Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
08:08:19 (2025048): wrapper (7.7.26015): starting
08:08:19 (2025048): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 08:08:19] Arguments: --nthreads 12
[2025-02-26 08:08:19] Threads: 12
[2025-02-26 08:08:19] Checking for CVMFS
[2025-02-26 08:08:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 08:08:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 08:08:19] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 08:08:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 08:08:20] 2.12.6.0 1166473 974 61176 143057 3 187 5271364 6291457 3361 130560 0 3793684 99.894 715575 289 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.11.5:3128 1
[2025-02-26 08:08:20] CVMFS is ok
[2025-02-26 08:08:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 08:08:20] Checking for apptainer binary...
[2025-02-26 08:08:20] apptainer is not installed, using version from CVMFS
[2025-02-26 08:08:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 08:08:20] pm111
[2025-02-26 08:08:20] apptainer works
[2025-02-26 08:08:20] Set ATHENA_PROC_NUMBER=12
[2025-02-26 08:08:20] Set ATHENA_CORE_NUMBER=12
[2025-02-26 08:08:20] Starting ATLAS job with PandaID=6531061803
[2025-02-26 08:08:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 09:43:59]  *** The last 200 lines of the pilot log: ***
[2025-02-26 09:43:59]  storage_token=
[2025-02-26 09:43:59]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803/log.43401155._001149.job.log.tgz.1
[2025-02-26 09:43:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/db/log.43401155._001149.job.log.tgz.1
[2025-02-26 09:43:59]  workdir=None
[2025-02-26 09:43:59] ]
[2025-02-26 09:43:59] 2025-02-26 02:43:36,893 | INFO     | transferring file log.43401155._001149.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803/log.43401155._001149.job.log.tgz.1 to /var/lib/boinc
[2025-02-26 09:43:59] 2025-02-26 02:43:36,893 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803/log.43401155._001149.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.434011
[2025-02-26 09:43:59] 2025-02-26 02:43:36,905 | INFO     | adding to output.list: log.43401155._001149.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/db/log.43401155._001149.job.log.tg
[2025-02-26 09:43:59] 2025-02-26 02:43:36,906 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 09:43:59] 2025-02-26 02:43:36,906 | INFO     | summary of transferred files:
[2025-02-26 09:43:59] 2025-02-26 02:43:36,906 | INFO     |  -- lfn=log.43401155._001149.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 09:43:59] 2025-02-26 02:43:36,906 | INFO     | stage-out finished correctly
[2025-02-26 09:43:59] 2025-02-26 02:43:38,505 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 09:43:59] 2025-02-26 02:43:40,378 | INFO     | job 6531061803 has state=finished
[2025-02-26 09:43:59] 2025-02-26 02:43:40,378 | INFO     | preparing for final server update for job 6531061803 in state='finished'
[2025-02-26 09:43:59] 2025-02-26 02:43:40,379 | INFO     | this job has now completed (state=finished)
[2025-02-26 09:43:59] 2025-02-26 02:43:40,379 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 09:43:59] 2025-02-26 02:43:40,379 | INFO     | log transfer has been attempted: DONE
[2025-02-26 09:43:59] 2025-02-26 02:43:40,379 | INFO     | job 6531061803 has finished - writing final server update
[2025-02-26 09:43:59] 2025-02-26 02:43:40,380 | INFO     | total number of processed events: 400 (read)
[2025-02-26 09:43:59] 2025-02-26 02:43:40,384 | INFO     | executing command: lscpu
[2025-02-26 09:43:59] 2025-02-26 02:43:40,415 | INFO     | found 36 cores (18 cores per socket, 2 sockets)
[2025-02-26 09:43:59] 2025-02-26 02:43:40,435 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 09:43:59] 2025-02-26 02:43:40,464 | WARNING  | process 2041618 can no longer be monitored (due to stat problems) - aborting
[2025-02-26 09:43:59] 2025-02-26 02:43:40,464 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 09:43:59] 2025-02-26 02:43:40,465 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 09:43:59] 2025-02-26 02:43:40,467 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4638373 B
[2025-02-26 09:43:59] 2025-02-26 02:43:40,467 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16030 B
[2025-02-26 09:43:59] 2025-02-26 02:43:40,467 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-02-26 09:43:59] 2025-02-26 02:43:41,802 | INFO     | PID=2029334 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-26 09:43:59] 2025-02-26 02:43:41,803 | INFO     | .. there are 6 such processes running
[2025-02-26 09:43:59] 2025-02-26 02:43:44,742 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 09:43:59] 2025-02-26 02:43:44,743 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 09:43:59] 2025-02-26 02:43:44,750 | INFO     | extracted standard info from prmon json
[2025-02-26 09:43:59] 2025-02-26 02:43:44,751 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 09:43:59] 2025-02-26 02:43:44,751 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 09:43:59] 2025-02-26 02:43:44,751 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 09:43:59] 2025-02-26 02:43:44,751 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 09:43:59] 2025-02-26 02:43:44,754 | INFO     | fitting pss+swap vs Time
[2025-02-26 09:43:59] 2025-02-26 02:43:44,754 | INFO     | model: linear, x: [1740532434.0, 1740532495.0, 1740532556.0, 1740532617.0, 1740532678.0, 1740532739.0, 1740532800.0, 1740532861.0, 1740532922.0, 1740532983.0, 1740
[2025-02-26 09:43:59] 2025-02-26 02:43:44,755 | INFO     | sum of square deviations: 204163828.0
[2025-02-26 09:43:59] 2025-02-26 02:43:44,755 | INFO     | sum of deviations: 6580751918.999999
[2025-02-26 09:43:59] 2025-02-26 02:43:44,755 | INFO     | mean x: 1740535057.0
[2025-02-26 09:43:59] 2025-02-26 02:43:44,755 | INFO     | mean y: 2687277.9310344825
[2025-02-26 09:43:59] 2025-02-26 02:43:44,756 | INFO     | -- intersect: -56099461318.340004
[2025-02-26 09:43:59] 2025-02-26 02:43:44,756 | INFO     | intersect: -56099461318.340004
[2025-02-26 09:43:59] 2025-02-26 02:43:44,756 | INFO     | chi2: 0.14470072327360914
[2025-02-26 09:43:59] 2025-02-26 02:43:44,756 | INFO     | -- intersect: -56099461318.340004
[2025-02-26 09:43:59] 2025-02-26 02:43:44,756 | INFO     | current memory leak: 32.23 B/s (using 87 data points, chi2=0.14)
[2025-02-26 09:43:59] 2025-02-26 02:43:44,757 | INFO     | ..............................
[2025-02-26 09:43:59] 2025-02-26 02:43:44,757 | INFO     | . Timing measurements:
[2025-02-26 09:43:59] 2025-02-26 02:43:44,757 | INFO     | . get job = 0 s
[2025-02-26 09:43:59] 2025-02-26 02:43:44,757 | INFO     | . initial setup = 3 s
[2025-02-26 09:43:59] 2025-02-26 02:43:44,758 | INFO     | . payload setup = 3 s
[2025-02-26 09:43:59] 2025-02-26 02:43:44,758 | INFO     | . stage-in = 0 s
[2025-02-26 09:43:59] 2025-02-26 02:43:44,758 | INFO     | . payload execution = 5685 s
[2025-02-26 09:43:59] 2025-02-26 02:43:44,758 | INFO     | . stage-out = 1 s
[2025-02-26 09:43:59] 2025-02-26 02:43:44,758 | INFO     | . log creation = 0 s
[2025-02-26 09:43:59] 2025-02-26 02:43:44,759 | INFO     | sufficient remaining disk space (1728273448960 B)
[2025-02-26 09:43:59] 2025-02-26 02:43:44,759 | INFO     | ..............................
[2025-02-26 09:43:59] 2025-02-26 02:43:44,759 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-26 09:43:59] 2025-02-26 02:43:44,870 | INFO     | size of work directory /var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803: 4944948 B (within 2537553920 B limit)
[2025-02-26 09:43:59] 2025-02-26 02:43:44,871 | INFO     | pfn file=/var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803/HITS.43401155._001149.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-26 09:43:59] 2025-02-26 02:43:44,871 | INFO     | total size of present files: 0 B (workdir size: 4944948 B)
[2025-02-26 09:43:59] 2025-02-26 02:43:44,871 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/7/PanDA_Pilot-6531061803/HITS.43401155._001149.pool.root.1 since it does not exist
[2025-02-26 09:43:59] 2025-02-26 02:43:44,987 | INFO     | number of running child processes to parent process 2041618: 1
[2025-02-26 09:43:59] 2025-02-26 02:43:44,987 | INFO     | maximum number of monitored processes: 6
[2025-02-26 09:43:59] 2025-02-26 02:43:44,987 | INFO     | aborting job monitoring since job object (job id=6531061803) has expired
[2025-02-26 09:43:59] 2025-02-26 02:43:45,315 | INFO     | 
[2025-02-26 09:43:59] 2025-02-26 02:43:45,315 | INFO     | job summary report
[2025-02-26 09:43:59] 2025-02-26 02:43:45,315 | INFO     | --------------------------------------------------
[2025-02-26 09:43:59] 2025-02-26 02:43:45,316 | INFO     | PanDA job id: 6531061803
[2025-02-26 09:43:59] 2025-02-26 02:43:45,316 | INFO     | task id: 43401155
[2025-02-26 09:43:59] 2025-02-26 02:43:45,316 | INFO     | errors: (none)
[2025-02-26 09:43:59] 2025-02-26 02:43:45,316 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 09:43:59] 2025-02-26 02:43:45,316 | INFO     | pilot state: finished 
[2025-02-26 09:43:59] 2025-02-26 02:43:45,316 | INFO     | transexitcode: 0
[2025-02-26 09:43:59] 2025-02-26 02:43:45,317 | INFO     | exeerrorcode: 0
[2025-02-26 09:43:59] 2025-02-26 02:43:45,317 | INFO     | exeerrordiag: 
[2025-02-26 09:43:59] 2025-02-26 02:43:45,317 | INFO     | exitcode: 0
[2025-02-26 09:43:59] 2025-02-26 02:43:45,317 | INFO     | exitmsg: OK
[2025-02-26 09:43:59] 2025-02-26 02:43:45,317 | INFO     | cpuconsumptiontime: 50720 s
[2025-02-26 09:43:59] 2025-02-26 02:43:45,317 | INFO     | nevents: 400
[2025-02-26 09:43:59] 2025-02-26 02:43:45,317 | INFO     | neventsw: 0
[2025-02-26 09:43:59] 2025-02-26 02:43:45,318 | INFO     | pid: 2041618
[2025-02-26 09:43:59] 2025-02-26 02:43:45,318 | INFO     | pgrp: 2041618
[2025-02-26 09:43:59] 2025-02-26 02:43:45,318 | INFO     | corecount: 12
[2025-02-26 09:43:59] 2025-02-26 02:43:45,318 | INFO     | event service: False
[2025-02-26 09:43:59] 2025-02-26 02:43:45,318 | INFO     | sizes: {0: 2370217, 1: 2370416, 4: 2370622, 11: 2370650, 5693: 2397205, 5694: 2406160, 5696: 2406344, 5702: 2406514}
[2025-02-26 09:43:59] 2025-02-26 02:43:45,318 | INFO     | --------------------------------------------------
[2025-02-26 09:43:59] 2025-02-26 02:43:45,318 | INFO     | 
[2025-02-26 09:43:59] 2025-02-26 02:43:45,319 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-02-26 09:43:59] 2025-02-26 02:43:45,337 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,337 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,338 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,338 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,338 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,339 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,340 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 09:43:59] 2025-02-26 02:43:45,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,341 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 09:43:59] 2025-02-26 02:43:45,341 | INFO     | job 6531061803 has completed (purged errors)
[2025-02-26 09:43:59] 2025-02-26 02:43:45,341 | INFO     | overall cleanup function is called
[2025-02-26 09:43:59] 2025-02-26 02:43:46,348 | INFO     | --- collectZombieJob: --- 10, [2041618]
[2025-02-26 09:43:59] 2025-02-26 02:43:46,349 | INFO     | zombie collector waiting for pid 2041618
[2025-02-26 09:43:59] 2025-02-26 02:43:46,349 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 09:43:59] 2025-02-26 02:43:46,349 | INFO     | collected zombie processes
[2025-02-26 09:43:59] 2025-02-26 02:43:46,349 | INFO     | will attempt to kill all subprocesses of pid=2041618
[2025-02-26 09:43:59] 2025-02-26 02:43:46,470 | INFO     | process IDs to be killed: [2041618] (in reverse order)
[2025-02-26 09:43:59] 2025-02-26 02:43:46,580 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 09:43:59] 2025-02-26 02:43:46,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 09:43:59] 2025-02-26 02:43:46,594 | INFO     | did not find any defunct processes belonging to 2041618
[2025-02-26 09:43:59] 2025-02-26 02:43:46,605 | INFO     | did not find any defunct processes belonging to 2041618
[2025-02-26 09:43:59] 2025-02-26 02:43:46,605 | INFO     | ready for new job
[2025-02-26 09:43:59] 2025-02-26 02:43:46,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 09:43:59] 2025-02-26 02:43:46,607 | INFO     | **************************************
[2025-02-26 09:43:59] 2025-02-26 02:43:46,607 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 09:43:59] 2025-02-26 02:43:46,607 | INFO     | **************************************
[2025-02-26 09:43:59] 2025-02-26 02:43:46,607 | INFO     | 
[2025-02-26 09:43:59] 2025-02-26 02:43:46,611 | INFO     | architecture information:
[2025-02-26 09:43:59] 2025-02-26 02:43:46,611 | INFO     | executing command: cat /etc/os-release
[2025-02-26 09:43:59] 2025-02-26 02:43:46,624 | INFO     | cat /etc/os-release:
[2025-02-26 09:43:59] NAME="CentOS Linux"
[2025-02-26 09:43:59] VERSION="7 (Core)"
[2025-02-26 09:43:59] ID="centos"
[2025-02-26 09:43:59] ID_LIKE="rhel fedora"
[2025-02-26 09:43:59] VERSION_ID="7"
[2025-02-26 09:43:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 09:43:59] ANSI_COLOR="0;31"
[2025-02-26 09:43:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 09:43:59] HOME_URL="https://www.centos.org/"
[2025-02-26 09:43:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 09:43:59] 
[2025-02-26 09:43:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 09:43:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 09:43:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 09:43:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 09:43:59] 
[2025-02-26 09:43:59] 2025-02-26 02:43:46,624 | INFO     | **************************************
[2025-02-26 09:43:59] 2025-02-26 02:43:47,127 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-02-26 09:43:59] 2025-02-26 02:43:47,143 | INFO     | sufficient remaining disk space (1728273448960 B)
[2025-02-26 09:43:59] 2025-02-26 02:43:47,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 09:43:59] 2025-02-26 02:43:47,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 09:43:59] 2025-02-26 02:43:47,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 09:43:59] 2025-02-26 02:43:47,490 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 09:43:59] 2025-02-26 02:43:47,491 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 09:43:59] 2025-02-26 02:43:47,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 09:43:59] 2025-02-26 02:43:47,491 | INFO     | will abort loop
[2025-02-26 09:43:59] 2025-02-26 02:43:47,611 | INFO     | all payload control threads have been joined
[2025-02-26 09:43:59] 2025-02-26 02:43:47,722 | INFO     | all data control threads have been joined
[2025-02-26 09:43:59] 2025-02-26 02:43:47,819 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 09:43:59] 2025-02-26 02:43:47,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 09:43:59] 2025-02-26 02:43:47,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 09:43:59] 2025-02-26 02:43:48,138 | INFO     | all job control threads have been joined
[2025-02-26 09:43:59] 2025-02-26 02:43:48,149 | INFO     | [job] retrieve thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:48,405 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:48,496 | INFO     | [job] job monitor thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:48,617 | INFO     | [payload] control thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:48,717 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:48,727 | INFO     | [data] control thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,010 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,025 | INFO     | [data] copytool_in thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,089 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 09:43:59] 2025-02-26 02:43:49,143 | INFO     | [job] control thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,163 | INFO     | [payload] failed_post thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,493 | INFO     | [data] copytool_out thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,614 | INFO     | [job] validate thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,627 | INFO     | [payload] validate_post thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:49,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 09:43:59] 2025-02-26 02:43:50,884 | INFO     | [job] queue monitor thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:53,126 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 09:43:59] 2025-02-26 02:43:53,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127256020027200)>', '<ExcThread(monitor, started 127255449700096)>']
[2025-02-26 09:43:59] 2025-02-26 02:43:54,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 09:43:59] 2025-02-26 02:43:54,855 | INFO     | [monitor] control thread has ended
[2025-02-26 09:43:59] 2025-02-26 02:43:58,876 | INFO     | all workflow threads have been joined
[2025-02-26 09:43:59] 2025-02-26 02:43:58,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 09:43:59] 2025-02-26 02:43:58,877 | INFO     | traces error code: 0
[2025-02-26 09:43:59] 2025-02-26 02:43:58,877 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 09:43:59] 2025-02-26 02:43:58,980 [wrapper] ==== pilot stdout END ====
[2025-02-26 09:43:59] 2025-02-26 02:43:58,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 09:43:59] 2025-02-26 02:43:58,985 [wrapper] pilotpid: 2029334
[2025-02-26 09:43:59] 2025-02-26 02:43:58,987 [wrapper] Pilot exit status: 0
[2025-02-26 09:43:59] 2025-02-26 02:43:58,996 [wrapper] pandaids: 6531061803
[2025-02-26 09:43:59] 2025-02-26 02:43:59,058 [wrapper] cleanup supervisor_pilot 2427006 2029335
[2025-02-26 09:43:59] 2025-02-26 02:43:59,061 [wrapper] Test setup, not cleaning
[2025-02-26 09:43:59] 2025-02-26 02:43:59,066 [wrapper] apfmon messages muted
[2025-02-26 09:43:59] 2025-02-26 02:43:59,068 [wrapper] ==== wrapper stdout END ====
[2025-02-26 09:43:59] 2025-02-26 02:43:59,070 [wrapper] ==== wrapper stderr END ====
[2025-02-26 09:43:59]  *** Error codes and diagnostics ***
[2025-02-26 09:43:59]     "exeErrorCode": 0,
[2025-02-26 09:43:59]     "exeErrorDiag": "",
[2025-02-26 09:43:59]     "pilotErrorCode": 0,
[2025-02-26 09:43:59]     "pilotErrorDiag": "",
[2025-02-26 09:43:59]  *** Listing of results directory ***
[2025-02-26 09:43:59] total 430193
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc    491065 Feb 26 05:04 pilot3.tar.gz
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc      5118 Feb 26 05:23 queuedata.json
[2025-02-26 09:43:59] -rwx------ 1 boinc boinc     35865 Feb 26 05:23 runpilot2-wrapper.sh
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc       100 Feb 26 08:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 09:43:59] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 08:08 run_atlas
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc       105 Feb 26 08:08 job.xml
[2025-02-26 09:43:59] -rw-r--r-- 2 boinc boinc 251671763 Feb 26 08:08 EVNT.43401153._000046.pool.root.1
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc      6807 Feb 26 08:08 init_data.xml
[2025-02-26 09:43:59] -rw-r--r-- 2 boinc boinc     17569 Feb 26 08:08 start_atlas.sh
[2025-02-26 09:43:59] drwxrwx--x 2 boinc boinc         5 Feb 26 08:08 shared
[2025-02-26 09:43:59] -rw-r--r-- 2 boinc boinc    503552 Feb 26 08:08 input.tar.gz
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc         0 Feb 26 08:08 boinc_lockfile
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc      2539 Feb 26 08:08 pandaJob.out
[2025-02-26 09:43:59] -rw------- 1 boinc boinc       459 Feb 26 08:08 setup.sh.local
[2025-02-26 09:43:59] -rw------- 1 boinc boinc    987490 Feb 26 08:08 agis_schedconf.cvmfs.json
[2025-02-26 09:43:59] -rw------- 1 boinc boinc   1573632 Feb 26 08:08 agis_ddmendpoints.agis.ALL.json
[2025-02-26 09:43:59] drwx------ 4 boinc boinc        20 Feb 26 08:08 pilot3
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc       529 Feb 26 09:43 boinc_task_state.xml
[2025-02-26 09:43:59] -rw------- 1 boinc boinc 186518585 Feb 26 09:43 HITS.43401155._001149.pool.root.1
[2025-02-26 09:43:59] -rw------- 1 boinc boinc        95 Feb 26 09:43 pilot_heartbeat.json
[2025-02-26 09:43:59] -rw------- 1 boinc boinc      1046 Feb 26 09:43 memory_monitor_summary.json
[2025-02-26 09:43:59] -rw------- 1 boinc boinc    391711 Feb 26 09:43 log.43401155._001149.job.log.tgz.1
[2025-02-26 09:43:59] -rw------- 1 boinc boinc      7709 Feb 26 09:43 heartbeat.json
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc      8192 Feb 26 09:43 boinc_mmap_file
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc        27 Feb 26 09:43 wrapper_checkpoint.txt
[2025-02-26 09:43:59] -rw------- 1 boinc boinc      4410 Feb 26 09:43 pilotlog.txt
[2025-02-26 09:43:59] -rw------- 1 boinc boinc    558336 Feb 26 09:43 log.43401155._001149.job.log.1
[2025-02-26 09:43:59] -rw------- 1 boinc boinc       357 Feb 26 09:43 output.list
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc       620 Feb 26 09:43 runtime_log
[2025-02-26 09:43:59] -rw------- 1 boinc boinc    972800 Feb 26 09:43 result.tar.gz
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc     11454 Feb 26 09:43 runtime_log.err
[2025-02-26 09:43:59] -rw------- 1 boinc boinc       648 Feb 26 09:43 RdBMDmTWI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmhGxKDmsCAh1m.diag
[2025-02-26 09:43:59] -rw-r--r-- 1 boinc boinc     22413 Feb 26 09:43 stderr.txt
[2025-02-26 09:43:59] HITS file was successfully produced:
[2025-02-26 09:43:59] -rw------- 1 boinc boinc 186518585 Feb 26 09:43 shared/HITS.pool.root.1
[2025-02-26 09:43:59]  *** Contents of shared directory: ***
[2025-02-26 09:43:59] total 428751
[2025-02-26 09:43:59] -rw-r--r-- 2 boinc boinc 251671763 Feb 26 08:08 ATLAS.root_0
[2025-02-26 09:43:59] -rw-r--r-- 2 boinc boinc     17569 Feb 26 08:08 start_atlas.sh
[2025-02-26 09:43:59] -rw-r--r-- 2 boinc boinc    503552 Feb 26 08:08 input.tar.gz
[2025-02-26 09:43:59] -rw------- 1 boinc boinc 186518585 Feb 26 09:43 HITS.pool.root.1
[2025-02-26 09:43:59] -rw------- 1 boinc boinc    972800 Feb 26 09:43 result.tar.gz
09:44:00 (2025048): run_atlas exited; CPU time 50722.878544
09:44:00 (2025048): called boinc_finish(0)

</stderr_txt>
]]>

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