Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:37:37 (3055275): wrapper (7.7.26015): starting
21:37:37 (3055275): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 21:37:37] Arguments: --nthreads 9
[2025-02-25 21:37:37] Threads: 9
[2025-02-25 21:37:37] Checking for CVMFS
[2025-02-25 21:37:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 21:37:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 21:37:38] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 21:37:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 21:37:38] 2.11.5.0 2130797 31112 336064 143059 0 64 25972518 37641216 18257 130560 0 3716627 98.824 9233765 17698 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 21:37:38] CVMFS is ok
[2025-02-25 21:37:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 21:37:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 21:37:38] Further information can be found at the LHC@home message board.
[2025-02-25 21:37:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 21:37:38] Checking for apptainer binary...
[2025-02-25 21:37:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 21:37:38] Running /usr/bin/apptainer --version
[2025-02-25 21:37:38] apptainer version 1.3.6-1.el9
[2025-02-25 21:37:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 21:37:38] c6-1-26-1.aglt2.org
[2025-02-25 21:37:38] apptainer works
[2025-02-25 21:37:38] Set ATHENA_PROC_NUMBER=9
[2025-02-25 21:37:38] Set ATHENA_CORE_NUMBER=9
[2025-02-25 21:37:39] Starting ATLAS job with PandaID=6531060268
[2025-02-25 21:37:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 00:08:16]  *** The last 200 lines of the pilot log: ***
[2025-02-26 00:08:16] 2025-02-26 05:07:55,631 | INFO     | model: linear, x: [1740538166.0, 1740538227.0, 1740538288.0, 1740538349.0, 1740538410.0, 1740538471.0, 1740538532.0, 1740538593.0, 1740538654.0, 1740538715.0, 1740
[2025-02-26 00:08:16] 2025-02-26 05:07:55,631 | INFO     | sum of square deviations: 797285374.9343061
[2025-02-26 00:08:16] 2025-02-26 05:07:55,631 | INFO     | sum of deviations: 340743282.0875883
[2025-02-26 00:08:16] 2025-02-26 05:07:55,631 | INFO     | mean x: 1740542314.0218978
[2025-02-26 00:08:16] 2025-02-26 05:07:55,632 | INFO     | mean y: 2177905.97080292
[2025-02-26 00:08:16] 2025-02-26 05:07:55,632 | INFO     | -- intersect: -741693886.1601076
[2025-02-26 00:08:16] 2025-02-26 05:07:55,632 | INFO     | intersect: -741693886.1601076
[2025-02-26 00:08:16] 2025-02-26 05:07:55,632 | INFO     | chi2: 1.601947659315797
[2025-02-26 00:08:16] 2025-02-26 05:07:55,632 | INFO     | current chi2=1.601947659315797 (change=34.98165354195917 %)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,632 | INFO     | model: linear, x: [1740538471.0, 1740538532.0, 1740538593.0, 1740538654.0, 1740538715.0, 1740538776.0, 1740538837.0, 1740538898.0, 1740538959.0, 1740539020.0, 1740
[2025-02-26 00:08:16] 2025-02-26 05:07:55,632 | INFO     | sum of square deviations: 713134044.9318188
[2025-02-26 00:08:16] 2025-02-26 05:07:55,633 | INFO     | sum of deviations: -14143241761.818169
[2025-02-26 00:08:16] 2025-02-26 05:07:55,633 | INFO     | mean x: 1740542466.5227273
[2025-02-26 00:08:16] 2025-02-26 05:07:55,633 | INFO     | mean y: 2204009.272727273
[2025-02-26 00:08:16] 2025-02-26 05:07:55,633 | INFO     | -- intersect: 34521538874.42533
[2025-02-26 00:08:16] 2025-02-26 05:07:55,633 | INFO     | intersect: 34521538874.42533
[2025-02-26 00:08:16] 2025-02-26 05:07:55,633 | INFO     | chi2: 0.9930593951829603
[2025-02-26 00:08:16] 2025-02-26 05:07:55,633 | INFO     | current chi2=0.9930593951829603 (change=38.00924834166537 %)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,633 | INFO     | model: linear, x: [1740538776.0, 1740538837.0, 1740538898.0, 1740538959.0, 1740539020.0, 1740539081.0, 1740539142.0, 1740539203.0, 1740539264.0, 1740539325.0, 1740
[2025-02-26 00:08:16] 2025-02-26 05:07:55,634 | INFO     | sum of square deviations: 635122364.9291354
[2025-02-26 00:08:16] 2025-02-26 05:07:55,634 | INFO     | sum of deviations: -12018227771.149609
[2025-02-26 00:08:16] 2025-02-26 05:07:55,634 | INFO     | mean x: 1740542619.023622
[2025-02-26 00:08:16] 2025-02-26 05:07:55,634 | INFO     | mean y: 2199679.716535433
[2025-02-26 00:08:16] 2025-02-26 05:07:55,634 | INFO     | -- intersect: 32937959457.524303
[2025-02-26 00:08:16] 2025-02-26 05:07:55,634 | INFO     | intersect: 32937959457.524303
[2025-02-26 00:08:16] 2025-02-26 05:07:55,634 | INFO     | chi2: 0.9416110178252843
[2025-02-26 00:08:16] 2025-02-26 05:07:55,634 | INFO     | current chi2=0.9416110178252843 (change=5.180795590599809 %)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,635 | INFO     | left removable region: 40
[2025-02-26 00:08:16] 2025-02-26 05:07:55,635 | INFO     | model: linear, x: [1740539996.0, 1740540057.0, 1740540118.0, 1740540179.0, 1740540241.0, 1740540301.0, 1740540362.0, 1740540423.0, 1740540484.0, 1740540545.0, 1740
[2025-02-26 00:08:16] 2025-02-26 05:07:55,635 | INFO     | sum of square deviations: 319444801.96039516
[2025-02-26 00:08:16] 2025-02-26 05:07:55,635 | INFO     | sum of deviations: 194773838.66336682
[2025-02-26 00:08:16] 2025-02-26 05:07:55,635 | INFO     | mean x: 1740543046.019802
[2025-02-26 00:08:16] 2025-02-26 05:07:55,635 | INFO     | mean y: 2204022.168316832
[2025-02-26 00:08:16] 2025-02-26 05:07:55,635 | INFO     | -- intersect: -1059050530.5795373
[2025-02-26 00:08:16] 2025-02-26 05:07:55,635 | INFO     | intersect: -1059050530.5795373
[2025-02-26 00:08:16] 2025-02-26 05:07:55,636 | INFO     | chi2: 0.030360442401479025
[2025-02-26 00:08:16] 2025-02-26 05:07:55,636 | INFO     | -- intersect: -1059050530.5795373
[2025-02-26 00:08:16] 2025-02-26 05:07:55,636 | INFO     | current memory leak: 0.61 B/s (using 101 data points, chi2=0.03)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,636 | INFO     | ..............................
[2025-02-26 00:08:16] 2025-02-26 05:07:55,636 | INFO     | . Timing measurements:
[2025-02-26 00:08:16] 2025-02-26 05:07:55,636 | INFO     | . get job = 0 s
[2025-02-26 00:08:16] 2025-02-26 05:07:55,636 | INFO     | . initial setup = 3 s
[2025-02-26 00:08:16] 2025-02-26 05:07:55,637 | INFO     | . payload setup = 18 s
[2025-02-26 00:08:16] 2025-02-26 05:07:55,637 | INFO     | . stage-in = 0 s
[2025-02-26 00:08:16] 2025-02-26 05:07:55,637 | INFO     | . payload execution = 8918 s
[2025-02-26 00:08:16] 2025-02-26 05:07:55,637 | INFO     | . stage-out = 0 s
[2025-02-26 00:08:16] 2025-02-26 05:07:55,637 | INFO     | . log creation = 0 s
[2025-02-26 00:08:16] 2025-02-26 05:07:55,637 | INFO     | ..............................
[2025-02-26 00:08:16] 2025-02-26 05:07:55,769 | WARNING  | process 3068253 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 00:08:16] 2025-02-26 05:07:55,770 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6531060268/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,770 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6531060268/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,772 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3960319 B
[2025-02-26 00:08:16] 2025-02-26 05:07:55,772 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15532 B
[2025-02-26 00:08:16] 2025-02-26 05:07:55,773 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-02-26 00:08:16] 2025-02-26 05:07:55,790 | INFO     | sufficient remaining disk space (74922852352 B)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,790 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,792 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6531060268: 4286838 B (within 2537553920 B limit)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,793 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6531060268/HITS.43401155._000799.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,793 | INFO     | total size of present files: 0 B (workdir size: 4286838 B)
[2025-02-26 00:08:16] 2025-02-26 05:07:55,793 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6531060268/HITS.43401155._000799.pool.root.1 since it does not exist
[2025-02-26 00:08:16] 2025-02-26 05:07:55,910 | INFO     | number of running child processes to parent process 3068253: 1
[2025-02-26 00:08:16] 2025-02-26 05:07:55,910 | INFO     | maximum number of monitored processes: 6
[2025-02-26 00:08:16] 2025-02-26 05:07:55,911 | INFO     | aborting job monitoring since job object (job id=6531060268) has expired
[2025-02-26 00:08:16] 2025-02-26 05:07:55,942 | INFO     | PID=3060929 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-26 00:08:16] 2025-02-26 05:07:55,942 | INFO     | .. there are 23 such processes running
[2025-02-26 00:08:16] 2025-02-26 05:07:56,188 | INFO     | 
[2025-02-26 00:08:16] 2025-02-26 05:07:56,188 | INFO     | job summary report
[2025-02-26 00:08:16] 2025-02-26 05:07:56,188 | INFO     | --------------------------------------------------
[2025-02-26 00:08:16] 2025-02-26 05:07:56,188 | INFO     | PanDA job id: 6531060268
[2025-02-26 00:08:16] 2025-02-26 05:07:56,188 | INFO     | task id: 43401155
[2025-02-26 00:08:16] 2025-02-26 05:07:56,188 | INFO     | errors: (none)
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | pilot state: finished 
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | transexitcode: 0
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | exeerrorcode: 0
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | exeerrordiag: 
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | exitcode: 0
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | exitmsg: OK
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | cpuconsumptiontime: 40633 s
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | nevents: 400
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | neventsw: 0
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | pid: 3068253
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | pgrp: 3068253
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | corecount: 9
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | event service: False
[2025-02-26 00:08:16] 2025-02-26 05:07:56,189 | INFO     | sizes: {0: 2370206, 1: 2370405, 12: 2370405, 14: 2370639, 22: 2370667, 8940: 2398687, 8942: 2407628, 8944: 2407684, 8948: 2407854}
[2025-02-26 00:08:16] 2025-02-26 05:07:56,190 | INFO     | --------------------------------------------------
[2025-02-26 00:08:16] 2025-02-26 05:07:56,190 | INFO     | 
[2025-02-26 00:08:16] 2025-02-26 05:07:56,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-02-26 00:08:16] 2025-02-26 05:07:56,212 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,214 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 00:08:16] 2025-02-26 05:07:56,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 00:08:16] 2025-02-26 05:07:56,214 | INFO     | job 6531060268 has completed (purged errors)
[2025-02-26 00:08:16] 2025-02-26 05:07:56,214 | INFO     | overall cleanup function is called
[2025-02-26 00:08:16] 2025-02-26 05:07:57,223 | INFO     | --- collectZombieJob: --- 10, [3068253]
[2025-02-26 00:08:16] 2025-02-26 05:07:57,223 | INFO     | zombie collector waiting for pid 3068253
[2025-02-26 00:08:16] 2025-02-26 05:07:57,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 00:08:16] 2025-02-26 05:07:57,223 | INFO     | collected zombie processes
[2025-02-26 00:08:16] 2025-02-26 05:07:57,223 | INFO     | will attempt to kill all subprocesses of pid=3068253
[2025-02-26 00:08:16] 2025-02-26 05:07:57,373 | INFO     | process IDs to be killed: [3068253] (in reverse order)
[2025-02-26 00:08:16] 2025-02-26 05:07:57,474 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 00:08:16] 2025-02-26 05:07:57,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 00:08:16] 2025-02-26 05:07:57,486 | INFO     | did not find any defunct processes belonging to 3068253
[2025-02-26 00:08:16] 2025-02-26 05:07:57,498 | INFO     | did not find any defunct processes belonging to 3068253
[2025-02-26 00:08:16] 2025-02-26 05:07:57,499 | INFO     | ready for new job
[2025-02-26 00:08:16] 2025-02-26 05:07:57,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 00:08:16] 2025-02-26 05:07:57,501 | INFO     | **************************************
[2025-02-26 00:08:16] 2025-02-26 05:07:57,501 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 00:08:16] 2025-02-26 05:07:57,501 | INFO     | **************************************
[2025-02-26 00:08:16] 2025-02-26 05:07:57,501 | INFO     | 
[2025-02-26 00:08:16] 2025-02-26 05:07:57,516 | INFO     | architecture information:
[2025-02-26 00:08:16] 2025-02-26 05:07:57,516 | INFO     | executing command: cat /etc/os-release
[2025-02-26 00:08:16] 2025-02-26 05:07:57,532 | INFO     | cat /etc/os-release:
[2025-02-26 00:08:16] NAME="CentOS Linux"
[2025-02-26 00:08:16] VERSION="7 (Core)"
[2025-02-26 00:08:16] ID="centos"
[2025-02-26 00:08:16] ID_LIKE="rhel fedora"
[2025-02-26 00:08:16] VERSION_ID="7"
[2025-02-26 00:08:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 00:08:16] ANSI_COLOR="0;31"
[2025-02-26 00:08:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 00:08:16] HOME_URL="https://www.centos.org/"
[2025-02-26 00:08:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 00:08:16] 
[2025-02-26 00:08:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 00:08:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 00:08:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 00:08:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 00:08:16] 
[2025-02-26 00:08:16] 2025-02-26 05:07:57,533 | INFO     | **************************************
[2025-02-26 00:08:16] 2025-02-26 05:07:58,035 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-02-26 00:08:16] 2025-02-26 05:07:58,053 | INFO     | sufficient remaining disk space (74928095232 B)
[2025-02-26 00:08:16] 2025-02-26 05:07:58,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 00:08:16] 2025-02-26 05:07:58,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 00:08:16] 2025-02-26 05:07:58,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 00:08:16] 2025-02-26 05:07:58,054 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 00:08:16] 2025-02-26 05:07:58,054 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 00:08:16] 2025-02-26 05:07:58,054 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 00:08:16] 2025-02-26 05:07:58,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 00:08:16] 2025-02-26 05:07:58,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 00:08:16] 2025-02-26 05:07:58,413 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 00:08:16] 2025-02-26 05:07:58,413 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 00:08:16] 2025-02-26 05:07:58,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 00:08:16] 2025-02-26 05:07:58,414 | INFO     | will abort loop
[2025-02-26 00:08:16] 2025-02-26 05:07:58,610 | INFO     | all job control threads have been joined
[2025-02-26 00:08:16] 2025-02-26 05:07:58,684 | INFO     | all payload control threads have been joined
[2025-02-26 00:08:16] 2025-02-26 05:07:59,013 | INFO     | all data control threads have been joined
[2025-02-26 00:08:16] 2025-02-26 05:07:59,058 | INFO     | [job] retrieve thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,234 | INFO     | [job] validate thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,282 | INFO     | [payload] failed_post thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,419 | INFO     | [job] job monitor thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,615 | INFO     | [job] control thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,627 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,640 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,689 | INFO     | [payload] control thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,740 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:07:59,769 | INFO     | [data] copytool_in thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:08:00,018 | INFO     | [data] control thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:08:00,059 | INFO     | [data] copytool_out thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:08:00,428 | INFO     | [payload] validate_post thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:08:00,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 00:08:16] 2025-02-26 05:08:01,703 | INFO     | [job] queue monitor thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:08:02,060 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:08:07,132 [wrapper] supervise_pilot (15 min periods counter: 11)
[2025-02-26 00:08:16] 2025-02-26 05:08:08,642 | INFO     | job.realtimelogging is not enabled
[2025-02-26 00:08:16] 2025-02-26 05:08:09,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 00:08:16] 2025-02-26 05:08:10,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701083719488)>', '<ExcThread(monitor, started 140700746233600)>']
[2025-02-26 00:08:16] 2025-02-26 05:08:11,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 00:08:16] 2025-02-26 05:08:11,120 | INFO     | [monitor] control thread has ended
[2025-02-26 00:08:16] 2025-02-26 05:08:15,700 | INFO     | all workflow threads have been joined
[2025-02-26 00:08:16] 2025-02-26 05:08:15,700 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 00:08:16] 2025-02-26 05:08:15,700 | INFO     | traces error code: 0
[2025-02-26 00:08:16] 2025-02-26 05:08:15,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 00:08:16] 2025-02-26 05:08:15,856 [wrapper] ==== pilot stdout END ====
[2025-02-26 00:08:16] 2025-02-26 05:08:15,859 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 00:08:16] 2025-02-26 05:08:15,861 [wrapper] pilotpid: 3060929
[2025-02-26 00:08:16] 2025-02-26 05:08:15,864 [wrapper] Pilot exit status: 0
[2025-02-26 00:08:16] 2025-02-26 05:08:15,874 [wrapper] pandaids: 6531060268
[2025-02-26 00:08:16] 2025-02-26 05:08:15,942 [wrapper] cleanup supervisor_pilot 3613317 3060930
[2025-02-26 00:08:16] 2025-02-26 05:08:15,945 [wrapper] Test setup, not cleaning
[2025-02-26 00:08:16] 2025-02-26 05:08:15,950 [wrapper] apfmon messages muted
[2025-02-26 00:08:16] 2025-02-26 05:08:15,953 [wrapper] ==== wrapper stdout END ====
[2025-02-26 00:08:16] 2025-02-26 05:08:15,956 [wrapper] ==== wrapper stderr END ====
[2025-02-26 00:08:16]  *** Error codes and diagnostics ***
[2025-02-26 00:08:16]     "exeErrorCode": 0,
[2025-02-26 00:08:16]     "exeErrorDiag": "",
[2025-02-26 00:08:16]     "pilotErrorCode": 0,
[2025-02-26 00:08:16]     "pilotErrorDiag": "",
[2025-02-26 00:08:16]  *** Listing of results directory ***
[2025-02-26 00:08:16] total 434708
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 17:04 pilot3.tar.gz
[2025-02-26 00:08:16] -rwx------. 1 boincer umatlas     35865 Feb 25 17:24 runpilot2-wrapper.sh
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 17:24 queuedata.json
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas       100 Feb 25 21:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 00:08:16] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 21:37 run_atlas
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas       105 Feb 25 21:37 job.xml
[2025-02-26 00:08:16] -rw-r--r--. 2 boincer umatlas 253152002 Feb 25 21:37 EVNT.43401153._000032.pool.root.1
[2025-02-26 00:08:16] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 21:37 start_atlas.sh
[2025-02-26 00:08:16] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 21:37 shared
[2025-02-26 00:08:16] -rw-r--r--. 2 boincer umatlas    503546 Feb 25 21:37 input.tar.gz
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas         0 Feb 25 21:37 boinc_lockfile
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas      2537 Feb 25 21:37 pandaJob.out
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas       467 Feb 25 21:37 setup.sh.local
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas    987482 Feb 25 21:38 agis_schedconf.cvmfs.json
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas   1573632 Feb 25 21:38 agis_ddmendpoints.agis.ALL.json
[2025-02-26 00:08:16] drwx------. 4 boincer umatlas      4096 Feb 25 21:38 pilot3
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas      6840 Feb 26 00:03 init_data.xml
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas       529 Feb 26 00:07 boinc_task_state.xml
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas 185689652 Feb 26 00:07 HITS.43401155._000799.pool.root.1
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas      1040 Feb 26 00:07 memory_monitor_summary.json
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas    381060 Feb 26 00:07 log.43401155._000799.job.log.tgz.1
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas        95 Feb 26 00:07 pilot_heartbeat.json
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas      7730 Feb 26 00:07 heartbeat.json
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas      8192 Feb 26 00:08 boinc_mmap_file
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas        27 Feb 26 00:08 wrapper_checkpoint.txt
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas      4596 Feb 26 00:08 pilotlog.txt
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas    869294 Feb 26 00:08 log.43401155._000799.job.log.1
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas       357 Feb 26 00:08 output.list
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas       620 Feb 26 00:08 runtime_log
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas   1269760 Feb 26 00:08 result.tar.gz
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas     11423 Feb 26 00:08 runtime_log.err
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas       653 Feb 26 00:08 9moLDmVWI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm4HxKDmH6QFkm.diag
[2025-02-26 00:08:16] -rw-r--r--. 1 boincer umatlas     22323 Feb 26 00:08 stderr.txt
[2025-02-26 00:08:16] HITS file was successfully produced:
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas 185689652 Feb 26 00:07 shared/HITS.pool.root.1
[2025-02-26 00:08:16]  *** Contents of shared directory: ***
[2025-02-26 00:08:16] total 430316
[2025-02-26 00:08:16] -rw-r--r--. 2 boincer umatlas 253152002 Feb 25 21:37 ATLAS.root_0
[2025-02-26 00:08:16] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 21:37 start_atlas.sh
[2025-02-26 00:08:16] -rw-r--r--. 2 boincer umatlas    503546 Feb 25 21:37 input.tar.gz
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas 185689652 Feb 26 00:07 HITS.pool.root.1
[2025-02-26 00:08:16] -rw-------. 1 boincer umatlas   1269760 Feb 26 00:08 result.tar.gz
00:08:17 (3055275): run_atlas exited; CPU time 40528.383457
00:08:17 (3055275): called boinc_finish(0)

</stderr_txt>
]]>

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