Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-25 19:26:17 (10492): Detected: vboxwrapper 26206
2025-02-25 19:26:17 (10492): Detected: BOINC client v7.20.2
2025-02-25 19:26:18 (10492): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-02-25 19:26:18 (10492): Successfully copied 'init_data.xml' to the shared directory.
2025-02-25 19:26:19 (10492): Create VM. (boinc_5f9aa1ffa3fee738, slot#5)
2025-02-25 19:26:19 (10492): Setting Memory Size for VM. (4800MB)
2025-02-25 19:26:19 (10492): Setting CPU Count for VM. (8)
2025-02-25 19:26:20 (10492): Setting Chipset Options for VM.
2025-02-25 19:26:20 (10492): Setting Graphics Controller Options for VM.
2025-02-25 19:26:20 (10492): Setting Boot Options for VM.
2025-02-25 19:26:20 (10492): Setting Network Configuration for NAT.
2025-02-25 19:26:21 (10492): Enabling VM Network Access.
2025-02-25 19:26:21 (10492): Disabling USB Support for VM.
2025-02-25 19:26:21 (10492): Disabling COM Port Support for VM.
2025-02-25 19:26:21 (10492): Disabling LPT Port Support for VM.
2025-02-25 19:26:22 (10492): Disabling Audio Support for VM.
2025-02-25 19:26:22 (10492): Disabling Clipboard Support for VM.
2025-02-25 19:26:22 (10492): Disabling Drag and Drop Support for VM.
2025-02-25 19:26:22 (10492): Adding storage controller(s) to VM.
2025-02-25 19:26:23 (10492): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-25 19:26:24 (10492): Adding VirtualBox Guest Additions to VM.
2025-02-25 19:26:24 (10492): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-25 19:26:24 (10492): forwarding host port 63543 to guest port 80
2025-02-25 19:26:25 (10492): Enabling remote desktop for VM.
2025-02-25 19:26:25 (10492): Required extension pack not installed, remote desktop not enabled.
2025-02-25 19:26:25 (10492): Enabling shared directory for VM.
2025-02-25 19:26:25 (10492): Starting VM using VBoxManage interface. (boinc_5f9aa1ffa3fee738, slot#5)
2025-02-25 19:26:29 (10492): Successfully started VM. (PID = '32924')
2025-02-25 19:26:29 (10492): Reporting VM Process ID to BOINC.
2025-02-25 19:26:29 (10492): Guest Log: BIOS: VirtualBox 6.0.14
2025-02-25 19:26:29 (10492): Guest Log: CPUID EDX: 0x178bfbff
2025-02-25 19:26:29 (10492): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-25 19:26:29 (10492): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-25 19:26:29 (10492): Detected: Web Application Enabled (http://localhost:63543)
2025-02-25 19:26:29 (10492): Preference change detected
2025-02-25 19:26:29 (10492): Setting CPU throttle for VM. (100%)
2025-02-25 19:26:29 (10492): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-25 19:26:31 (10492): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-25 19:26:31 (10492): Guest Log: BIOS: Booting from Hard Disk...
2025-02-25 19:26:34 (10492): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-25 19:26:34 (10492): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-25 19:26:34 (10492): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-25 19:26:41 (10492): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-25 19:26:41 (10492): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-25 19:26:45 (10492): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-25 19:26:45 (10492): Guest Log: 00:00:00.000088 main     Log opened 2025-02-25T19:26:43.511799000Z
2025-02-25 19:26:45 (10492): Guest Log: 00:00:00.000154 main     OS Product: Linux
2025-02-25 19:26:45 (10492): Guest Log: 00:00:00.000175 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-25 19:26:45 (10492): Guest Log: 00:00:00.000192 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-25 19:26:45 (10492): Guest Log: 00:00:00.000210 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-25 19:26:45 (10492): Guest Log: 00:00:00.000210 main     Process ID: 1365
2025-02-25 19:26:45 (10492): Guest Log: 00:00:00.000210 main     Package type: LINUX_64BITS_GENERIC
2025-02-25 19:26:45 (10492): Guest Log: 00:00:00.000968 main     5.2.32 r132073 started. Verbose level = 0
2025-02-25 19:26:45 (10492): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-25 19:26:45 (10492): Guest Log: [INFO] Mounting shared directory
2025-02-25 19:26:45 (10492): Guest Log: [INFO] Checking for init_data.xml
2025-02-25 19:26:51 (10492): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-25 19:26:51 (10492): Guest Log: [INFO] Detected branch: prod
2025-02-25 19:26:51 (10492): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-25 19:26:51 (10492): Guest Log: Copying input files
2025-02-25 19:26:52 (10492): Guest Log: Copied input files into RunAtlas.
2025-02-25 19:26:52 (10492): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-25 19:26:52 (10492): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-25 19:26:52 (10492): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-25 19:26:52 (10492): Guest Log: Further information can be found at the LHC@home message board.
2025-02-25 19:26:55 (10492): Guest Log: 00:00:10.005526 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 489 517 000ns (GuestNow=1 740 540 415 003 853 000 ns GuestLast=1 740 511 603 514 336 000 ns fSetTimeLastLoop=true )
2025-02-25 19:27:04 (10492): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-25 19:27:04 (10492): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-25 19:27:04 (10492): Guest Log: 2.6.3.0 1647 0 30172 143061 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-02-25 19:27:04 (10492): Guest Log: copied the webapp to /var/www
2025-02-25 19:27:04 (10492): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-25 19:27:04 (10492): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-25 19:27:04 (10492): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-25 19:27:04 (10492): Guest Log:  *** Starting ATLAS job. (PandaID=6531080765 taskID=43401163) ***
2025-02-25 20:38:01 (10492): Guest Log:  *** Job finished ***
2025-02-25 20:38:01 (10492): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:47,590 | INFO     | [data] queue_monitor thread has finished
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:51,424 | INFO     | job.realtimelogging is not enabled
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:52,427 | INFO     | [payload] run_realtimelog thread has finished
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:53,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140416517424960)>', '<ExcThread(monitor, started 140415541954304)>']
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:53,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:53,560 | INFO     | [monitor] control thread has ended
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,205 | INFO     | all workflow threads have been joined
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,205 | INFO     | end of generic workflow (traces error code: 0)
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,205 | INFO     | traces error code: 0
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,280 [wrapper] ==== pilot stdout END ====
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,284 [wrapper] ==== wrapper stdout RESUME ====
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,288 [wrapper] pilotpid: 6014
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,292 [wrapper] Pilot exit status: 0
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,536 [wrapper] pandaids: 6531080765
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,560 [wrapper] cleanup supervisor_pilot 22719 6015
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,565 [wrapper] Test setup, not cleaning
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,577 [wrapper] apfmon messages muted
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,582 [wrapper] ==== wrapper stdout END ====
2025-02-25 20:38:01 (10492): Guest Log: 2025-02-26 04:37:58,587 [wrapper] ==== wrapper stderr END ====
2025-02-25 20:38:01 (10492): Guest Log:  *** Error codes and diagnostics ***
2025-02-25 20:38:01 (10492): Guest Log:     "exeErrorCode": 0,
2025-02-25 20:38:01 (10492): Guest Log:     "exeErrorDiag": "",
2025-02-25 20:38:01 (10492): Guest Log:     "pilotErrorCode": 0,
2025-02-25 20:38:01 (10492): Guest Log:     "pilotErrorDiag": "",
2025-02-25 20:38:01 (10492): Guest Log:  *** Listing of results directory ***
2025-02-25 20:38:01 (10492): Guest Log: total 185264
2025-02-25 20:38:01 (10492): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 22:35 pilot3.tar.gz
2025-02-25 20:38:01 (10492): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 22:54 queuedata.json
2025-02-25 20:38:01 (10492): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 22:54 runpilot2-wrapper.sh
2025-02-25 20:38:01 (10492): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 26 03:26 start_atlas.sh
2025-02-25 20:38:01 (10492): Guest Log: -rwxr-xr-x. 1 atlas atlas    503554 Feb 26 03:26 input.tar.gz
2025-02-25 20:38:01 (10492): Guest Log: -rwxr-xr-x. 1 atlas atlas      8900 Feb 26 03:26 init_data.xml
2025-02-25 20:38:01 (10492): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 03:26 EVNT.43401161._000056.pool.root.1 -> /data/./ATLAS.root_0
2025-02-25 20:38:01 (10492): Guest Log: -rw-r--r--. 1 atlas atlas      2540 Feb 26 03:27 pandaJob.out
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas       424 Feb 26 03:27 setup.sh.local
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas    987482 Feb 26 03:28 agis_schedconf.cvmfs.json
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas   1573632 Feb 26 03:28 agis_ddmendpoints.agis.ALL.json
2025-02-25 20:38:01 (10492): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 03:28 pilot3
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 04:36 pilot_heartbeat.json
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas 184689028 Feb 26 04:37 HITS.43401163._001781.pool.root.1
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas      1026 Feb 26 04:37 memory_monitor_summary.json
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas    287718 Feb 26 04:37 log.43401163._001781.job.log.tgz.1
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas      7712 Feb 26 04:37 heartbeat.json
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas      4470 Feb 26 04:37 pilotlog.txt
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas    354731 Feb 26 04:37 log.43401163._001781.job.log.1
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 04:37 output.list
2025-02-25 20:38:01 (10492): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 04:37 runtime_log
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas    665600 Feb 26 04:37 result.tar.gz
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas       661 Feb 26 04:37 WUgKDmS0I76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmuUxKDmP2ru4m.diag
2025-02-25 20:38:01 (10492): Guest Log: -rw-r--r--. 1 atlas atlas     10962 Feb 26 04:37 runtime_log.err
2025-02-25 20:38:01 (10492): Guest Log: Looking for outputfile HITS.43401163._001781.pool.root.1
2025-02-25 20:38:01 (10492): Guest Log: HITS file was successfully produced
2025-02-25 20:38:01 (10492): Guest Log: -rw-------. 1 atlas atlas 184689028 Feb 26 04:37 /home/atlas/RunAtlas/HITS.43401163._001781.pool.root.1
2025-02-25 20:38:01 (10492): Guest Log: Successfully finished the ATLAS job!
2025-02-25 20:38:01 (10492): Guest Log: Copying the results back to the shared directory!
2025-02-25 20:38:01 (10492): Guest Log:  *** Contents of shared directory: ***
2025-02-25 20:38:01 (10492): Guest Log: total 427456
2025-02-25 20:38:01 (10492): Guest Log: -rwxrwxrwx. 1 root root 251817539 Feb 26 03:26 ATLAS.root_0
2025-02-25 20:38:01 (10492): Guest Log: -rwxrwxrwx. 1 root root 184689028 Feb 26  2025 HITS.pool.root.1
2025-02-25 20:38:01 (10492): Guest Log: -rwxrwxrwx. 1 root root      8900 Feb 26 03:26 init_data.xml
2025-02-25 20:38:01 (10492): Guest Log: -rwxrwxrwx. 1 root root    503554 Feb 26 02:11 input.tar.gz
2025-02-25 20:38:01 (10492): Guest Log: -rwxrwxrwx. 1 root root    665600 Feb 26  2025 result.tar.gz
2025-02-25 20:38:01 (10492): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 26 02:11 start_atlas.sh
2025-02-25 20:38:01 (10492): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-25 20:38:01 (10492): VM Completion File Detected.
2025-02-25 20:38:01 (10492): Powering off VM.
2025-02-25 20:38:03 (10492): Successfully stopped VM.
2025-02-25 20:38:03 (10492): Deregistering VM. (boinc_5f9aa1ffa3fee738, slot#5)
2025-02-25 20:38:03 (10492): Removing network bandwidth throttle group from VM.
2025-02-25 20:38:03 (10492): Removing VM from VirtualBox.
20:38:08 (10492): called boinc_finish(0)

</stderr_txt>
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