Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
06:34:54 (1649870): wrapper (7.7.26015): starting
06:34:54 (1649870): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 06:34:54] Arguments: --nthreads 12
[2025-02-26 06:34:54] Threads: 12
[2025-02-26 06:34:54] Checking for CVMFS
[2025-02-26 06:34:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 06:34:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 06:34:54] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 06:34:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 06:34:54] 2.12.6.0 1166473 881 61800 143056 0 186 5216819 6291457 4385 130560 0 3298280 99.879 714390 293 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.11.5:3128 1
[2025-02-26 06:34:54] CVMFS is ok
[2025-02-26 06:34:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 06:34:54] Checking for apptainer binary...
[2025-02-26 06:34:54] apptainer is not installed, using version from CVMFS
[2025-02-26 06:34:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 06:34:54] pm111
[2025-02-26 06:34:54] apptainer works
[2025-02-26 06:34:54] Set ATHENA_PROC_NUMBER=12
[2025-02-26 06:34:54] Set ATHENA_CORE_NUMBER=12
[2025-02-26 06:34:54] Starting ATLAS job with PandaID=6531062503
[2025-02-26 06:34:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 07:59:31]  *** The last 200 lines of the pilot log: ***
[2025-02-26 07:59:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 07:59:31]  is_altstaged=None
[2025-02-26 07:59:31]  is_tar=False
[2025-02-26 07:59:31]  lfn=log.43401155._001412.job.log.tgz.1
[2025-02-26 07:59:31]  mtime=0
[2025-02-26 07:59:31]  protocol_id=None
[2025-02-26 07:59:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 07:59:31]  replicas=None
[2025-02-26 07:59:31]  scope=mc23_13p6TeV
[2025-02-26 07:59:31]  status=None
[2025-02-26 07:59:31]  status_code=0
[2025-02-26 07:59:31]  storage_token=
[2025-02-26 07:59:31]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6531062503/log.43401155._001412.job.log.tgz.1
[2025-02-26 07:59:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/0f/log.43401155._001412.job.log.tgz.1
[2025-02-26 07:59:31]  workdir=None
[2025-02-26 07:59:31] ]
[2025-02-26 07:59:31] 2025-02-26 00:59:05,523 | INFO     | transferring file log.43401155._001412.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6531062503/log.43401155._001412.job.log.tgz.1 to /var/lib/boinc
[2025-02-26 07:59:31] 2025-02-26 00:59:05,524 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6531062503/log.43401155._001412.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.434011
[2025-02-26 07:59:31] 2025-02-26 00:59:05,539 | INFO     | adding to output.list: log.43401155._001412.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/0f/log.43401155._001412.job.log.tg
[2025-02-26 07:59:31] 2025-02-26 00:59:05,540 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 07:59:31] 2025-02-26 00:59:05,540 | INFO     | summary of transferred files:
[2025-02-26 07:59:31] 2025-02-26 00:59:05,540 | INFO     |  -- lfn=log.43401155._001412.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 07:59:31] 2025-02-26 00:59:05,541 | INFO     | stage-out finished correctly
[2025-02-26 07:59:31] 2025-02-26 00:59:06,680 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 07:59:31] 2025-02-26 00:59:06,779 | INFO     | job 6531062503 has state=finished
[2025-02-26 07:59:31] 2025-02-26 00:59:06,779 | INFO     | preparing for final server update for job 6531062503 in state='finished'
[2025-02-26 07:59:31] 2025-02-26 00:59:06,780 | INFO     | this job has now completed (state=finished)
[2025-02-26 07:59:31] 2025-02-26 00:59:06,780 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 07:59:31] 2025-02-26 00:59:06,780 | INFO     | log transfer has been attempted: DONE
[2025-02-26 07:59:31] 2025-02-26 00:59:06,780 | INFO     | job 6531062503 has finished - writing final server update
[2025-02-26 07:59:31] 2025-02-26 00:59:06,781 | INFO     | total number of processed events: 400 (read)
[2025-02-26 07:59:31] 2025-02-26 00:59:06,785 | INFO     | executing command: lscpu
[2025-02-26 07:59:31] 2025-02-26 00:59:06,838 | INFO     | found 36 cores (18 cores per socket, 2 sockets)
[2025-02-26 07:59:31] 2025-02-26 00:59:06,864 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 07:59:31] 2025-02-26 00:59:07,106 | INFO     | monitor loop #375: job 0:6531062503 is in state 'finished'
[2025-02-26 07:59:31] 2025-02-26 00:59:07,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 07:59:31] 2025-02-26 00:59:07,405 | INFO     | PID=1653975 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-02-26 07:59:31] 2025-02-26 00:59:07,405 | INFO     | .. there are 6 such processes running
[2025-02-26 07:59:31] 2025-02-26 00:59:09,609 | INFO     | monitor loop #376: job 0:6531062503 is in state 'finished'
[2025-02-26 07:59:31] 2025-02-26 00:59:09,610 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 07:59:31] 2025-02-26 00:59:11,269 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 07:59:31] 2025-02-26 00:59:11,269 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6531062503/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 07:59:31] 2025-02-26 00:59:11,271 | INFO     | extracted standard info from prmon json
[2025-02-26 07:59:31] 2025-02-26 00:59:11,271 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 07:59:31] 2025-02-26 00:59:11,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 07:59:31] 2025-02-26 00:59:11,271 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 07:59:31] 2025-02-26 00:59:11,271 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 07:59:31] 2025-02-26 00:59:11,274 | INFO     | fitting pss+swap vs Time
[2025-02-26 07:59:31] 2025-02-26 00:59:11,274 | INFO     | model: linear, x: [1740526829.0, 1740526890.0, 1740526951.0, 1740527012.0, 1740527073.0, 1740527134.0, 1740527195.0, 1740527256.0, 1740527317.0, 1740527378.0, 1740
[2025-02-26 07:59:31] 2025-02-26 00:59:11,274 | INFO     | sum of square deviations: 136095575.0
[2025-02-26 07:59:31] 2025-02-26 00:59:11,275 | INFO     | sum of deviations: 5356276715.0
[2025-02-26 07:59:31] 2025-02-26 00:59:11,275 | INFO     | mean x: 1740529116.5
[2025-02-26 07:59:31] 2025-02-26 00:59:11,275 | INFO     | mean y: 2680885.4210526315
[2025-02-26 07:59:31] 2025-02-26 00:59:11,276 | INFO     | -- intersect: -68498852529.52261
[2025-02-26 07:59:31] 2025-02-26 00:59:11,276 | INFO     | intersect: -68498852529.52261
[2025-02-26 07:59:31] 2025-02-26 00:59:11,276 | INFO     | chi2: 0.2390673948733164
[2025-02-26 07:59:31] 2025-02-26 00:59:11,276 | INFO     | -- intersect: -68498852529.52261
[2025-02-26 07:59:31] 2025-02-26 00:59:11,276 | INFO     | current memory leak: 39.36 B/s (using 76 data points, chi2=0.24)
[2025-02-26 07:59:31] 2025-02-26 00:59:11,277 | INFO     | ..............................
[2025-02-26 07:59:31] 2025-02-26 00:59:11,277 | INFO     | . Timing measurements:
[2025-02-26 07:59:31] 2025-02-26 00:59:11,277 | INFO     | . get job = 0 s
[2025-02-26 07:59:31] 2025-02-26 00:59:11,277 | INFO     | . initial setup = 3 s
[2025-02-26 07:59:31] 2025-02-26 00:59:11,278 | INFO     | . payload setup = 3 s
[2025-02-26 07:59:31] 2025-02-26 00:59:11,278 | INFO     | . stage-in = 0 s
[2025-02-26 07:59:31] 2025-02-26 00:59:11,278 | INFO     | . payload execution = 5022 s
[2025-02-26 07:59:31] 2025-02-26 00:59:11,278 | INFO     | . stage-out = 1 s
[2025-02-26 07:59:31] 2025-02-26 00:59:11,278 | INFO     | . log creation = 0 s
[2025-02-26 07:59:31] 2025-02-26 00:59:11,278 | INFO     | ..............................
[2025-02-26 07:59:31] 2025-02-26 00:59:11,390 | INFO     | 
[2025-02-26 07:59:31] 2025-02-26 00:59:11,390 | INFO     | job summary report
[2025-02-26 07:59:31] 2025-02-26 00:59:11,390 | INFO     | --------------------------------------------------
[2025-02-26 07:59:31] 2025-02-26 00:59:11,391 | INFO     | PanDA job id: 6531062503
[2025-02-26 07:59:31] 2025-02-26 00:59:11,391 | INFO     | task id: 43401155
[2025-02-26 07:59:31] 2025-02-26 00:59:11,391 | INFO     | errors: (none)
[2025-02-26 07:59:31] 2025-02-26 00:59:11,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 07:59:31] 2025-02-26 00:59:11,391 | INFO     | pilot state: finished 
[2025-02-26 07:59:31] 2025-02-26 00:59:11,391 | INFO     | transexitcode: 0
[2025-02-26 07:59:31] 2025-02-26 00:59:11,392 | INFO     | exeerrorcode: 0
[2025-02-26 07:59:31] 2025-02-26 00:59:11,392 | INFO     | exeerrordiag: 
[2025-02-26 07:59:31] 2025-02-26 00:59:11,392 | INFO     | exitcode: 0
[2025-02-26 07:59:31] 2025-02-26 00:59:11,392 | INFO     | exitmsg: OK
[2025-02-26 07:59:31] 2025-02-26 00:59:11,392 | INFO     | cpuconsumptiontime: 51402 s
[2025-02-26 07:59:31] 2025-02-26 00:59:11,392 | INFO     | nevents: 400
[2025-02-26 07:59:31] 2025-02-26 00:59:11,392 | INFO     | neventsw: 0
[2025-02-26 07:59:31] 2025-02-26 00:59:11,392 | INFO     | pid: 1662021
[2025-02-26 07:59:31] 2025-02-26 00:59:11,393 | INFO     | pgrp: 1662021
[2025-02-26 07:59:31] 2025-02-26 00:59:11,393 | INFO     | corecount: 12
[2025-02-26 07:59:31] 2025-02-26 00:59:11,393 | INFO     | event service: False
[2025-02-26 07:59:31] 2025-02-26 00:59:11,393 | INFO     | sizes: {0: 2370388, 3: 2370594, 11: 2370622, 5026: 2396850, 5028: 2405805, 5029: 2405861, 5034: 2406159}
[2025-02-26 07:59:31] 2025-02-26 00:59:11,393 | INFO     | --------------------------------------------------
[2025-02-26 07:59:31] 2025-02-26 00:59:11,393 | INFO     | 
[2025-02-26 07:59:31] 2025-02-26 00:59:11,393 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-02-26 07:59:31] 2025-02-26 00:59:11,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,413 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,413 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,414 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,414 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,414 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,415 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,415 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,415 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 07:59:31] 2025-02-26 00:59:11,415 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 07:59:31] 2025-02-26 00:59:11,416 | INFO     | job 6531062503 has completed (purged errors)
[2025-02-26 07:59:31] 2025-02-26 00:59:11,416 | INFO     | overall cleanup function is called
[2025-02-26 07:59:31] 2025-02-26 00:59:12,424 | INFO     | --- collectZombieJob: --- 10, [1662021]
[2025-02-26 07:59:31] 2025-02-26 00:59:12,424 | INFO     | zombie collector waiting for pid 1662021
[2025-02-26 07:59:31] 2025-02-26 00:59:12,424 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 07:59:31] 2025-02-26 00:59:12,425 | INFO     | collected zombie processes
[2025-02-26 07:59:31] 2025-02-26 00:59:12,425 | INFO     | will attempt to kill all subprocesses of pid=1662021
[2025-02-26 07:59:31] 2025-02-26 00:59:12,540 | INFO     | process IDs to be killed: [1662021] (in reverse order)
[2025-02-26 07:59:31] 2025-02-26 00:59:12,646 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 07:59:31] 2025-02-26 00:59:12,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 07:59:31] 2025-02-26 00:59:12,656 | INFO     | did not find any defunct processes belonging to 1662021
[2025-02-26 07:59:31] 2025-02-26 00:59:12,666 | INFO     | did not find any defunct processes belonging to 1662021
[2025-02-26 07:59:31] 2025-02-26 00:59:12,666 | INFO     | ready for new job
[2025-02-26 07:59:31] 2025-02-26 00:59:12,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 07:59:31] 2025-02-26 00:59:12,668 | INFO     | **************************************
[2025-02-26 07:59:31] 2025-02-26 00:59:12,668 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 07:59:31] 2025-02-26 00:59:12,668 | INFO     | **************************************
[2025-02-26 07:59:31] 2025-02-26 00:59:12,668 | INFO     | 
[2025-02-26 07:59:31] 2025-02-26 00:59:12,672 | INFO     | architecture information:
[2025-02-26 07:59:31] 2025-02-26 00:59:12,673 | INFO     | executing command: cat /etc/os-release
[2025-02-26 07:59:31] 2025-02-26 00:59:12,685 | INFO     | cat /etc/os-release:
[2025-02-26 07:59:31] NAME="CentOS Linux"
[2025-02-26 07:59:31] VERSION="7 (Core)"
[2025-02-26 07:59:31] ID="centos"
[2025-02-26 07:59:31] ID_LIKE="rhel fedora"
[2025-02-26 07:59:31] VERSION_ID="7"
[2025-02-26 07:59:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 07:59:31] ANSI_COLOR="0;31"
[2025-02-26 07:59:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 07:59:31] HOME_URL="https://www.centos.org/"
[2025-02-26 07:59:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 07:59:31] 
[2025-02-26 07:59:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 07:59:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 07:59:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 07:59:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 07:59:31] 
[2025-02-26 07:59:31] 2025-02-26 00:59:12,686 | INFO     | **************************************
[2025-02-26 07:59:31] 2025-02-26 00:59:13,188 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-02-26 07:59:31] 2025-02-26 00:59:13,205 | INFO     | sufficient remaining disk space (1727839338496 B)
[2025-02-26 07:59:31] 2025-02-26 00:59:13,206 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 07:59:31] 2025-02-26 00:59:13,206 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 07:59:31] 2025-02-26 00:59:13,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 07:59:31] 2025-02-26 00:59:13,206 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 07:59:31] 2025-02-26 00:59:13,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 07:59:31] 2025-02-26 00:59:13,207 | INFO     | aborting loop
[2025-02-26 07:59:31] 2025-02-26 00:59:13,421 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 07:59:31] 2025-02-26 00:59:13,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 07:59:31] 2025-02-26 00:59:13,422 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 07:59:31] 2025-02-26 00:59:13,424 | INFO     | all payload control threads have been joined
[2025-02-26 07:59:31] 2025-02-26 00:59:13,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 07:59:31] 2025-02-26 00:59:13,989 | INFO     | all job control threads have been joined
[2025-02-26 07:59:31] 2025-02-26 00:59:14,082 | INFO     | all data control threads have been joined
[2025-02-26 07:59:31] 2025-02-26 00:59:14,209 | INFO     | [job] queue monitor thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:14,211 | INFO     | [job] retrieve thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:14,212 | INFO     | [job] job monitor thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:14,383 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:14,430 | INFO     | [payload] control thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:14,799 | INFO     | [payload] validate_post thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:14,995 | INFO     | [job] control thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:15,087 | INFO     | [data] control thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:15,402 | INFO     | [job] validate thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:15,485 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:15,532 | INFO     | [payload] failed_post thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:15,558 | INFO     | [data] copytool_in thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:15,595 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:15,620 | INFO     | [data] copytool_out thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:17,213 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:24,093 | INFO     | job.realtimelogging is not enabled
[2025-02-26 07:59:31] 2025-02-26 00:59:25,098 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 07:59:31] 2025-02-26 00:59:26,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128455360735040)>', '<ExcThread(monitor, started 128454932563712)>']
[2025-02-26 07:59:31] 2025-02-26 00:59:26,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 07:59:31] 2025-02-26 00:59:26,487 | INFO     | [monitor] control thread has ended
[2025-02-26 07:59:31] 2025-02-26 00:59:31,042 | INFO     | all workflow threads have been joined
[2025-02-26 07:59:31] 2025-02-26 00:59:31,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 07:59:31] 2025-02-26 00:59:31,043 | INFO     | traces error code: 0
[2025-02-26 07:59:31] 2025-02-26 00:59:31,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 07:59:31] 2025-02-26 00:59:31,161 [wrapper] ==== pilot stdout END ====
[2025-02-26 07:59:31] 2025-02-26 00:59:31,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 07:59:31] 2025-02-26 00:59:31,167 [wrapper] pilotpid: 1653975
[2025-02-26 07:59:31] 2025-02-26 00:59:31,169 [wrapper] Pilot exit status: 0
[2025-02-26 07:59:31] 2025-02-26 00:59:31,179 [wrapper] pandaids: 6531062503
[2025-02-26 07:59:31] 2025-02-26 00:59:31,240 [wrapper] cleanup supervisor_pilot 1902831 1653976
[2025-02-26 07:59:31] ./runpilot2-wrapper.sh: line 613: 1902831 Terminated              sleep 900
[2025-02-26 07:59:31] 2025-02-26 00:59:31,245 [wrapper] Test setup, not cleaning
[2025-02-26 07:59:31] 2025-02-26 00:59:31,250 [wrapper] apfmon messages muted
[2025-02-26 07:59:31] 2025-02-26 00:59:31,252 [wrapper] ==== wrapper stdout END ====
[2025-02-26 07:59:31] 2025-02-26 00:59:31,254 [wrapper] ==== wrapper stderr END ====
[2025-02-26 07:59:31]  *** Error codes and diagnostics ***
[2025-02-26 07:59:31]     "exeErrorCode": 0,
[2025-02-26 07:59:31]     "exeErrorDiag": "",
[2025-02-26 07:59:31]     "pilotErrorCode": 0,
[2025-02-26 07:59:31]     "pilotErrorDiag": "",
[2025-02-26 07:59:31]  *** Listing of results directory ***
[2025-02-26 07:59:31] total 424397
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc    491065 Feb 26 05:04 pilot3.tar.gz
[2025-02-26 07:59:31] -rwx------ 1 boinc boinc     35865 Feb 26 05:25 runpilot2-wrapper.sh
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc      5118 Feb 26 05:26 queuedata.json
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc       100 Feb 26 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 07:59:31] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 06:34 run_atlas
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc       105 Feb 26 06:34 job.xml
[2025-02-26 07:59:31] -rw-r--r-- 2 boinc boinc 248392072 Feb 26 06:34 EVNT.43401153._000057.pool.root.1
[2025-02-26 07:59:31] -rw-r--r-- 2 boinc boinc     17569 Feb 26 06:34 start_atlas.sh
[2025-02-26 07:59:31] drwxrwx--x 2 boinc boinc         5 Feb 26 06:34 shared
[2025-02-26 07:59:31] -rw-r--r-- 2 boinc boinc    503550 Feb 26 06:34 input.tar.gz
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc      6807 Feb 26 06:34 init_data.xml
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc         0 Feb 26 06:34 boinc_lockfile
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc      2539 Feb 26 06:34 pandaJob.out
[2025-02-26 07:59:31] -rw------- 1 boinc boinc       459 Feb 26 06:34 setup.sh.local
[2025-02-26 07:59:31] -rw------- 1 boinc boinc    987490 Feb 26 06:35 agis_schedconf.cvmfs.json
[2025-02-26 07:59:31] -rw------- 1 boinc boinc   1573632 Feb 26 06:35 agis_ddmendpoints.agis.ALL.json
[2025-02-26 07:59:31] drwx------ 4 boinc boinc        20 Feb 26 06:35 pilot3
[2025-02-26 07:59:31] -rw------- 1 boinc boinc        95 Feb 26 07:58 pilot_heartbeat.json
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc       529 Feb 26 07:58 boinc_task_state.xml
[2025-02-26 07:59:31] -rw------- 1 boinc boinc 183889575 Feb 26 07:58 HITS.43401155._001412.pool.root.1
[2025-02-26 07:59:31] -rw------- 1 boinc boinc      1042 Feb 26 07:59 memory_monitor_summary.json
[2025-02-26 07:59:31] -rw------- 1 boinc boinc    367970 Feb 26 07:59 log.43401155._001412.job.log.tgz.1
[2025-02-26 07:59:31] -rw------- 1 boinc boinc      7710 Feb 26 07:59 heartbeat.json
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc      8192 Feb 26 07:59 boinc_mmap_file
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc        27 Feb 26 07:59 wrapper_checkpoint.txt
[2025-02-26 07:59:31] -rw------- 1 boinc boinc      4296 Feb 26 07:59 pilotlog.txt
[2025-02-26 07:59:31] -rw------- 1 boinc boinc    496572 Feb 26 07:59 log.43401155._001412.job.log.1
[2025-02-26 07:59:31] -rw------- 1 boinc boinc       357 Feb 26 07:59 output.list
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc       620 Feb 26 07:59 runtime_log
[2025-02-26 07:59:31] -rw------- 1 boinc boinc    880640 Feb 26 07:59 result.tar.gz
[2025-02-26 07:59:31] -rw------- 1 boinc boinc       649 Feb 26 07:59 vHRLDmUXI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmsKxKDm8cBJYm.diag
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc     11454 Feb 26 07:59 runtime_log.err
[2025-02-26 07:59:31] -rw-r--r-- 1 boinc boinc     21266 Feb 26 07:59 stderr.txt
[2025-02-26 07:59:31] HITS file was successfully produced:
[2025-02-26 07:59:31] -rw------- 1 boinc boinc 183889575 Feb 26 07:58 shared/HITS.pool.root.1
[2025-02-26 07:59:31]  *** Contents of shared directory: ***
[2025-02-26 07:59:31] total 422967
[2025-02-26 07:59:31] -rw-r--r-- 2 boinc boinc 248392072 Feb 26 06:34 ATLAS.root_0
[2025-02-26 07:59:31] -rw-r--r-- 2 boinc boinc     17569 Feb 26 06:34 start_atlas.sh
[2025-02-26 07:59:31] -rw-r--r-- 2 boinc boinc    503550 Feb 26 06:34 input.tar.gz
[2025-02-26 07:59:31] -rw------- 1 boinc boinc 183889575 Feb 26 07:58 HITS.pool.root.1
[2025-02-26 07:59:31] -rw------- 1 boinc boinc    880640 Feb 26 07:59 result.tar.gz
07:59:32 (1649870): run_atlas exited; CPU time 51415.322565
07:59:32 (1649870): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN