary report
[2025-02-26 11:06:47] 2025-02-26 04:06:34,514 | INFO     | --------------------------------------------------
[2025-02-26 11:06:47] 2025-02-26 04:06:34,514 | INFO     | PanDA job id: 6531136585
[2025-02-26 11:06:47] 2025-02-26 04:06:34,514 | INFO     | task id: 43401163
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | errors: (none)
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | pilot state: finished 
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | transexitcode: 0
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | exeerrorcode: 0
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | exeerrordiag: 
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | exitcode: 0
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | exitmsg: OK
[2025-02-26 11:06:47] 2025-02-26 04:06:34,515 | INFO     | cpuconsumptiontime: 51795 s
[2025-02-26 11:06:47] 2025-02-26 04:06:34,516 | INFO     | nevents: 400
[2025-02-26 11:06:47] 2025-02-26 04:06:34,516 | INFO     | neventsw: 0
[2025-02-26 11:06:47] 2025-02-26 04:06:34,516 | INFO     | pid: 2357862
[2025-02-26 11:06:47] 2025-02-26 04:06:34,516 | INFO     | pgrp: 2357862
[2025-02-26 11:06:47] 2025-02-26 04:06:34,516 | INFO     | corecount: 12
[2025-02-26 11:06:47] 2025-02-26 04:06:34,516 | INFO     | event service: False
[2025-02-26 11:06:47] 2025-02-26 04:06:34,516 | INFO     | sizes: {0: 2370390, 4: 2370596, 11: 2370624, 5927: 2397292, 5928: 2397291, 5929: 2406486, 5938: 2406600}
[2025-02-26 11:06:47] 2025-02-26 04:06:34,516 | INFO     | --------------------------------------------------
[2025-02-26 11:06:47] 2025-02-26 04:06:34,517 | INFO     | 
[2025-02-26 11:06:47] 2025-02-26 04:06:34,517 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-02-26 11:06:47] 2025-02-26 04:06:34,535 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,535 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,535 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,536 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,537 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,537 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,537 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 11:06:47] 2025-02-26 04:06:34,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,538 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 11:06:47] 2025-02-26 04:06:34,538 | INFO     | job 6531136585 has completed (purged errors)
[2025-02-26 11:06:47] 2025-02-26 04:06:34,538 | INFO     | overall cleanup function is called
[2025-02-26 11:06:47] 2025-02-26 04:06:35,546 | INFO     | --- collectZombieJob: --- 10, [2357862]
[2025-02-26 11:06:47] 2025-02-26 04:06:35,546 | INFO     | zombie collector waiting for pid 2357862
[2025-02-26 11:06:47] 2025-02-26 04:06:35,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 11:06:47] 2025-02-26 04:06:35,546 | INFO     | collected zombie processes
[2025-02-26 11:06:47] 2025-02-26 04:06:35,546 | INFO     | will attempt to kill all subprocesses of pid=2357862
[2025-02-26 11:06:47] 2025-02-26 04:06:35,645 | INFO     | process IDs to be killed: [2357862] (in reverse order)
[2025-02-26 11:06:47] 2025-02-26 04:06:35,755 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 11:06:47] 2025-02-26 04:06:35,756 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 11:06:47] 2025-02-26 04:06:35,766 | INFO     | did not find any defunct processes belonging to 2357862
[2025-02-26 11:06:47] 2025-02-26 04:06:35,775 | INFO     | did not find any defunct processes belonging to 2357862
[2025-02-26 11:06:47] 2025-02-26 04:06:35,775 | INFO     | ready for new job
[2025-02-26 11:06:47] 2025-02-26 04:06:35,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 11:06:47] 2025-02-26 04:06:35,777 | INFO     | **************************************
[2025-02-26 11:06:47] 2025-02-26 04:06:35,777 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 11:06:47] 2025-02-26 04:06:35,777 | INFO     | **************************************
[2025-02-26 11:06:47] 2025-02-26 04:06:35,777 | INFO     | 
[2025-02-26 11:06:47] 2025-02-26 04:06:35,782 | INFO     | architecture information:
[2025-02-26 11:06:47] 2025-02-26 04:06:35,782 | INFO     | executing command: cat /etc/os-release
[2025-02-26 11:06:47] 2025-02-26 04:06:35,795 | INFO     | cat /etc/os-release:
[2025-02-26 11:06:47] NAME="CentOS Linux"
[2025-02-26 11:06:47] VERSION="7 (Core)"
[2025-02-26 11:06:47] ID="centos"
[2025-02-26 11:06:47] ID_LIKE="rhel fedora"
[2025-02-26 11:06:47] VERSION_ID="7"
[2025-02-26 11:06:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 11:06:47] ANSI_COLOR="0;31"
[2025-02-26 11:06:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 11:06:47] HOME_URL="https://www.centos.org/"
[2025-02-26 11:06:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 11:06:47] 
[2025-02-26 11:06:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 11:06:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 11:06:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 11:06:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 11:06:47] 
[2025-02-26 11:06:47] 2025-02-26 04:06:35,795 | INFO     | **************************************
[2025-02-26 11:06:47] 2025-02-26 04:06:36,298 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-02-26 11:06:47] 2025-02-26 04:06:36,311 | INFO     | sufficient remaining disk space (1728538738688 B)
[2025-02-26 11:06:47] 2025-02-26 04:06:36,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 11:06:47] 2025-02-26 04:06:36,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 11:06:47] 2025-02-26 04:06:36,312 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 11:06:47] 2025-02-26 04:06:36,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 11:06:47] 2025-02-26 04:06:36,312 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 11:06:47] 2025-02-26 04:06:36,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 11:06:47] 2025-02-26 04:06:36,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 11:06:47] 2025-02-26 04:06:36,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 11:06:47] 2025-02-26 04:06:36,359 | INFO     | all payload control threads have been joined
[2025-02-26 11:06:47] 2025-02-26 04:06:36,397 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 11:06:47] 2025-02-26 04:06:36,397 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 11:06:47] 2025-02-26 04:06:36,398 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 11:06:47] 2025-02-26 04:06:36,398 | INFO     | will abort loop
[2025-02-26 11:06:47] 2025-02-26 04:06:36,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 11:06:47] 2025-02-26 04:06:36,517 | INFO     | all data control threads have been joined
[2025-02-26 11:06:47] 2025-02-26 04:06:37,309 | INFO     | all job control threads have been joined
[2025-02-26 11:06:47] 2025-02-26 04:06:37,315 | INFO     | [job] queue monitor thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:37,316 | INFO     | [job] retrieve thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:37,364 | INFO     | [payload] control thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:37,402 | INFO     | [job] job monitor thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:37,522 | INFO     | [data] control thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:37,633 | INFO     | [job] validate thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:37,756 | INFO     | [payload] failed_post thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:37,809 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:37,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:38,178 | INFO     | [payload] validate_post thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:38,227 | INFO     | [data] copytool_in thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:38,314 | INFO     | [job] control thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:38,323 | INFO     | [data] copytool_out thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:38,728 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:38,763 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:40,429 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 11:06:47] 2025-02-26 04:06:42,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136228237805376)>', '<ExcThread(monitor, started 136227795764992)>']
[2025-02-26 11:06:47] 2025-02-26 04:06:42,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 11:06:47] 2025-02-26 04:06:42,343 | INFO     | [monitor] control thread has ended
[2025-02-26 11:06:47] 2025-02-26 04:06:47,354 | INFO     | all workflow threads have been joined
[2025-02-26 11:06:47] 2025-02-26 04:06:47,355 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 11:06:47] 2025-02-26 04:06:47,355 | INFO     | traces error code: 0
[2025-02-26 11:06:47] 2025-02-26 04:06:47,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 11:06:47] 2025-02-26 04:06:47,471 [wrapper] ==== pilot stdout END ====
[2025-02-26 11:06:47] 2025-02-26 04:06:47,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 11:06:47] 2025-02-26 04:06:47,476 [wrapper] pilotpid: 2343692
[2025-02-26 11:06:47] 2025-02-26 04:06:47,478 [wrapper] Pilot exit status: 0
[2025-02-26 11:06:47] 2025-02-26 04:06:47,485 [wrapper] pandaids: 6531136585
[2025-02-26 11:06:47] 2025-02-26 04:06:47,552 [wrapper] cleanup supervisor_pilot 2730710 2343693
[2025-02-26 11:06:47] 2025-02-26 04:06:47,555 [wrapper] Test setup, not cleaning
[2025-02-26 11:06:47] 2025-02-26 04:06:47,560 [wrapper] apfmon messages muted
[2025-02-26 11:06:47] 2025-02-26 04:06:47,562 [wrapper] ==== wrapper stdout END ====
[2025-02-26 11:06:47] 2025-02-26 04:06:47,564 [wrapper] ==== wrapper stderr END ====
[2025-02-26 11:06:47]  *** Error codes and diagnostics ***
[2025-02-26 11:06:47]     "exeErrorCode": 0,
[2025-02-26 11:06:47]     "exeErrorDiag": "",
[2025-02-26 11:06:47]     "pilotErrorCode": 0,
[2025-02-26 11:06:47]     "pilotErrorDiag": "",
[2025-02-26 11:06:47]  *** Listing of results directory ***
[2025-02-26 11:06:47] total 437477
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc    491065 Feb 26 06:30 pilot3.tar.gz
[2025-02-26 11:06:47] -rwx------ 1 boinc boinc     35865 Feb 26 06:33 runpilot2-wrapper.sh
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc      5118 Feb 26 06:33 queuedata.json
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc       100 Feb 26 09:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 11:06:47] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 09:27 run_atlas
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc       105 Feb 26 09:27 job.xml
[2025-02-26 11:06:47] -rw-r--r-- 2 boinc boinc 256039110 Feb 26 09:27 EVNT.43401161._000076.pool.root.1
[2025-02-26 11:06:47] -rw-r--r-- 2 boinc boinc     17569 Feb 26 09:27 start_atlas.sh
[2025-02-26 11:06:47] drwxrwx--x 2 boinc boinc         5 Feb 26 09:27 shared
[2025-02-26 11:06:47] -rw-r--r-- 2 boinc boinc    503548 Feb 26 09:27 input.tar.gz
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc         0 Feb 26 09:27 boinc_lockfile
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc      2541 Feb 26 09:27 pandaJob.out
[2025-02-26 11:06:47] -rw------- 1 boinc boinc       459 Feb 26 09:27 setup.sh.local
[2025-02-26 11:06:47] -rw------- 1 boinc boinc    987482 Feb 26 09:27 agis_schedconf.cvmfs.json
[2025-02-26 11:06:47] -rw------- 1 boinc boinc   1573632 Feb 26 09:27 agis_ddmendpoints.agis.ALL.json
[2025-02-26 11:06:47] drwx------ 4 boinc boinc        20 Feb 26 09:27 pilot3
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc      6814 Feb 26 10:36 init_data.xml
[2025-02-26 11:06:47] -rw------- 1 boinc boinc 189585855 Feb 26 11:05 HITS.43401163._001933.pool.root.1
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc       530 Feb 26 11:05 boinc_task_state.xml
[2025-02-26 11:06:47] -rw------- 1 boinc boinc        95 Feb 26 11:06 pilot_heartbeat.json
[2025-02-26 11:06:47] -rw------- 1 boinc boinc      1046 Feb 26 11:06 memory_monitor_summary.json
[2025-02-26 11:06:47] -rw------- 1 boinc boinc    379641 Feb 26 11:06 log.43401163._001933.job.log.tgz.1
[2025-02-26 11:06:47] -rw------- 1 boinc boinc      7711 Feb 26 11:06 heartbeat.json
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc        27 Feb 26 11:06 wrapper_checkpoint.txt
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc      8192 Feb 26 11:06 boinc_mmap_file
[2025-02-26 11:06:47] -rw------- 1 boinc boinc      4533 Feb 26 11:06 pilotlog.txt
[2025-02-26 11:06:47] -rw------- 1 boinc boinc    581566 Feb 26 11:06 log.43401163._001933.job.log.1
[2025-02-26 11:06:47] -rw------- 1 boinc boinc       357 Feb 26 11:06 output.list
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc       620 Feb 26 11:06 runtime_log
[2025-02-26 11:06:47] -rw------- 1 boinc boinc    983040 Feb 26 11:06 result.tar.gz
[2025-02-26 11:06:47] -rw------- 1 boinc boinc       648 Feb 26 11:06 U9ZLDmbbJ76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmGggKDmgDdgln.diag
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc     11454 Feb 26 11:06 runtime_log.err
[2025-02-26 11:06:47] -rw-r--r-- 1 boinc boinc     21736 Feb 26 11:06 stderr.txt
[2025-02-26 11:06:47] HITS file was successfully produced:
[2025-02-26 11:06:47] -rw------- 1 boinc boinc 189585855 Feb 26 11:05 shared/HITS.pool.root.1
[2025-02-26 11:06:47]  *** Contents of shared directory: ***
[2025-02-26 11:06:47] total 436007
[2025-02-26 11:06:47] -rw-r--r-- 2 boinc boinc 256039110 Feb 26 09:27 ATLAS.root_0
[2025-02-26 11:06:47] -rw-r--r-- 2 boinc boinc     17569 Feb 26 09:27 start_atlas.sh
[2025-02-26 11:06:47] -rw-r--r-- 2 boinc boinc    503548 Feb 26 09:27 input.tar.gz
[2025-02-26 11:06:47] -rw------- 1 boinc boinc 189585855 Feb 26 11:05 HITS.pool.root.1
[2025-02-26 11:06:47] -rw------- 1 boinc boinc    983040 Feb 26 11:06 result.tar.gz
11:06:49 (2339473): run_atlas exited; CPU time 51816.528331
11:06:49 (2339473): called boinc_finish(0)

</stderr_txt>
]]>

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