Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-02-26 02:08:22 (17433): Detected: vboxwrapper 26206
2025-02-26 02:08:22 (17433): Detected: BOINC client v8.1.0
2025-02-26 02:08:22 (17433): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-02-26 02:08:22 (17433): Successfully copied 'init_data.xml' to the shared directory.
2025-02-26 02:08:22 (17433): Create VM. (boinc_4eba01b521c51beb, slot#3)
2025-02-26 02:08:22 (17433): Setting Memory Size for VM. (4800MB)
2025-02-26 02:08:22 (17433): Setting CPU Count for VM. (8)
2025-02-26 02:08:22 (17433): Setting Chipset Options for VM.
2025-02-26 02:08:22 (17433): Setting Graphics Controller Options for VM.
2025-02-26 02:08:22 (17433): Setting Boot Options for VM.
2025-02-26 02:08:23 (17433): Setting Network Configuration for NAT.
2025-02-26 02:08:23 (17433): Enabling VM Network Access.
2025-02-26 02:08:23 (17433): Disabling USB Support for VM.
2025-02-26 02:08:23 (17433): Disabling COM Port Support for VM.
2025-02-26 02:08:23 (17433): Disabling LPT Port Support for VM.
2025-02-26 02:08:23 (17433): Disabling Audio Support for VM.
2025-02-26 02:08:23 (17433): Disabling Clipboard Support for VM.
2025-02-26 02:08:23 (17433): Disabling Drag and Drop Support for VM.
2025-02-26 02:08:23 (17433): Adding storage controller(s) to VM.
2025-02-26 02:08:23 (17433): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-02-26 02:08:23 (17433): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-02-26 02:08:23 (17433): forwarding host port 35393 to guest port 80
2025-02-26 02:08:23 (17433): Enabling remote desktop for VM.
2025-02-26 02:08:24 (17433): Required extension pack not installed, remote desktop not enabled.
2025-02-26 02:08:24 (17433): Enabling shared directory for VM.
2025-02-26 02:08:24 (17433): Starting VM using VBoxManage interface. (boinc_4eba01b521c51beb, slot#3)
2025-02-26 02:08:25 (17433): Successfully started VM. (PID = '17874')
2025-02-26 02:08:25 (17433): Reporting VM Process ID to BOINC.
2025-02-26 02:08:25 (17433): Guest Log: BIOS: VirtualBox 7.1.4
2025-02-26 02:08:25 (17433): Guest Log: CPUID EDX: 0x178bfbff
2025-02-26 02:08:25 (17433): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-02-26 02:08:25 (17433): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-02-26 02:08:25 (17433): VM state change detected. (old = 'poweredoff', new = 'running')
2025-02-26 02:08:25 (17433): Detected: Web Application Enabled (http://localhost:35393)
2025-02-26 02:08:25 (17433): Preference change detected
2025-02-26 02:08:25 (17433): Setting CPU throttle for VM. (100%)
2025-02-26 02:08:25 (17433): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-02-26 02:08:27 (17433): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-02-26 02:08:27 (17433): Guest Log: BIOS: Booting from Hard Disk...
2025-02-26 02:08:30 (17433): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-02-26 02:08:30 (17433): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-02-26 02:08:30 (17433): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-02-26 02:08:36 (17433): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-02-26 02:08:36 (17433): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-02-26 02:08:42 (17433): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-02-26 02:08:42 (17433): Guest Log: 00:00:00.000149 main     Log opened 2025-02-26T01:08:40.417873000Z
2025-02-26 02:08:42 (17433): Guest Log: 00:00:00.000256 main     OS Product: Linux
2025-02-26 02:08:42 (17433): Guest Log: 00:00:00.000297 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-02-26 02:08:42 (17433): Guest Log: 00:00:00.000326 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-02-26 02:08:42 (17433): Guest Log: 00:00:00.000360 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-02-26 02:08:42 (17433): Guest Log: 00:00:00.000361 main     Process ID: 1367
2025-02-26 02:08:42 (17433): Guest Log: 00:00:00.000362 main     Package type: LINUX_64BITS_GENERIC
2025-02-26 02:08:42 (17433): Guest Log: 00:00:00.001229 main     5.2.32 r132073 started. Verbose level = 0
2025-02-26 02:08:42 (17433): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-02-26 02:08:42 (17433): Guest Log: [INFO] Mounting shared directory
2025-02-26 02:08:42 (17433): Guest Log: [INFO] Checking for init_data.xml
2025-02-26 02:08:49 (17433): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-02-26 02:08:49 (17433): Guest Log: [INFO] Detected branch: prod
2025-02-26 02:08:49 (17433): Guest Log: This is the prod version of the ATLAS job wrapper
2025-02-26 02:08:49 (17433): Guest Log: Copying input files
2025-02-26 02:08:50 (17433): Guest Log: Copied input files into RunAtlas.
2025-02-26 02:08:50 (17433): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-02-26 02:08:50 (17433): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-02-26 02:08:50 (17433): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-02-26 02:08:50 (17433): Guest Log: Further information can be found at the LHC@home message board.
2025-02-26 02:08:58 (17433): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-02-26 02:08:58 (17433): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-02-26 02:08:58 (17433): Guest Log: 2.6.3.0 1649 0 30144 143057 4 1 3117296 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-02-26 02:08:59 (17433): Guest Log: copied the webapp to /var/www
2025-02-26 02:08:59 (17433): Guest Log: ATHENA_PROC_NUMBER=8
2025-02-26 02:08:59 (17433): Guest Log: ATHENA_CORE_NUMBER=8
2025-02-26 02:09:00 (17433): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-02-26 02:09:00 (17433): Guest Log:  *** Starting ATLAS job. (PandaID=6531065088 taskID=43401155) ***
2025-02-26 03:38:43 (17433): Guest Log:  *** Job finished ***
2025-02-26 03:38:43 (17433): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:29,171 | INFO     | [data] queue_monitor thread has finished
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:32,241 | INFO     | job.realtimelogging is not enabled
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:33,242 | INFO     | [payload] run_realtimelog thread has finished
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:33,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139789310388032)>', '<ExcThread(monitor, started 139788401227520)>']
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:34,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:34,324 | INFO     | [monitor] control thread has ended
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,417 | INFO     | all workflow threads have been joined
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,418 | INFO     | end of generic workflow (traces error code: 0)
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,418 | INFO     | traces error code: 0
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,500 [wrapper] ==== pilot stdout END ====
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,506 [wrapper] ==== wrapper stdout RESUME ====
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,511 [wrapper] pilotpid: 6011
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,517 [wrapper] Pilot exit status: 0
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,591 [wrapper] pandaids: 6531065088
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,632 [wrapper] cleanup supervisor_pilot 25469 6012
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,638 [wrapper] Test setup, not cleaning
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,649 [wrapper] apfmon messages muted
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,655 [wrapper] ==== wrapper stdout END ====
2025-02-26 03:38:43 (17433): Guest Log: 2025-02-26 02:38:38,660 [wrapper] ==== wrapper stderr END ====
2025-02-26 03:38:43 (17433): Guest Log:  *** Error codes and diagnostics ***
2025-02-26 03:38:43 (17433): Guest Log:     "exeErrorCode": 0,
2025-02-26 03:38:43 (17433): Guest Log:     "exeErrorDiag": "",
2025-02-26 03:38:43 (17433): Guest Log:     "pilotErrorCode": 0,
2025-02-26 03:38:43 (17433): Guest Log:     "pilotErrorDiag": "",
2025-02-26 03:38:43 (17433): Guest Log:  *** Listing of results directory ***
2025-02-26 03:38:43 (17433): Guest Log: total 187052
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 atlas atlas    491065 Feb 25 22:04 pilot3.tar.gz
2025-02-26 03:38:43 (17433): Guest Log: -rwx------. 1 atlas atlas     35865 Feb 25 22:25 runpilot2-wrapper.sh
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 atlas atlas      5118 Feb 25 22:26 queuedata.json
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Feb 26 01:08 start_atlas.sh
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 atlas atlas    503549 Feb 26 01:08 input.tar.gz
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 atlas atlas      7359 Feb 26 01:08 init_data.xml
2025-02-26 03:38:43 (17433): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 01:08 EVNT.43401153._000083.pool.root.1 -> /data/./ATLAS.root_0
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 atlas atlas      2539 Feb 26 01:08 pandaJob.out
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas       424 Feb 26 01:09 setup.sh.local
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas    987490 Feb 26 01:09 agis_schedconf.cvmfs.json
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas   1573632 Feb 26 01:09 agis_ddmendpoints.agis.ALL.json
2025-02-26 03:38:43 (17433): Guest Log: drwx------. 4 atlas atlas      4096 Feb 26 01:09 pilot3
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 02:37 pilot_heartbeat.json
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas 186337112 Feb 26 02:37 HITS.43401155._002063.pool.root.1
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas      1027 Feb 26 02:38 memory_monitor_summary.json
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas    304014 Feb 26 02:38 log.43401155._002063.job.log.tgz.1
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas      7688 Feb 26 02:38 heartbeat.json
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas      4849 Feb 26 02:38 pilotlog.txt
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas    437908 Feb 26 02:38 log.43401155._002063.job.log.1
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 02:38 output.list
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 02:38 runtime_log
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas    757760 Feb 26 02:38 result.tar.gz
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 atlas atlas     10916 Feb 26 02:38 runtime_log.err
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas       649 Feb 26 02:38 GntNDmdXI76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmiagKDmwYitin.diag
2025-02-26 03:38:43 (17433): Guest Log: Looking for outputfile HITS.43401155._002063.pool.root.1
2025-02-26 03:38:43 (17433): Guest Log: HITS file was successfully produced
2025-02-26 03:38:43 (17433): Guest Log: -rw-------. 1 atlas atlas 186337112 Feb 26 02:37 /home/atlas/RunAtlas/HITS.43401155._002063.pool.root.1
2025-02-26 03:38:43 (17433): Guest Log: Successfully finished the ATLAS job!
2025-02-26 03:38:43 (17433): Guest Log: Copying the results back to the shared directory!
2025-02-26 03:38:43 (17433): Guest Log:  *** Contents of shared directory: ***
2025-02-26 03:38:43 (17433): Guest Log: total 246272
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 root root 250890070 Feb 26 01:08 ATLAS.root_0
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 root root      7359 Feb 26 01:08 init_data.xml
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 root root    503549 Feb 26 01:08 input.tar.gz
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 root root    757760 Feb 26  2025 result.tar.gz
2025-02-26 03:38:43 (17433): Guest Log: -rw-r--r--. 1 root root     17569 Feb 26 01:08 start_atlas.sh
2025-02-26 03:38:43 (17433): Guest Log:  *** Success! Shutting down the machine. ***
2025-02-26 03:38:43 (17433): VM Completion File Detected.
2025-02-26 03:38:43 (17433): Powering off VM.
2025-02-26 03:38:44 (17433): Successfully stopped VM.
2025-02-26 03:38:44 (17433): Deregistering VM. (boinc_4eba01b521c51beb, slot#3)
2025-02-26 03:38:44 (17433): Removing network bandwidth throttle group from VM.
2025-02-26 03:38:44 (17433): Removing VM from VirtualBox.
03:38:49 (17433): called boinc_finish(0)

</stderr_txt>
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