Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
02:22:37 (3398455): wrapper (7.7.26015): starting
02:22:37 (3398455): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 02:22:37] Arguments: --nthreads 12
[2025-02-26 02:22:37] Threads: 12
[2025-02-26 02:22:37] Checking for CVMFS
[2025-02-26 02:22:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 02:22:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 02:22:37] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 02:22:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 02:22:37] 2.12.6.0 10657 2440 55768 143058 1 56 4475423 6291457 921 130560 5 2838918 99.997 213847 491 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.12.5:3128 1
[2025-02-26 02:22:37] CVMFS is ok
[2025-02-26 02:22:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 02:22:37] Checking for apptainer binary...
[2025-02-26 02:22:37] apptainer is not installed, using version from CVMFS
[2025-02-26 02:22:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 02:22:37] pm101
[2025-02-26 02:22:37] apptainer works
[2025-02-26 02:22:37] Set ATHENA_PROC_NUMBER=12
[2025-02-26 02:22:37] Set ATHENA_CORE_NUMBER=12
[2025-02-26 02:22:37] Starting ATLAS job with PandaID=6531062580
[2025-02-26 02:22:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 03:08:37]  *** The last 200 lines of the pilot log: ***
[2025-02-26 03:08:37]  is_altstaged=None
[2025-02-26 03:08:37]  is_tar=False
[2025-02-26 03:08:37]  lfn=log.43401155._001489.job.log.tgz.1
[2025-02-26 03:08:37]  mtime=0
[2025-02-26 03:08:37]  protocol_id=None
[2025-02-26 03:08:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 03:08:37]  replicas=None
[2025-02-26 03:08:37]  scope=mc23_13p6TeV
[2025-02-26 03:08:37]  status=None
[2025-02-26 03:08:37]  status_code=0
[2025-02-26 03:08:37]  storage_token=
[2025-02-26 03:08:37]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6531062580/log.43401155._001489.job.log.tgz.1
[2025-02-26 03:08:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/3b/log.43401155._001489.job.log.tgz.1
[2025-02-26 03:08:37]  workdir=None
[2025-02-26 03:08:37] ]
[2025-02-26 03:08:37] 2025-02-26 02:08:12,132 | INFO     | transferring file log.43401155._001489.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6531062580/log.43401155._001489.job.log.tgz.1 to /var/lib/boinc
[2025-02-26 03:08:37] 2025-02-26 02:08:12,132 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6531062580/log.43401155._001489.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.434011
[2025-02-26 03:08:37] 2025-02-26 02:08:12,144 | INFO     | adding to output.list: log.43401155._001489.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b9/3b/log.43401155._001489.job.log.tg
[2025-02-26 03:08:37] 2025-02-26 02:08:12,144 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 03:08:37] 2025-02-26 02:08:12,144 | INFO     | summary of transferred files:
[2025-02-26 03:08:37] 2025-02-26 02:08:12,144 | INFO     |  -- lfn=log.43401155._001489.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 03:08:37] 2025-02-26 02:08:12,144 | INFO     | stage-out finished correctly
[2025-02-26 03:08:37] 2025-02-26 02:08:12,192 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 03:08:37] 2025-02-26 02:08:14,889 | INFO     | job 6531062580 has state=finished
[2025-02-26 03:08:37] 2025-02-26 02:08:14,889 | INFO     | preparing for final server update for job 6531062580 in state='finished'
[2025-02-26 03:08:37] 2025-02-26 02:08:14,889 | INFO     | this job has now completed (state=finished)
[2025-02-26 03:08:37] 2025-02-26 02:08:14,889 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 03:08:37] 2025-02-26 02:08:14,889 | INFO     | log transfer has been attempted: DONE
[2025-02-26 03:08:37] 2025-02-26 02:08:14,890 | INFO     | job 6531062580 has finished - writing final server update
[2025-02-26 03:08:37] 2025-02-26 02:08:14,890 | INFO     | total number of processed events: 400 (read)
[2025-02-26 03:08:37] 2025-02-26 02:08:14,892 | INFO     | executing command: lscpu
[2025-02-26 03:08:37] 2025-02-26 02:08:14,916 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-26 03:08:37] 2025-02-26 02:08:14,926 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 03:08:37] 2025-02-26 02:08:17,647 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 03:08:37] 2025-02-26 02:08:17,648 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6531062580/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 03:08:37] 2025-02-26 02:08:17,653 | INFO     | extracted standard info from prmon json
[2025-02-26 03:08:37] 2025-02-26 02:08:17,653 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 03:08:37] 2025-02-26 02:08:17,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 03:08:37] 2025-02-26 02:08:17,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 03:08:37] 2025-02-26 02:08:17,654 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 03:08:37] 2025-02-26 02:08:17,655 | INFO     | fitting pss+swap vs Time
[2025-02-26 03:08:37] 2025-02-26 02:08:17,655 | INFO     | model: linear, x: [1740533290.0, 1740533351.0, 1740533412.0, 1740533473.0, 1740533534.0, 1740533595.0, 1740533656.0, 1740533717.0, 1740533778.0, 1740533839.0, 1740
[2025-02-26 03:08:37] 2025-02-26 02:08:17,655 | INFO     | sum of square deviations: 17003109.5
[2025-02-26 03:08:37] 2025-02-26 02:08:17,656 | INFO     | sum of deviations: -927316052.5
[2025-02-26 03:08:37] 2025-02-26 02:08:17,656 | INFO     | mean x: 1740534418.5
[2025-02-26 03:08:37] 2025-02-26 02:08:17,656 | INFO     | mean y: 3007575.289473684
[2025-02-26 03:08:37] 2025-02-26 02:08:17,656 | INFO     | -- intersect: 94928321454.13045
[2025-02-26 03:08:37] 2025-02-26 02:08:17,656 | INFO     | intersect: 94928321454.13045
[2025-02-26 03:08:37] 2025-02-26 02:08:17,656 | INFO     | chi2: 0.05235746172258903
[2025-02-26 03:08:37] 2025-02-26 02:08:17,656 | INFO     | -- intersect: 94928321454.13045
[2025-02-26 03:08:37] 2025-02-26 02:08:17,656 | INFO     | current memory leak: -54.54 B/s (using 38 data points, chi2=0.05)
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | ..............................
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | . Timing measurements:
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | . get job = 0 s
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | . initial setup = 1 s
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | . payload setup = 3 s
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | . stage-in = 0 s
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | . payload execution = 2705 s
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | . stage-out = 0 s
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | . log creation = 0 s
[2025-02-26 03:08:37] 2025-02-26 02:08:17,657 | INFO     | ..............................
[2025-02-26 03:08:37] 2025-02-26 02:08:17,725 | WARNING  | process 3409871 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 03:08:37] 2025-02-26 02:08:17,726 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6531062580/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 03:08:37] 2025-02-26 02:08:17,802 | INFO     | number of running child processes to parent process 3409871: 1
[2025-02-26 03:08:37] 2025-02-26 02:08:17,802 | INFO     | maximum number of monitored processes: 6
[2025-02-26 03:08:37] 2025-02-26 02:08:17,803 | INFO     | aborting job monitoring since job object (job id=6531062580) has expired
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | 
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | job summary report
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | --------------------------------------------------
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | PanDA job id: 6531062580
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | task id: 43401155
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | errors: (none)
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | pilot state: finished 
[2025-02-26 03:08:37] 2025-02-26 02:08:18,193 | INFO     | transexitcode: 0
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | exeerrorcode: 0
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | exeerrordiag: 
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | exitcode: 0
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | exitmsg: OK
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | cpuconsumptiontime: 27396 s
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | nevents: 400
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | neventsw: 0
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | pid: 3409871
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | pgrp: 3409871
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | corecount: 12
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | event service: False
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | sizes: {0: 2370388, 3: 2370594, 11: 2370622, 2713: 2395898, 2714: 2404909, 2720: 2405023}
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | --------------------------------------------------
[2025-02-26 03:08:37] 2025-02-26 02:08:18,194 | INFO     | 
[2025-02-26 03:08:37] 2025-02-26 02:08:18,195 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-02-26 03:08:37] 2025-02-26 02:08:18,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,210 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | job 6531062580 has completed (purged errors)
[2025-02-26 03:08:37] 2025-02-26 02:08:18,211 | INFO     | overall cleanup function is called
[2025-02-26 03:08:37] 2025-02-26 02:08:19,218 | INFO     | --- collectZombieJob: --- 10, [3409871]
[2025-02-26 03:08:37] 2025-02-26 02:08:19,218 | INFO     | zombie collector waiting for pid 3409871
[2025-02-26 03:08:37] 2025-02-26 02:08:19,218 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 03:08:37] 2025-02-26 02:08:19,218 | INFO     | collected zombie processes
[2025-02-26 03:08:37] 2025-02-26 02:08:19,218 | INFO     | will attempt to kill all subprocesses of pid=3409871
[2025-02-26 03:08:37] 2025-02-26 02:08:19,296 | INFO     | process IDs to be killed: [3409871] (in reverse order)
[2025-02-26 03:08:37] 2025-02-26 02:08:19,386 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 03:08:37] 2025-02-26 02:08:19,386 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 03:08:37] 2025-02-26 02:08:19,394 | INFO     | did not find any defunct processes belonging to 3409871
[2025-02-26 03:08:37] 2025-02-26 02:08:19,400 | INFO     | did not find any defunct processes belonging to 3409871
[2025-02-26 03:08:37] 2025-02-26 02:08:19,400 | INFO     | ready for new job
[2025-02-26 03:08:37] 2025-02-26 02:08:19,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 03:08:37] 2025-02-26 02:08:19,401 | INFO     | **************************************
[2025-02-26 03:08:37] 2025-02-26 02:08:19,401 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 03:08:37] 2025-02-26 02:08:19,401 | INFO     | **************************************
[2025-02-26 03:08:37] 2025-02-26 02:08:19,401 | INFO     | 
[2025-02-26 03:08:37] 2025-02-26 02:08:19,403 | INFO     | architecture information:
[2025-02-26 03:08:37] 2025-02-26 02:08:19,403 | INFO     | executing command: cat /etc/os-release
[2025-02-26 03:08:37] 2025-02-26 02:08:19,410 | INFO     | cat /etc/os-release:
[2025-02-26 03:08:37] NAME="CentOS Linux"
[2025-02-26 03:08:37] VERSION="7 (Core)"
[2025-02-26 03:08:37] ID="centos"
[2025-02-26 03:08:37] ID_LIKE="rhel fedora"
[2025-02-26 03:08:37] VERSION_ID="7"
[2025-02-26 03:08:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 03:08:37] ANSI_COLOR="0;31"
[2025-02-26 03:08:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 03:08:37] HOME_URL="https://www.centos.org/"
[2025-02-26 03:08:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 03:08:37] 
[2025-02-26 03:08:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 03:08:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 03:08:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 03:08:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 03:08:37] 
[2025-02-26 03:08:37] 2025-02-26 02:08:19,411 | INFO     | **************************************
[2025-02-26 03:08:37] 2025-02-26 02:08:19,913 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-02-26 03:08:37] 2025-02-26 02:08:19,924 | INFO     | sufficient remaining disk space (897130168320 B)
[2025-02-26 03:08:37] 2025-02-26 02:08:19,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 03:08:37] 2025-02-26 02:08:19,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 03:08:37] 2025-02-26 02:08:19,924 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 03:08:37] 2025-02-26 02:08:19,924 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 03:08:37] 2025-02-26 02:08:19,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 03:08:37] 2025-02-26 02:08:19,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 03:08:37] 2025-02-26 02:08:20,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 03:08:37] 2025-02-26 02:08:20,306 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 03:08:37] 2025-02-26 02:08:20,306 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 03:08:37] 2025-02-26 02:08:20,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 03:08:37] 2025-02-26 02:08:20,306 | INFO     | will abort loop
[2025-02-26 03:08:37] 2025-02-26 02:08:20,638 | INFO     | all data control threads have been joined
[2025-02-26 03:08:37] 2025-02-26 02:08:20,928 | INFO     | all payload control threads have been joined
[2025-02-26 03:08:37] 2025-02-26 02:08:20,929 | INFO     | [job] retrieve thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:21,071 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:21,084 | INFO     | all job control threads have been joined
[2025-02-26 03:08:37] 2025-02-26 02:08:21,311 | INFO     | [job] job monitor thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:21,601 | INFO     | [payload] validate_post thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:21,644 | INFO     | [data] control thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:21,934 | INFO     | [payload] control thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:21,950 | INFO     | [payload] failed_post thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:22,089 | INFO     | [job] control thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:22,194 | INFO     | [data] copytool_in thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:22,214 | INFO     | [data] copytool_out thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:22,259 | INFO     | [job] validate thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:22,369 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:22,405 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:22,717 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 03:08:37] 2025-02-26 02:08:22,749 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 03:08:37] 2025-02-26 02:08:23,722 | INFO     | [job] queue monitor thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:26,754 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:30,250 | INFO     | job.realtimelogging is not enabled
[2025-02-26 03:08:37] 2025-02-26 02:08:31,255 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 03:08:37] 2025-02-26 02:08:32,144 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135315391186752)>', '<ExcThread(monitor, started 135314970511104)>']
[2025-02-26 03:08:37] 2025-02-26 02:08:32,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 03:08:37] 2025-02-26 02:08:32,983 | INFO     | [monitor] control thread has ended
[2025-02-26 03:08:37] 2025-02-26 02:08:37,169 | INFO     | all workflow threads have been joined
[2025-02-26 03:08:37] 2025-02-26 02:08:37,169 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 03:08:37] 2025-02-26 02:08:37,169 | INFO     | traces error code: 0
[2025-02-26 03:08:37] 2025-02-26 02:08:37,170 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 03:08:37] 2025-02-26 02:08:37,239 [wrapper] ==== pilot stdout END ====
[2025-02-26 03:08:37] 2025-02-26 02:08:37,241 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 03:08:37] 2025-02-26 02:08:37,243 [wrapper] pilotpid: 3402456
[2025-02-26 03:08:37] 2025-02-26 02:08:37,244 [wrapper] Pilot exit status: 0
[2025-02-26 03:08:37] 2025-02-26 02:08:37,251 [wrapper] pandaids: 6531062580
[2025-02-26 03:08:37] 2025-02-26 02:08:37,297 [wrapper] cleanup supervisor_pilot 3527591 3402457
[2025-02-26 03:08:37] 2025-02-26 02:08:37,298 [wrapper] Test setup, not cleaning
[2025-02-26 03:08:37] 2025-02-26 02:08:37,302 [wrapper] apfmon messages muted
[2025-02-26 03:08:37] 2025-02-26 02:08:37,303 [wrapper] ==== wrapper stdout END ====
[2025-02-26 03:08:37] 2025-02-26 02:08:37,305 [wrapper] ==== wrapper stderr END ====
[2025-02-26 03:08:37]  *** Error codes and diagnostics ***
[2025-02-26 03:08:37]     "exeErrorCode": 0,
[2025-02-26 03:08:37]     "exeErrorDiag": "",
[2025-02-26 03:08:37]     "pilotErrorCode": 0,
[2025-02-26 03:08:37]     "pilotErrorDiag": "",
[2025-02-26 03:08:37]  *** Listing of results directory ***
[2025-02-26 03:08:37] total 436569
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc    491065 Feb 25 23:04 pilot3.tar.gz
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc      5118 Feb 25 23:24 queuedata.json
[2025-02-26 03:08:37] -rwx------ 1 boinc boinc     35865 Feb 25 23:25 runpilot2-wrapper.sh
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc       100 Feb 26 02:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 03:08:37] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 02:22 run_atlas
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc       105 Feb 26 02:22 job.xml
[2025-02-26 03:08:37] -rw-r--r-- 2 boinc boinc 251805992 Feb 26 02:22 EVNT.43401153._000060.pool.root.1
[2025-02-26 03:08:37] -rw-r--r-- 2 boinc boinc     17569 Feb 26 02:22 start_atlas.sh
[2025-02-26 03:08:37] drwxrwx--x 2 boinc boinc         5 Feb 26 02:22 shared
[2025-02-26 03:08:37] -rw-r--r-- 2 boinc boinc    503547 Feb 26 02:22 input.tar.gz
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc      6799 Feb 26 02:22 init_data.xml
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc         0 Feb 26 02:22 boinc_lockfile
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc      2539 Feb 26 02:22 pandaJob.out
[2025-02-26 03:08:37] -rw------- 1 boinc boinc       459 Feb 26 02:22 setup.sh.local
[2025-02-26 03:08:37] -rw------- 1 boinc boinc    987490 Feb 26 02:22 agis_schedconf.cvmfs.json
[2025-02-26 03:08:37] -rw------- 1 boinc boinc   1573632 Feb 26 02:22 agis_ddmendpoints.agis.ALL.json
[2025-02-26 03:08:37] drwx------ 4 boinc boinc        20 Feb 26 02:22 pilot3
[2025-02-26 03:08:37] -rw------- 1 boinc boinc        95 Feb 26 03:07 pilot_heartbeat.json
[2025-02-26 03:08:37] -rw------- 1 boinc boinc 192979690 Feb 26 03:07 HITS.43401155._001489.pool.root.1
[2025-02-26 03:08:37] -rw------- 1 boinc boinc      1042 Feb 26 03:08 memory_monitor_summary.json
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc      8192 Feb 26 03:08 boinc_mmap_file
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc        27 Feb 26 03:08 wrapper_checkpoint.txt
[2025-02-26 03:08:37] -rw------- 1 boinc boinc    345681 Feb 26 03:08 log.43401155._001489.job.log.tgz.1
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc       529 Feb 26 03:08 boinc_task_state.xml
[2025-02-26 03:08:37] -rw------- 1 boinc boinc      7704 Feb 26 03:08 heartbeat.json
[2025-02-26 03:08:37] -rw------- 1 boinc boinc      4604 Feb 26 03:08 pilotlog.txt
[2025-02-26 03:08:37] -rw------- 1 boinc boinc    296604 Feb 26 03:08 log.43401155._001489.job.log.1
[2025-02-26 03:08:37] -rw------- 1 boinc boinc       357 Feb 26 03:08 output.list
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc       620 Feb 26 03:08 runtime_log
[2025-02-26 03:08:37] -rw------- 1 boinc boinc    665600 Feb 26 03:08 result.tar.gz
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc     11442 Feb 26 03:08 runtime_log.err
[2025-02-26 03:08:37] -rw------- 1 boinc boinc       646 Feb 26 03:08 cUIMDmTXI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmRJxKDmcVTd4m.diag
[2025-02-26 03:08:37] -rw-r--r-- 1 boinc boinc     21259 Feb 26 03:08 stderr.txt
[2025-02-26 03:08:37] HITS file was successfully produced:
[2025-02-26 03:08:37] -rw------- 1 boinc boinc 192979690 Feb 26 03:07 shared/HITS.pool.root.1
[2025-02-26 03:08:37]  *** Contents of shared directory: ***
[2025-02-26 03:08:37] total 435187
[2025-02-26 03:08:37] -rw-r--r-- 2 boinc boinc 251805992 Feb 26 02:22 ATLAS.root_0
[2025-02-26 03:08:37] -rw-r--r-- 2 boinc boinc     17569 Feb 26 02:22 start_atlas.sh
[2025-02-26 03:08:37] -rw-r--r-- 2 boinc boinc    503547 Feb 26 02:22 input.tar.gz
[2025-02-26 03:08:37] -rw------- 1 boinc boinc 192979690 Feb 26 03:07 HITS.pool.root.1
[2025-02-26 03:08:37] -rw------- 1 boinc boinc    665600 Feb 26 03:08 result.tar.gz
03:08:39 (3398455): run_atlas exited; CPU time 27404.288240
03:08:39 (3398455): called boinc_finish(0)

</stderr_txt>
]]>

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