Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:19:38 (91839): wrapper (7.7.26015): starting
21:19:38 (91839): wrapper: running run_atlas (--nthreads 8)
[2025-02-25 21:19:38] Arguments: --nthreads 8
[2025-02-25 21:19:38] Threads: 8
[2025-02-25 21:19:38] Checking for CVMFS
[2025-02-25 21:19:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 21:19:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 21:19:38] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 21:19:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 21:19:38] 2.11.2.0 29903 65 60680 143059 2 80 13768029 18432001 5706 130560 0 635046 99.125 1314026 69254 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 21:19:38] CVMFS is ok
[2025-02-25 21:19:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 21:19:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 21:19:38] Further information can be found at the LHC@home message board.
[2025-02-25 21:19:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 21:19:38] Checking for apptainer binary...
[2025-02-25 21:19:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 21:19:38] Running /usr/bin/apptainer --version
[2025-02-25 21:19:38] apptainer version 1.3.2-1.el7
[2025-02-25 21:19:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 21:19:39] c-212-18.aglt2.org
[2025-02-25 21:19:39] apptainer works
[2025-02-25 21:19:39] Set ATHENA_PROC_NUMBER=8
[2025-02-25 21:19:39] Set ATHENA_CORE_NUMBER=8
[2025-02-25 21:19:39] Starting ATLAS job with PandaID=6531224958
[2025-02-25 21:19:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 23:41:27]  *** The last 200 lines of the pilot log: ***
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | sum of deviations: 11836751283.000002
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | mean x: 1740540924.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | mean y: 2550312.426356589
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | -- intersect: -30949919231.52061
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | intersect: -30949919231.52061
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | chi2: 0.49522139694037076
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | current chi2=0.49522139694037076 (change=77.51842822063135 %)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | model: linear, x: [1740537325.0, 1740537386.0, 1740537447.0, 1740537508.0, 1740537569.0, 1740537630.0, 1740537691.0, 1740537752.0, 1740537813.0, 1740537874.0, 1740
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | sum of square deviations: 591173875.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,035 | INFO     | sum of deviations: -573533071.5000001
[2025-02-25 23:41:27] 2025-02-26 04:41:14,036 | INFO     | mean x: 1740541076.5
[2025-02-25 23:41:27] 2025-02-26 04:41:14,036 | INFO     | mean y: 2575334.5887096776
[2025-02-25 23:41:27] 2025-02-26 04:41:14,036 | INFO     | -- intersect: 1691178149.9227967
[2025-02-25 23:41:27] 2025-02-26 04:41:14,036 | INFO     | intersect: 1691178149.9227967
[2025-02-25 23:41:27] 2025-02-26 04:41:14,036 | INFO     | chi2: 0.0033917261952437893
[2025-02-25 23:41:27] 2025-02-26 04:41:14,036 | INFO     | current chi2=0.0033917261952437893 (change=99.31510911761913 %)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,036 | INFO     | model: linear, x: [1740537630.0, 1740537691.0, 1740537752.0, 1740537813.0, 1740537874.0, 1740537935.0, 1740537996.0, 1740538057.0, 1740538118.0, 1740538179.0, 1740
[2025-02-25 23:41:27] 2025-02-26 04:41:14,036 | INFO     | sum of square deviations: 522502820.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | sum of deviations: -1039269138.9999999
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | mean x: 1740541229.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | mean y: 2576350.8151260503
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | -- intersect: 3464549598.073067
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | intersect: 3464549598.073067
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | chi2: 0.0024077630638327957
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | current chi2=0.0024077630638327957 (change=29.010688798842406 %)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | model: linear, x: [1740537935.0, 1740537996.0, 1740538057.0, 1740538118.0, 1740538179.0, 1740538240.0, 1740538301.0, 1740538362.0, 1740538423.0, 1740538484.0, 1740
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | sum of square deviations: 459366752.5
[2025-02-25 23:41:27] 2025-02-26 04:41:14,037 | INFO     | sum of deviations: -920216415.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | mean x: 1740541381.5
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | mean y: 2576062.1578947366
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | -- intersect: 3489277573.5892806
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | intersect: 3489277573.5892806
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | chi2: 0.0024060448587103446
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | current chi2=0.0024060448587103446 (change=0.07136105492522858 %)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | left removable region: 50
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | model: linear, x: [1740539460.0, 1740539521.0, 1740539582.0, 1740539643.0, 1740539704.0, 1740539765.0, 1740539826.0, 1740539887.0, 1740539948.0, 1740540009.0, 1740
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | sum of square deviations: 177275882.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | sum of deviations: 565678864.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | mean x: 1740541961.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | mean y: 2570717.0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,038 | INFO     | -- intersect: -5551415466.201234
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | intersect: -5551415466.201234
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | chi2: 3.1229316545214976e-05
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | -- intersect: -5551415466.201234
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | current memory leak: 3.19 B/s (using 83 data points, chi2=0.00)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | ..............................
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | . Timing measurements:
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | . get job = 0 s
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | . initial setup = 2 s
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | . payload setup = 4 s
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | . stage-in = 0 s
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | . payload execution = 8457 s
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | . stage-out = 0 s
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | . log creation = 0 s
[2025-02-25 23:41:27] 2025-02-26 04:41:14,039 | INFO     | ..............................
[2025-02-25 23:41:27] 2025-02-26 04:41:14,214 | WARNING  | process 10697 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 23:41:27] 2025-02-26 04:41:14,214 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6531224958/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,214 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6531224958/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,215 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3062875 B
[2025-02-25 23:41:27] 2025-02-26 04:41:14,215 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16986 B
[2025-02-25 23:41:27] 2025-02-26 04:41:14,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-02-25 23:41:27] 2025-02-26 04:41:14,255 | INFO     | sufficient remaining disk space (105551757312 B)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,255 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,256 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6531224958: 3396725 B (within 2537553920 B limit)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,256 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6531224958/HITS.43205075._060983.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,256 | INFO     | total size of present files: 0 B (workdir size: 3396725 B)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,256 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6531224958/HITS.43205075._060983.pool.root.1 since it does not exist
[2025-02-25 23:41:27] 2025-02-26 04:41:14,448 | INFO     | number of running child processes to parent process 10697: 1
[2025-02-25 23:41:27] 2025-02-26 04:41:14,448 | INFO     | maximum number of monitored processes: 6
[2025-02-25 23:41:27] 2025-02-26 04:41:14,448 | INFO     | aborting job monitoring since job object (job id=6531224958) has expired
[2025-02-25 23:41:27] 2025-02-26 04:41:14,468 | INFO     | 
[2025-02-25 23:41:27] 2025-02-26 04:41:14,468 | INFO     | job summary report
[2025-02-25 23:41:27] 2025-02-26 04:41:14,468 | INFO     | --------------------------------------------------
[2025-02-25 23:41:27] 2025-02-26 04:41:14,468 | INFO     | PanDA job id: 6531224958
[2025-02-25 23:41:27] 2025-02-26 04:41:14,468 | INFO     | task id: 43205075
[2025-02-25 23:41:27] 2025-02-26 04:41:14,468 | INFO     | errors: (none)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 23:41:27] 2025-02-26 04:41:14,468 | INFO     | pilot state: finished 
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | transexitcode: 0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | exeerrorcode: 0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | exeerrordiag: 
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | exitcode: 0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | exitmsg: OK
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | cpuconsumptiontime: 58521 s
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | nevents: 400
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | neventsw: 0
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | pid: 10697
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | pgrp: 10697
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | corecount: 8
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | event service: False
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | sizes: {0: 2370345, 3: 2370551, 11: 2370579, 8465: 2398408, 8467: 2407349, 8469: 2407405, 8472: 2407703}
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | --------------------------------------------------
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | 
[2025-02-25 23:41:27] 2025-02-26 04:41:14,469 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-02-25 23:41:27] 2025-02-26 04:41:14,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,480 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 23:41:27] 2025-02-26 04:41:14,481 | INFO     | job 6531224958 has completed (purged errors)
[2025-02-25 23:41:27] 2025-02-26 04:41:14,482 | INFO     | overall cleanup function is called
[2025-02-25 23:41:27] 2025-02-26 04:41:15,488 | INFO     | --- collectZombieJob: --- 10, [10697]
[2025-02-25 23:41:27] 2025-02-26 04:41:15,488 | INFO     | zombie collector waiting for pid 10697
[2025-02-25 23:41:27] 2025-02-26 04:41:15,489 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 23:41:27] 2025-02-26 04:41:15,489 | INFO     | collected zombie processes
[2025-02-25 23:41:27] 2025-02-26 04:41:15,489 | INFO     | will attempt to kill all subprocesses of pid=10697
[2025-02-25 23:41:27] 2025-02-26 04:41:15,667 | INFO     | process IDs to be killed: [10697] (in reverse order)
[2025-02-25 23:41:27] 2025-02-26 04:41:15,752 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 23:41:27] 2025-02-26 04:41:15,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 23:41:27] 2025-02-26 04:41:15,762 | INFO     | did not find any defunct processes belonging to 10697
[2025-02-25 23:41:27] 2025-02-26 04:41:15,769 | INFO     | did not find any defunct processes belonging to 10697
[2025-02-25 23:41:27] 2025-02-26 04:41:15,769 | INFO     | ready for new job
[2025-02-25 23:41:27] 2025-02-26 04:41:15,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 23:41:27] 2025-02-26 04:41:15,769 | INFO     | **************************************
[2025-02-25 23:41:27] 2025-02-26 04:41:15,770 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 23:41:27] 2025-02-26 04:41:15,770 | INFO     | **************************************
[2025-02-25 23:41:27] 2025-02-26 04:41:15,770 | INFO     | 
[2025-02-25 23:41:27] 2025-02-26 04:41:15,772 | INFO     | architecture information:
[2025-02-25 23:41:27] 2025-02-26 04:41:15,772 | INFO     | executing command: cat /etc/os-release
[2025-02-25 23:41:27] 2025-02-26 04:41:15,782 | INFO     | cat /etc/os-release:
[2025-02-25 23:41:27] NAME="CentOS Linux"
[2025-02-25 23:41:27] VERSION="7 (Core)"
[2025-02-25 23:41:27] ID="centos"
[2025-02-25 23:41:27] ID_LIKE="rhel fedora"
[2025-02-25 23:41:27] VERSION_ID="7"
[2025-02-25 23:41:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 23:41:27] ANSI_COLOR="0;31"
[2025-02-25 23:41:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 23:41:27] HOME_URL="https://www.centos.org/"
[2025-02-25 23:41:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 23:41:27] 
[2025-02-25 23:41:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 23:41:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 23:41:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 23:41:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 23:41:27] 
[2025-02-25 23:41:27] 2025-02-26 04:41:15,782 | INFO     | **************************************
[2025-02-25 23:41:27] 2025-02-26 04:41:16,285 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-02-25 23:41:27] 2025-02-26 04:41:16,294 | INFO     | sufficient remaining disk space (105555951616 B)
[2025-02-25 23:41:27] 2025-02-26 04:41:16,294 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 23:41:27] 2025-02-26 04:41:16,294 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 23:41:27] 2025-02-26 04:41:16,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:41:27] 2025-02-26 04:41:16,294 | INFO     | aborting loop
[2025-02-25 23:41:27] 2025-02-26 04:41:16,518 | INFO     | all payload control threads have been joined
[2025-02-25 23:41:27] 2025-02-26 04:41:16,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 23:41:27] 2025-02-26 04:41:16,728 | INFO     | all data control threads have been joined
[2025-02-25 23:41:27] 2025-02-26 04:41:17,046 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 23:41:27] 2025-02-26 04:41:17,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 23:41:27] 2025-02-26 04:41:17,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 23:41:27] 2025-02-26 04:41:17,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 23:41:27] 2025-02-26 04:41:17,295 | INFO     | [job] retrieve thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:17,298 | INFO     | [job] job monitor thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:17,519 | INFO     | [payload] control thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:17,733 | INFO     | [data] control thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:17,758 | INFO     | all job control threads have been joined
[2025-02-25 23:41:27] 2025-02-26 04:41:17,767 | INFO     | [job] validate thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:17,801 | INFO     | [data] copytool_in thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:17,815 | INFO     | [payload] validate_post thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:17,820 | INFO     | [payload] failed_post thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:17,956 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:18,233 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:18,689 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:18,763 | INFO     | [job] control thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:18,771 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:19,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 23:41:27] 2025-02-26 04:41:19,247 | INFO     | [data] copytool_out thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:20,109 | INFO     | [job] queue monitor thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:20,614 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 23:41:27] 2025-02-26 04:41:22,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140541929891648)>', '<ExcThread(monitor, started 140541052315392)>']
[2025-02-25 23:41:27] 2025-02-26 04:41:23,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 23:41:27] 2025-02-26 04:41:23,069 | INFO     | [monitor] control thread has ended
[2025-02-25 23:41:27] 2025-02-26 04:41:27,159 | INFO     | all workflow threads have been joined
[2025-02-25 23:41:27] 2025-02-26 04:41:27,160 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 23:41:27] 2025-02-26 04:41:27,160 | INFO     | traces error code: 0
[2025-02-25 23:41:27] 2025-02-26 04:41:27,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 23:41:27] 2025-02-26 04:41:27,247 [wrapper] ==== pilot stdout END ====
[2025-02-25 23:41:27] 2025-02-26 04:41:27,249 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 23:41:27] 2025-02-26 04:41:27,251 [wrapper] pilotpid: 96306
[2025-02-25 23:41:27] 2025-02-26 04:41:27,252 [wrapper] Pilot exit status: 0
[2025-02-25 23:41:27] 2025-02-26 04:41:27,259 [wrapper] pandaids: 6531224958
[2025-02-25 23:41:27] 2025-02-26 04:41:27,318 [wrapper] cleanup supervisor_pilot 19040 96307
[2025-02-25 23:41:27] 2025-02-26 04:41:27,320 [wrapper] Test setup, not cleaning
[2025-02-25 23:41:27] 2025-02-26 04:41:27,323 [wrapper] apfmon messages muted
[2025-02-25 23:41:27] 2025-02-26 04:41:27,325 [wrapper] ==== wrapper stdout END ====
[2025-02-25 23:41:27] 2025-02-26 04:41:27,326 [wrapper] ==== wrapper stderr END ====
[2025-02-25 23:41:27]  *** Error codes and diagnostics ***
[2025-02-25 23:41:27]     "exeErrorCode": 0,
[2025-02-25 23:41:27]     "exeErrorDiag": "",
[2025-02-25 23:41:27]     "pilotErrorCode": 0,
[2025-02-25 23:41:27]     "pilotErrorDiag": "",
[2025-02-25 23:41:27]  *** Listing of results directory ***
[2025-02-25 23:41:27] total 664772
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 18:54 pilot3.tar.gz
[2025-02-25 23:41:27] -rwx------ 1 boincer umatlas     35865 Feb 25 19:33 runpilot2-wrapper.sh
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 19:33 queuedata.json
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas       100 Feb 25 21:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 23:41:27] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 21:19 run_atlas
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas       105 Feb 25 21:19 job.xml
[2025-02-25 23:41:27] -rw-r--r-- 2 boincer umatlas 344687696 Feb 25 21:19 EVNT.43092757._000908.pool.root.1
[2025-02-25 23:41:27] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 21:19 start_atlas.sh
[2025-02-25 23:41:27] drwxrwx--x 2 boincer umatlas      4096 Feb 25 21:19 shared
[2025-02-25 23:41:27] -rw-r--r-- 2 boincer umatlas    503551 Feb 25 21:19 input.tar.gz
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas         0 Feb 25 21:19 boinc_lockfile
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas      2556 Feb 25 21:19 pandaJob.out
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas       424 Feb 25 21:19 setup.sh.local
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas    987482 Feb 25 21:19 agis_schedconf.cvmfs.json
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas   1573632 Feb 25 21:19 agis_ddmendpoints.agis.ALL.json
[2025-02-25 23:41:27] drwx------ 4 boincer umatlas      4096 Feb 25 21:19 pilot3
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas      6300 Feb 25 23:37 init_data.xml
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas        95 Feb 25 23:40 pilot_heartbeat.json
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas       530 Feb 25 23:40 boinc_task_state.xml
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas 329872487 Feb 25 23:40 HITS.43205075._060983.pool.root.1
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas      1073 Feb 25 23:41 memory_monitor_summary.json
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas    341416 Feb 25 23:41 log.43205075._060983.job.log.tgz.1
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas      7735 Feb 25 23:41 heartbeat.json
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas        27 Feb 25 23:41 wrapper_checkpoint.txt
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 23:41 boinc_mmap_file
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas      4216 Feb 25 23:41 pilotlog.txt
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas    840453 Feb 25 23:41 log.43205075._060983.job.log.1
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas       357 Feb 25 23:41 output.list
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas       620 Feb 25 23:41 runtime_log
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas   1198080 Feb 25 23:41 result.tar.gz
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas     11013 Feb 25 23:41 runtime_log.err
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas       660 Feb 25 23:41 466LDmbXK76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmMaxKDm2d50Ym.diag
[2025-02-25 23:41:27] -rw-r--r-- 1 boincer umatlas     21974 Feb 25 23:41 stderr.txt
[2025-02-25 23:41:27] HITS file was successfully produced:
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas 329872487 Feb 25 23:40 shared/HITS.pool.root.1
[2025-02-25 23:41:27]  *** Contents of shared directory: ***
[2025-02-25 23:41:27] total 660448
[2025-02-25 23:41:27] -rw-r--r-- 2 boincer umatlas 344687696 Feb 25 21:19 ATLAS.root_0
[2025-02-25 23:41:27] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 21:19 start_atlas.sh
[2025-02-25 23:41:27] -rw-r--r-- 2 boincer umatlas    503551 Feb 25 21:19 input.tar.gz
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas 329872487 Feb 25 23:40 HITS.pool.root.1
[2025-02-25 23:41:27] -rw------- 1 boincer umatlas   1198080 Feb 25 23:41 result.tar.gz
23:41:29 (91839): run_atlas exited; CPU time 58087.054790
23:41:29 (91839): called boinc_finish(0)

</stderr_txt>
]]>

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