Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
17:47:52 (66572): wrapper (7.7.26015): starting
17:47:52 (66572): wrapper: running run_atlas (--nthreads 4)
[2025-02-25 17:47:52] Arguments: --nthreads 4
[2025-02-25 17:47:52] Threads: 4
[2025-02-25 17:47:52] Checking for CVMFS
[2025-02-25 17:47:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 17:47:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 17:47:52] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 17:47:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 17:47:53] 2.12.4.4 2583511 707 60232 143056 1 187 3530005 4096000 10146 130560 0 6586390 99.999 280462 10438 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2025-02-25 17:47:53] CVMFS is ok
[2025-02-25 17:47:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 17:47:53] Checking for apptainer binary...
[2025-02-25 17:47:53] apptainer is not installed, using version from CVMFS
[2025-02-25 17:47:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 17:47:53] Starfish-Prime
[2025-02-25 17:47:53] apptainer works
[2025-02-25 17:47:53] Set ATHENA_PROC_NUMBER=4
[2025-02-25 17:47:53] Set ATHENA_CORE_NUMBER=4
[2025-02-25 17:47:53] Starting ATLAS job with PandaID=6531064902
[2025-02-25 17:47:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 21:35:52]  *** The last 200 lines of the pilot log: ***
[2025-02-25 21:35:52] 2025-02-26 03:35:38,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 21:35:52] 2025-02-26 03:35:38,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 21:35:52] 2025-02-26 03:35:38,670 | INFO     | fitting pss+swap vs Time
[2025-02-25 21:35:52] 2025-02-26 03:35:38,670 | INFO     | model: linear, x: [1740527309.0, 1740527370.0, 1740527431.0, 1740527492.0, 1740527553.0, 1740527614.0, 1740527675.0, 1740527736.0, 1740527797.0, 1740527858.0, 1740
[2025-02-25 21:35:52] 2025-02-26 03:35:38,670 | INFO     | sum of square deviations: 3485088600.0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,672 | INFO     | sum of deviations: 41875660670.5
[2025-02-25 21:35:52] 2025-02-26 03:35:38,672 | INFO     | mean x: 1740534110.5
[2025-02-25 21:35:52] 2025-02-26 03:35:38,672 | INFO     | mean y: 2280113.2991071427
[2025-02-25 21:35:52] 2025-02-26 03:35:38,672 | INFO     | -- intersect: -20911396456.280373
[2025-02-25 21:35:52] 2025-02-26 03:35:38,673 | INFO     | intersect: -20911396456.280373
[2025-02-25 21:35:52] 2025-02-26 03:35:38,673 | INFO     | chi2: 3.0166979912063536
[2025-02-25 21:35:52] 2025-02-26 03:35:38,673 | INFO     | model: linear, x: [1740527309.0, 1740527370.0, 1740527431.0, 1740527492.0, 1740527553.0, 1740527614.0, 1740527675.0, 1740527736.0, 1740527797.0, 1740527858.0, 1740
[2025-02-25 21:35:52] 2025-02-26 03:35:38,674 | INFO     | sum of square deviations: 3256879670.0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,675 | INFO     | sum of deviations: 54939979949.0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,675 | INFO     | mean x: 1740533958.0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,675 | INFO     | mean y: 2288672.2465753425
[2025-02-25 21:35:52] 2025-02-26 03:35:38,675 | INFO     | -- intersect: -29358605939.2125
[2025-02-25 21:35:52] 2025-02-26 03:35:38,676 | INFO     | intersect: -29358605939.2125
[2025-02-25 21:35:52] 2025-02-26 03:35:38,676 | INFO     | chi2: 2.2041602645243397
[2025-02-25 21:35:52] 2025-02-26 03:35:38,676 | INFO     | current chi2=2.2041602645243397 (change=26.934672580767245 %)
[2025-02-25 21:35:52] 2025-02-26 03:35:38,677 | INFO     | model: linear, x: [1740527309.0, 1740527370.0, 1740527431.0, 1740527492.0, 1740527553.0, 1740527614.0, 1740527675.0, 1740527736.0, 1740527797.0, 1740527858.0, 1740
[2025-02-25 21:35:52] 2025-02-26 03:35:38,677 | INFO     | sum of square deviations: 3038856977.5
[2025-02-25 21:35:52] 2025-02-26 03:35:38,678 | INFO     | sum of deviations: 53580459010.5
[2025-02-25 21:35:52] 2025-02-26 03:35:38,678 | INFO     | mean x: 1740533805.5
[2025-02-25 21:35:52] 2025-02-26 03:35:38,679 | INFO     | mean y: 2287721.079439252
[2025-02-25 21:35:52] 2025-02-26 03:35:38,679 | INFO     | -- intersect: -30686422182.834534
[2025-02-25 21:35:52] 2025-02-26 03:35:38,679 | INFO     | intersect: -30686422182.834534
[2025-02-25 21:35:52] 2025-02-26 03:35:38,679 | INFO     | chi2: 2.2048668222225687
[2025-02-25 21:35:52] 2025-02-26 03:35:38,679 | INFO     | current chi2=2.2048668222225687 (change=-0.032055640853388793 %)
[2025-02-25 21:35:52] 2025-02-26 03:35:38,679 | INFO     | right removable region: 213
[2025-02-25 21:35:52] 2025-02-26 03:35:38,680 | INFO     | model: linear, x: [1740527614.0, 1740527675.0, 1740527736.0, 1740527797.0, 1740527858.0, 1740527919.0, 1740527980.0, 1740528041.0, 1740528102.0, 1740528163.0, 1740
[2025-02-25 21:35:52] 2025-02-26 03:35:38,680 | INFO     | sum of square deviations: 3256879670.0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,682 | INFO     | sum of deviations: -5054337145.999998
[2025-02-25 21:35:52] 2025-02-26 03:35:38,682 | INFO     | mean x: 1740534263.0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,682 | INFO     | mean y: 2311331.6621004567
[2025-02-25 21:35:52] 2025-02-26 03:35:38,682 | INFO     | -- intersect: 2703438751.382409
[2025-02-25 21:35:52] 2025-02-26 03:35:38,682 | INFO     | intersect: 2703438751.382409
[2025-02-25 21:35:52] 2025-02-26 03:35:38,682 | INFO     | chi2: 0.8795298116709864
[2025-02-25 21:35:52] 2025-02-26 03:35:38,683 | INFO     | current chi2=0.8795298116709864 (change=70.84461837960552 %)
[2025-02-25 21:35:52] 2025-02-26 03:35:38,683 | INFO     | model: linear, x: [1740527919.0, 1740527980.0, 1740528041.0, 1740528102.0, 1740528163.0, 1740528224.0, 1740528285.0, 1740528346.0, 1740528407.0, 1740528468.0, 1740
[2025-02-25 21:35:52] 2025-02-26 03:35:38,683 | INFO     | sum of square deviations: 3038856977.5
[2025-02-25 21:35:52] 2025-02-26 03:35:38,685 | INFO     | sum of deviations: -9443107104.5
[2025-02-25 21:35:52] 2025-02-26 03:35:38,685 | INFO     | mean x: 1740534415.5
[2025-02-25 21:35:52] 2025-02-26 03:35:38,685 | INFO     | mean y: 2314359.5654205605
[2025-02-25 21:35:52] 2025-02-26 03:35:38,685 | INFO     | -- intersect: 5410944323.505474
[2025-02-25 21:35:52] 2025-02-26 03:35:38,685 | INFO     | intersect: 5410944323.505474
[2025-02-25 21:35:52] 2025-02-26 03:35:38,686 | INFO     | chi2: 0.8409139710948643
[2025-02-25 21:35:52] 2025-02-26 03:35:38,686 | INFO     | current chi2=0.8409139710948643 (change=4.390509572695129 %)
[2025-02-25 21:35:52] 2025-02-26 03:35:38,686 | INFO     | left removable region: 20
[2025-02-25 21:35:52] 2025-02-26 03:35:38,686 | INFO     | model: linear, x: [1740528529.0, 1740528590.0, 1740528651.0, 1740528712.0, 1740528773.0, 1740528834.0, 1740528895.0, 1740528956.0, 1740529017.0, 1740529078.0, 1740
[2025-02-25 21:35:52] 2025-02-26 03:35:38,686 | INFO     | sum of square deviations: 2229146912.0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,688 | INFO     | sum of deviations: 3827457687.9999995
[2025-02-25 21:35:52] 2025-02-26 03:35:38,688 | INFO     | mean x: 1740534385.0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,688 | INFO     | mean y: 2324100.1139896372
[2025-02-25 21:35:52] 2025-02-26 03:35:38,688 | INFO     | -- intersect: -2986183152.249914
[2025-02-25 21:35:52] 2025-02-26 03:35:38,688 | INFO     | intersect: -2986183152.249914
[2025-02-25 21:35:52] 2025-02-26 03:35:38,688 | INFO     | chi2: 0.0009083729570480353
[2025-02-25 21:35:52] 2025-02-26 03:35:38,689 | INFO     | -- intersect: -2986183152.249914
[2025-02-25 21:35:52] 2025-02-26 03:35:38,689 | INFO     | current memory leak: 1.72 B/s (using 193 data points, chi2=0.00)
[2025-02-25 21:35:52] 2025-02-26 03:35:38,689 | INFO     | ..............................
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | . Timing measurements:
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | . get job = 0 s
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | . initial setup = 3 s
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | . payload setup = 5 s
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | . stage-in = 0 s
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | . payload execution = 13619 s
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | . stage-out = 2 s
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | . log creation = 0 s
[2025-02-25 21:35:52] 2025-02-26 03:35:38,690 | INFO     | ..............................
[2025-02-25 21:35:52] 2025-02-26 03:35:38,791 | INFO     | 
[2025-02-25 21:35:52] 2025-02-26 03:35:38,791 | INFO     | job summary report
[2025-02-25 21:35:52] 2025-02-26 03:35:38,791 | INFO     | --------------------------------------------------
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | PanDA job id: 6531064902
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | task id: 43401155
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | errors: (none)
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | pilot state: finished 
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | transexitcode: 0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | exeerrorcode: 0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | exeerrordiag: 
[2025-02-25 21:35:52] 2025-02-26 03:35:38,792 | INFO     | exitcode: 0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | exitmsg: OK
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | cpuconsumptiontime: 52244 s
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | nevents: 400
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | neventsw: 0
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | pid: 77317
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | pgrp: 77317
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | corecount: 4
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | event service: False
[2025-02-25 21:35:52] 2025-02-26 03:35:38,793 | INFO     | sizes: {0: 2370215, 1: 2370414, 5: 2370620, 12: 2370676, 13628: 2400781, 13632: 2409736, 13633: 2409920, 13640: 2410090}
[2025-02-25 21:35:52] 2025-02-26 03:35:38,794 | INFO     | --------------------------------------------------
[2025-02-25 21:35:52] 2025-02-26 03:35:38,794 | INFO     | 
[2025-02-25 21:35:52] 2025-02-26 03:35:38,794 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-02-25 21:35:52] 2025-02-26 03:35:38,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,811 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,812 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,812 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 21:35:52] 2025-02-26 03:35:38,813 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,813 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 21:35:52] 2025-02-26 03:35:38,813 | INFO     | job 6531064902 has completed (purged errors)
[2025-02-25 21:35:52] 2025-02-26 03:35:38,813 | INFO     | overall cleanup function is called
[2025-02-25 21:35:52] 2025-02-26 03:35:39,820 | INFO     | --- collectZombieJob: --- 10, [77317]
[2025-02-25 21:35:52] 2025-02-26 03:35:39,820 | INFO     | zombie collector waiting for pid 77317
[2025-02-25 21:35:52] 2025-02-26 03:35:39,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 21:35:52] 2025-02-26 03:35:39,820 | INFO     | collected zombie processes
[2025-02-25 21:35:52] 2025-02-26 03:35:39,821 | INFO     | will attempt to kill all subprocesses of pid=77317
[2025-02-25 21:35:52] 2025-02-26 03:35:39,937 | INFO     | process IDs to be killed: [77317] (in reverse order)
[2025-02-25 21:35:52] 2025-02-26 03:35:40,040 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 21:35:52] 2025-02-26 03:35:40,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 21:35:52] 2025-02-26 03:35:40,049 | INFO     | did not find any defunct processes belonging to 77317
[2025-02-25 21:35:52] 2025-02-26 03:35:40,055 | INFO     | did not find any defunct processes belonging to 77317
[2025-02-25 21:35:52] 2025-02-26 03:35:40,056 | INFO     | ready for new job
[2025-02-25 21:35:52] 2025-02-26 03:35:40,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 21:35:52] 2025-02-26 03:35:40,058 | INFO     | **************************************
[2025-02-25 21:35:52] 2025-02-26 03:35:40,058 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 21:35:52] 2025-02-26 03:35:40,058 | INFO     | **************************************
[2025-02-25 21:35:52] 2025-02-26 03:35:40,058 | INFO     | 
[2025-02-25 21:35:52] 2025-02-26 03:35:40,079 | INFO     | architecture information:
[2025-02-25 21:35:52] 2025-02-26 03:35:40,079 | INFO     | executing command: cat /etc/os-release
[2025-02-25 21:35:52] 2025-02-26 03:35:40,093 | INFO     | cat /etc/os-release:
[2025-02-25 21:35:52] NAME="CentOS Linux"
[2025-02-25 21:35:52] VERSION="7 (Core)"
[2025-02-25 21:35:52] ID="centos"
[2025-02-25 21:35:52] ID_LIKE="rhel fedora"
[2025-02-25 21:35:52] VERSION_ID="7"
[2025-02-25 21:35:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 21:35:52] ANSI_COLOR="0;31"
[2025-02-25 21:35:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 21:35:52] HOME_URL="https://www.centos.org/"
[2025-02-25 21:35:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 21:35:52] 
[2025-02-25 21:35:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 21:35:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 21:35:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 21:35:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 21:35:52] 
[2025-02-25 21:35:52] 2025-02-26 03:35:40,093 | INFO     | **************************************
[2025-02-25 21:35:52] 2025-02-26 03:35:40,596 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-02-25 21:35:52] 2025-02-26 03:35:40,611 | INFO     | sufficient remaining disk space (57566822400 B)
[2025-02-25 21:35:52] 2025-02-26 03:35:40,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 21:35:52] 2025-02-26 03:35:40,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 21:35:52] 2025-02-26 03:35:40,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 21:35:52] 2025-02-26 03:35:40,612 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 21:35:52] 2025-02-26 03:35:40,612 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 21:35:52] 2025-02-26 03:35:40,612 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 21:35:52] 2025-02-26 03:35:40,612 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 21:35:52] 2025-02-26 03:35:40,687 | INFO     | all data control threads have been joined
[2025-02-25 21:35:52] 2025-02-26 03:35:41,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 21:35:52] 2025-02-26 03:35:41,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 21:35:52] 2025-02-26 03:35:41,404 | INFO     | aborting loop
[2025-02-25 21:35:52] 2025-02-26 03:35:41,612 | INFO     | all payload control threads have been joined
[2025-02-25 21:35:52] 2025-02-26 03:35:41,616 | INFO     | [job] retrieve thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:41,616 | INFO     | [job] queue monitor thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:41,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:41,692 | INFO     | [data] control thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,013 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,032 | INFO     | [data] copytool_in thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,036 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,105 | INFO     | all job control threads have been joined
[2025-02-25 21:35:52] 2025-02-26 03:35:42,132 | INFO     | [payload] failed_post thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 21:35:52] 2025-02-26 03:35:42,296 | INFO     | [job] validate thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,332 | INFO     | [payload] validate_post thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,408 | INFO     | [job] job monitor thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,615 | INFO     | [payload] control thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:42,836 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:43,018 | INFO     | [data] copytool_out thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:43,108 | INFO     | [job] control thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:46,155 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 21:35:52] 2025-02-26 03:35:47,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708520007488)>', '<ExcThread(monitor, started 140707943667456)>']
[2025-02-25 21:35:52] 2025-02-26 03:35:47,640 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 21:35:52] 2025-02-26 03:35:47,640 | INFO     | [monitor] control thread has ended
[2025-02-25 21:35:52] 2025-02-26 03:35:52,088 | INFO     | all workflow threads have been joined
[2025-02-25 21:35:52] 2025-02-26 03:35:52,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 21:35:52] 2025-02-26 03:35:52,088 | INFO     | traces error code: 0
[2025-02-25 21:35:52] 2025-02-26 03:35:52,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 21:35:52] 2025-02-26 03:35:52,197 [wrapper] ==== pilot stdout END ====
[2025-02-25 21:35:52] 2025-02-26 03:35:52,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 21:35:52] 2025-02-26 03:35:52,201 [wrapper] pilotpid: 70446
[2025-02-25 21:35:52] 2025-02-26 03:35:52,203 [wrapper] Pilot exit status: 0
[2025-02-25 21:35:52] 2025-02-26 03:35:52,211 [wrapper] pandaids: 6531064902
[2025-02-25 21:35:52] 2025-02-26 03:35:52,266 [wrapper] cleanup supervisor_pilot  532090 70447
[2025-02-25 21:35:52] 2025-02-26 03:35:52,269 [wrapper] Test setup, not cleaning
[2025-02-25 21:35:52] 2025-02-26 03:35:52,274 [wrapper] apfmon messages muted
[2025-02-25 21:35:52] 2025-02-26 03:35:52,276 [wrapper] ==== wrapper stdout END ====
[2025-02-25 21:35:52] 2025-02-26 03:35:52,278 [wrapper] ==== wrapper stderr END ====
[2025-02-25 21:35:52]  *** Error codes and diagnostics ***
[2025-02-25 21:35:52]     "exeErrorCode": 0,
[2025-02-25 21:35:52]     "exeErrorDiag": "",
[2025-02-25 21:35:52]     "pilotErrorCode": 0,
[2025-02-25 21:35:52]     "pilotErrorDiag": "",
[2025-02-25 21:35:52]  *** Listing of results directory ***
[2025-02-25 21:35:52] total 439700
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc    491065 Feb 25 16:04 pilot3.tar.gz
[2025-02-25 21:35:52] -rwx------ 1 boinc boinc     35865 Feb 25 16:25 runpilot2-wrapper.sh
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc      5118 Feb 25 16:26 queuedata.json
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc       100 Feb 25 17:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 21:35:52] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 17:47 run_atlas
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc       105 Feb 25 17:47 job.xml
[2025-02-25 21:35:52] -rw-r--r-- 2 boinc boinc     17569 Feb 25 17:47 start_atlas.sh
[2025-02-25 21:35:52] drwxrwx--x 2 boinc boinc      4096 Feb 25 17:47 shared
[2025-02-25 21:35:52] -rw-r--r-- 2 boinc boinc    503549 Feb 25 17:47 input.tar.gz
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc      9018 Feb 25 17:47 init_data.xml
[2025-02-25 21:35:52] -rw-r--r-- 2 boinc boinc 255050365 Feb 25 17:47 EVNT.43401153._000076.pool.root.1
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc         0 Feb 25 17:47 boinc_lockfile
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc      2538 Feb 25 17:47 pandaJob.out
[2025-02-25 21:35:52] -rw------- 1 boinc boinc       459 Feb 25 17:47 setup.sh.local
[2025-02-25 21:35:52] -rw------- 1 boinc boinc    987490 Feb 25 17:48 agis_schedconf.cvmfs.json
[2025-02-25 21:35:52] drwx------ 4 boinc boinc      4096 Feb 25 17:48 pilot3
[2025-02-25 21:35:52] -rw------- 1 boinc boinc 187956866 Feb 25 21:34 HITS.43401155._001877.pool.root.1
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc       531 Feb 25 21:34 boinc_task_state.xml
[2025-02-25 21:35:52] -rw------- 1 boinc boinc        95 Feb 25 21:35 pilot_heartbeat.json
[2025-02-25 21:35:52] -rw------- 1 boinc boinc      1034 Feb 25 21:35 memory_monitor_summary.json
[2025-02-25 21:35:52] -rw------- 1 boinc boinc   1573632 Feb 25 21:35 agis_ddmendpoints.agis.ALL.json
[2025-02-25 21:35:52] -rw------- 1 boinc boinc    327455 Feb 25 21:35 log.43401155._001877.job.log.tgz.1
[2025-02-25 21:35:52] -rw------- 1 boinc boinc      7713 Feb 25 21:35 heartbeat.json
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc      8192 Feb 25 21:35 boinc_mmap_file
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc        28 Feb 25 21:35 wrapper_checkpoint.txt
[2025-02-25 21:35:52] -rw------- 1 boinc boinc      4345 Feb 25 21:35 pilotlog.txt
[2025-02-25 21:35:52] -rw------- 1 boinc boinc   1394411 Feb 25 21:35 log.43401155._001877.job.log.1
[2025-02-25 21:35:52] -rw------- 1 boinc boinc       357 Feb 25 21:35 output.list
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc       620 Feb 25 21:35 runtime_log
[2025-02-25 21:35:52] -rw------- 1 boinc boinc   1740800 Feb 25 21:35 result.tar.gz
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc     11486 Feb 25 21:35 runtime_log.err
[2025-02-25 21:35:52] -rw------- 1 boinc boinc       654 Feb 25 21:35 Fk1MDmbXI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvLxKDmU6yaam.diag
[2025-02-25 21:35:52] -rw-r--r-- 1 boinc boinc     21258 Feb 25 21:35 stderr.txt
[2025-02-25 21:35:52] HITS file was successfully produced:
[2025-02-25 21:35:52] -rw------- 1 boinc boinc 187956866 Feb 25 21:34 shared/HITS.pool.root.1
[2025-02-25 21:35:52]  *** Contents of shared directory: ***
[2025-02-25 21:35:52] total 434848
[2025-02-25 21:35:52] -rw-r--r-- 2 boinc boinc     17569 Feb 25 17:47 start_atlas.sh
[2025-02-25 21:35:52] -rw-r--r-- 2 boinc boinc    503549 Feb 25 17:47 input.tar.gz
[2025-02-25 21:35:52] -rw-r--r-- 2 boinc boinc 255050365 Feb 25 17:47 ATLAS.root_0
[2025-02-25 21:35:52] -rw------- 1 boinc boinc 187956866 Feb 25 21:34 HITS.pool.root.1
[2025-02-25 21:35:52] -rw------- 1 boinc boinc   1740800 Feb 25 21:35 result.tar.gz
21:35:53 (66572): run_atlas exited; CPU time 52251.234471
21:35:53 (66572): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN