Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-25 21:51:50 (27788): Detected: vboxwrapper 26206
2025-02-25 21:51:50 (27788): Detected: BOINC client v7.20.2
2025-02-25 21:51:51 (27788): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2025-02-25 21:51:51 (27788): Successfully copied 'init_data.xml' to the shared directory.
2025-02-25 21:51:52 (27788): Create VM. (boinc_92ae630345c1b8cb, slot#5)
2025-02-25 21:51:52 (27788): Setting Memory Size for VM. (4800MB)
2025-02-25 21:51:53 (27788): Setting CPU Count for VM. (8)
2025-02-25 21:51:53 (27788): Setting Chipset Options for VM.
2025-02-25 21:51:53 (27788): Setting Graphics Controller Options for VM.
2025-02-25 21:51:53 (27788): Setting Boot Options for VM.
2025-02-25 21:51:54 (27788): Setting Network Configuration for NAT.
2025-02-25 21:51:54 (27788): Enabling VM Network Access.
2025-02-25 21:51:54 (27788): Disabling USB Support for VM.
2025-02-25 21:51:54 (27788): Disabling COM Port Support for VM.
2025-02-25 21:51:55 (27788): Disabling LPT Port Support for VM.
2025-02-25 21:51:55 (27788): Disabling Audio Support for VM.
2025-02-25 21:51:55 (27788): Disabling Clipboard Support for VM.
2025-02-25 21:51:55 (27788): Disabling Drag and Drop Support for VM.
2025-02-25 21:51:56 (27788): Adding storage controller(s) to VM.
2025-02-25 21:51:56 (27788): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-25 21:51:57 (27788): Adding VirtualBox Guest Additions to VM.
2025-02-25 21:51:57 (27788): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-25 21:51:58 (27788): forwarding host port 52046 to guest port 80
2025-02-25 21:51:58 (27788): Enabling remote desktop for VM.
2025-02-25 21:51:58 (27788): Required extension pack not installed, remote desktop not enabled.
2025-02-25 21:51:58 (27788): Enabling shared directory for VM.
2025-02-25 21:51:59 (27788): Starting VM using VBoxManage interface. (boinc_92ae630345c1b8cb, slot#5)
2025-02-25 21:52:02 (27788): Successfully started VM. (PID = '35512')
2025-02-25 21:52:02 (27788): Reporting VM Process ID to BOINC.
2025-02-25 21:52:02 (27788): Guest Log: BIOS: VirtualBox 6.0.14
2025-02-25 21:52:02 (27788): Guest Log: CPUID EDX: 0x178bfbff
2025-02-25 21:52:02 (27788): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-25 21:52:02 (27788): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-25 21:52:02 (27788): Detected: Web Application Enabled (http://localhost:52046)
2025-02-25 21:52:02 (27788): Preference change detected
2025-02-25 21:52:02 (27788): Setting CPU throttle for VM. (100%)
2025-02-25 21:52:03 (27788): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-25 21:52:05 (27788): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-25 21:52:05 (27788): Guest Log: BIOS: Booting from Hard Disk...
2025-02-25 21:52:08 (27788): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-25 21:52:08 (27788): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-25 21:52:08 (27788): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-25 21:52:16 (27788): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-25 21:52:16 (27788): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-25 21:52:21 (27788): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-25 21:52:21 (27788): Guest Log: 00:00:00.000111 main     Log opened 2025-02-25T21:52:17.997440000Z
2025-02-25 21:52:21 (27788): Guest Log: 00:00:00.000180 main     OS Product: Linux
2025-02-25 21:52:21 (27788): Guest Log: 00:00:00.000200 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-25 21:52:21 (27788): Guest Log: 00:00:00.000217 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-25 21:52:21 (27788): Guest Log: 00:00:00.000234 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-25 21:52:21 (27788): Guest Log: 00:00:00.000234 main     Process ID: 1364
2025-02-25 21:52:21 (27788): Guest Log: 00:00:00.000235 main     Package type: LINUX_64BITS_GENERIC
2025-02-25 21:52:21 (27788): Guest Log: 00:00:00.000800 main     5.2.32 r132073 started. Verbose level = 0
2025-02-25 21:52:21 (27788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-25 21:52:21 (27788): Guest Log: [INFO] Mounting shared directory
2025-02-25 21:52:21 (27788): Guest Log: [INFO] Checking for init_data.xml
2025-02-25 21:52:31 (27788): Guest Log: 00:00:10.010925 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 812 183 339 000ns (GuestNow=1 740 549 150 183 274 000 ns GuestLast=1 740 520 337 999 935 000 ns fSetTimeLastLoop=true )
2025-02-25 21:52:31 (27788): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-25 21:52:31 (27788): Guest Log: [INFO] Detected branch: prod
2025-02-25 21:52:31 (27788): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-25 21:52:31 (27788): Guest Log: Copying input files
2025-02-25 21:52:32 (27788): Guest Log: Copied input files into RunAtlas.
2025-02-25 21:52:32 (27788): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-25 21:52:32 (27788): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-25 21:52:32 (27788): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-25 21:52:32 (27788): Guest Log: Further information can be found at the LHC@home message board.
2025-02-25 21:52:51 (27788): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-25 21:52:52 (27788): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-25 21:52:52 (27788): Guest Log: 2.6.3.0 1648 0 30084 143064 3 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-25 21:52:52 (27788): Guest Log: copied the webapp to /var/www
2025-02-25 21:52:52 (27788): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-25 21:52:52 (27788): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-25 21:52:52 (27788): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-25 21:52:52 (27788): Guest Log:  *** Starting ATLAS job. (PandaID=6531236384 taskID=43205075) ***
2025-02-25 23:32:08 (27788): Status Report: Elapsed Time: '6000.000000'
2025-02-25 23:32:08 (27788): Status Report: CPU Time: '37331.890625'
2025-02-26 00:11:26 (27788): Guest Log:  *** Job finished ***
2025-02-26 00:11:26 (27788): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:11,006 | INFO     | [payload] validate_post thread has finished
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:11,995 | INFO     | [data] copytool_out thread has finished
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:12,803 | INFO     | [data] queue_monitor thread has finished
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:13,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995940083520)>', '<ExcThread(monitor, started 139994920380160)>']
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:13,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:13,773 | INFO     | [monitor] control thread has ended
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:18,691 | INFO     | all workflow threads have been joined
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:18,692 | INFO     | end of generic workflow (traces error code: 0)
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:18,692 | INFO     | traces error code: 0
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:18,692 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:18,790 [wrapper] ==== pilot stdout END ====
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:18,796 [wrapper] ==== wrapper stdout RESUME ====
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:18,800 [wrapper] pilotpid: 6010
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:18,804 [wrapper] Pilot exit status: 0
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:19,569 [wrapper] pandaids: 6531236384
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:19,592 [wrapper] cleanup supervisor_pilot  8789 6011
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:19,596 [wrapper] Test setup, not cleaning
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:19,605 [wrapper] apfmon messages muted
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:19,609 [wrapper] ==== wrapper stdout END ====
2025-02-26 00:11:26 (27788): Guest Log: 2025-02-26 08:11:19,613 [wrapper] ==== wrapper stderr END ====
2025-02-26 00:11:26 (27788): Guest Log:  *** Error codes and diagnostics ***
2025-02-26 00:11:26 (27788): Guest Log:     "exeErrorCode": 0,
2025-02-26 00:11:26 (27788): Guest Log:     "exeErrorDiag": "",
2025-02-26 00:11:26 (27788): Guest Log:     "pilotErrorCode": 0,
2025-02-26 00:11:26 (27788): Guest Log:     "pilotErrorDiag": "",
2025-02-26 00:11:26 (27788): Guest Log:  *** Listing of results directory ***
2025-02-26 00:11:26 (27788): Guest Log: total 324012
2025-02-26 00:11:26 (27788): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 23:54 pilot3.tar.gz
2025-02-26 00:11:26 (27788): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 26 00:38 runpilot2-wrapper.sh
2025-02-26 00:11:26 (27788): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 26 00:38 queuedata.json
2025-02-26 00:11:26 (27788): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Feb 26 05:52 start_atlas.sh
2025-02-26 00:11:26 (27788): Guest Log: -rwxr-xr-x. 1 atlas atlas    503555 Feb 26 05:52 input.tar.gz
2025-02-26 00:11:26 (27788): Guest Log: -rwxr-xr-x. 1 atlas atlas      8900 Feb 26 05:52 init_data.xml
2025-02-26 00:11:26 (27788): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 05:52 EVNT.43092757._000904.pool.root.1 -> /data/./ATLAS.root_0
2025-02-26 00:11:26 (27788): Guest Log: -rw-r--r--. 1 atlas atlas      2556 Feb 26 05:52 pandaJob.out
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas       424 Feb 26 05:52 setup.sh.local
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas    987490 Feb 26 05:53 agis_schedconf.cvmfs.json
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas   1573632 Feb 26 05:53 agis_ddmendpoints.agis.ALL.json
2025-02-26 00:11:26 (27788): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 05:53 pilot3
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas 326009700 Feb 26 08:10 HITS.43205075._060984.pool.root.1
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 08:10 pilot_heartbeat.json
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas      1040 Feb 26 08:10 memory_monitor_summary.json
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas    320602 Feb 26 08:11 log.43205075._060984.job.log.tgz.1
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas      7708 Feb 26 08:11 heartbeat.json
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas      4275 Feb 26 08:11 pilotlog.txt
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas    702178 Feb 26 08:11 log.43205075._060984.job.log.1
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 08:11 output.list
2025-02-26 00:11:26 (27788): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 08:11 runtime_log
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas   1044480 Feb 26 08:11 result.tar.gz
2025-02-26 00:11:26 (27788): Guest Log: -rw-r--r--. 1 atlas atlas     10962 Feb 26 08:11 runtime_log.err
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas       663 Feb 26 08:11 5Y7MDmdcK76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm1jgKDmd7ifOn.diag
2025-02-26 00:11:26 (27788): Guest Log: Looking for outputfile HITS.43205075._060984.pool.root.1
2025-02-26 00:11:26 (27788): Guest Log: HITS file was successfully produced
2025-02-26 00:11:26 (27788): Guest Log: -rw-------. 1 atlas atlas 326009700 Feb 26 08:10 /home/atlas/RunAtlas/HITS.43205075._060984.pool.root.1
2025-02-26 00:11:28 (27788): Guest Log: Successfully finished the ATLAS job!
2025-02-26 00:11:28 (27788): Guest Log: Copying the results back to the shared directory!
2025-02-26 00:11:28 (27788): Guest Log:  *** Contents of shared directory: ***
2025-02-26 00:11:28 (27788): Guest Log: total 655668
2025-02-26 00:11:28 (27788): Guest Log: -rwxrwxrwx. 1 root root 343808636 Feb 26 05:51 ATLAS.root_0
2025-02-26 00:11:28 (27788): Guest Log: -rwxrwxrwx. 1 root root 326009700 Feb 26  2025 HITS.pool.root.1
2025-02-26 00:11:28 (27788): Guest Log: -rwxrwxrwx. 1 root root      8900 Feb 26 05:51 init_data.xml
2025-02-26 00:11:28 (27788): Guest Log: -rwxrwxrwx. 1 root root    503555 Feb 26 02:12 input.tar.gz
2025-02-26 00:11:28 (27788): Guest Log: -rwxrwxrwx. 1 root root   1044480 Feb 26  2025 result.tar.gz
2025-02-26 00:11:28 (27788): Guest Log: -rwxrwxrwx. 1 root root     17569 Feb 26 02:12 start_atlas.sh
2025-02-26 00:11:28 (27788): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-26 00:11:28 (27788): VM Completion File Detected.
2025-02-26 00:11:28 (27788): Powering off VM.
2025-02-26 00:11:29 (27788): Successfully stopped VM.
2025-02-26 00:11:29 (27788): Deregistering VM. (boinc_92ae630345c1b8cb, slot#5)
2025-02-26 00:11:29 (27788): Removing network bandwidth throttle group from VM.
2025-02-26 00:11:30 (27788): Removing VM from VirtualBox.
00:11:35 (27788): called boinc_finish(0)

</stderr_txt>
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