Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:22:31 (3087228): wrapper (7.7.26015): starting
20:22:31 (3087228): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 20:22:31] Arguments: --nthreads 12
[2025-02-25 20:22:31] Threads: 12
[2025-02-25 20:22:31] Checking for CVMFS
[2025-02-25 20:22:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 20:22:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 20:22:31] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 20:22:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 20:22:32] 2.11.5.0 2722141 32818 331568 143063 2 108 30840297 45568001 7477 130560 0 175198238 99.604 231617862 26570 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-02-25 20:22:32] CVMFS is ok
[2025-02-25 20:22:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 20:22:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 20:22:32] Further information can be found at the LHC@home message board.
[2025-02-25 20:22:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 20:22:32] Checking for apptainer binary...
[2025-02-25 20:22:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 20:22:32] Running /usr/bin/apptainer --version
[2025-02-25 20:22:32] apptainer version 1.3.5-1.el9
[2025-02-25 20:22:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 20:22:32] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0027.triumf.lcg
[2025-02-25 20:22:32] apptainer works
[2025-02-25 20:22:32] Set ATHENA_PROC_NUMBER=12
[2025-02-25 20:22:32] Set ATHENA_CORE_NUMBER=12
[2025-02-25 20:22:32] Starting ATLAS job with PandaID=6531064899
[2025-02-25 20:22:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 21:26:47]  *** The last 200 lines of the pilot log: ***
[2025-02-25 21:26:47]  is_tar=False
[2025-02-25 21:26:47]  lfn=log.43401155._001874.job.log.tgz.1
[2025-02-25 21:26:47]  mtime=0
[2025-02-25 21:26:47]  protocol_id=None
[2025-02-25 21:26:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 21:26:47]  replicas=None
[2025-02-25 21:26:47]  scope=mc23_13p6TeV
[2025-02-25 21:26:47]  status=None
[2025-02-25 21:26:47]  status_code=0
[2025-02-25 21:26:47]  storage_token=
[2025-02-25 21:26:47]  surl=/home/boinc/slots/0/PanDA_Pilot-6531064899/log.43401155._001874.job.log.tgz.1
[2025-02-25 21:26:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/07/log.43401155._001874.job.log.tgz.1
[2025-02-25 21:26:47]  workdir=None
[2025-02-25 21:26:47] ]
[2025-02-25 21:26:47] 2025-02-26 05:26:22,796 | INFO     | transferring file log.43401155._001874.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6531064899/log.43401155._001874.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-02-25 21:26:47] 2025-02-26 05:26:22,796 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6531064899/log.43401155._001874.job.log.tgz.1 /home/boinc/slots/0/log.43401155._001874.job.log.t
[2025-02-25 21:26:47] 2025-02-26 05:26:22,809 | INFO     | adding to output.list: log.43401155._001874.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4a/07/log.43401155._001874.job.log.tg
[2025-02-25 21:26:47] 2025-02-26 05:26:22,810 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 21:26:47] 2025-02-26 05:26:22,810 | INFO     | summary of transferred files:
[2025-02-25 21:26:47] 2025-02-26 05:26:22,810 | INFO     |  -- lfn=log.43401155._001874.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 21:26:47] 2025-02-26 05:26:22,810 | INFO     | stage-out finished correctly
[2025-02-25 21:26:47] 2025-02-26 05:26:22,925 | INFO     | PID=3090948 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 21:26:47] 2025-02-26 05:26:22,925 | INFO     | .. there are 21 such processes running
[2025-02-25 21:26:47] 2025-02-26 05:26:24,821 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 21:26:47] 2025-02-26 05:26:24,870 | INFO     | job 6531064899 has state=finished
[2025-02-25 21:26:47] 2025-02-26 05:26:24,870 | INFO     | preparing for final server update for job 6531064899 in state='finished'
[2025-02-25 21:26:47] 2025-02-26 05:26:24,870 | INFO     | this job has now completed (state=finished)
[2025-02-25 21:26:47] 2025-02-26 05:26:24,870 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 21:26:47] 2025-02-26 05:26:24,871 | INFO     | log transfer has been attempted: DONE
[2025-02-25 21:26:47] 2025-02-26 05:26:24,871 | INFO     | job 6531064899 has finished - writing final server update
[2025-02-25 21:26:47] 2025-02-26 05:26:24,871 | INFO     | total number of processed events: 400 (read)
[2025-02-25 21:26:47] 2025-02-26 05:26:24,873 | INFO     | executing command: lscpu
[2025-02-25 21:26:47] 2025-02-26 05:26:24,906 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-25 21:26:47] 2025-02-26 05:26:24,918 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 21:26:47] 2025-02-26 05:26:27,606 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 21:26:47] 2025-02-26 05:26:27,607 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6531064899/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 21:26:47] 2025-02-26 05:26:27,611 | INFO     | extracted standard info from prmon json
[2025-02-25 21:26:47] 2025-02-26 05:26:27,612 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 21:26:47] 2025-02-26 05:26:27,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 21:26:47] 2025-02-26 05:26:27,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 21:26:47] 2025-02-26 05:26:27,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 21:26:47] 2025-02-26 05:26:27,614 | INFO     | fitting pss+swap vs Time
[2025-02-25 21:26:47] 2025-02-26 05:26:27,614 | INFO     | model: linear, x: [1740544101.0, 1740544162.0, 1740544223.0, 1740544284.0, 1740544345.0, 1740544406.0, 1740544467.0, 1740544528.0, 1740544589.0, 1740544650.0, 1740
[2025-02-25 21:26:47] 2025-02-26 05:26:27,614 | INFO     | sum of square deviations: 54443359.35714283
[2025-02-25 21:26:47] 2025-02-26 05:26:27,614 | INFO     | sum of deviations: 12828777597.571419
[2025-02-25 21:26:47] 2025-02-26 05:26:27,614 | INFO     | mean x: 1740545778.607143
[2025-02-25 21:26:47] 2025-02-26 05:26:27,614 | INFO     | mean y: 2763481.0714285714
[2025-02-25 21:26:47] 2025-02-26 05:26:27,614 | INFO     | -- intersect: -410131272254.42365
[2025-02-25 21:26:47] 2025-02-26 05:26:27,614 | INFO     | intersect: -410131272254.42365
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | chi2: 2.0552173592821976
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | -- intersect: -410131272254.42365
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | current memory leak: 235.64 B/s (using 56 data points, chi2=2.06)
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | ..............................
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | . Timing measurements:
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | . get job = 0 s
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | . initial setup = 3 s
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | . payload setup = 7 s
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | . stage-in = 0 s
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | . payload execution = 3788 s
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | . stage-out = 0 s
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | . log creation = 0 s
[2025-02-25 21:26:47] 2025-02-26 05:26:27,615 | INFO     | ..............................
[2025-02-25 21:26:47] 2025-02-26 05:26:27,671 | INFO     | 
[2025-02-25 21:26:47] 2025-02-26 05:26:27,671 | INFO     | job summary report
[2025-02-25 21:26:47] 2025-02-26 05:26:27,671 | INFO     | --------------------------------------------------
[2025-02-25 21:26:47] 2025-02-26 05:26:27,671 | INFO     | PanDA job id: 6531064899
[2025-02-25 21:26:47] 2025-02-26 05:26:27,671 | INFO     | task id: 43401155
[2025-02-25 21:26:47] 2025-02-26 05:26:27,671 | INFO     | errors: (none)
[2025-02-25 21:26:47] 2025-02-26 05:26:27,671 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | pilot state: finished 
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | transexitcode: 0
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | exeerrorcode: 0
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | exeerrordiag: 
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | exitcode: 0
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | exitmsg: OK
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | cpuconsumptiontime: 26429 s
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | nevents: 400
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | neventsw: 0
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | pid: 3097748
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | pgrp: 3097748
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | corecount: 12
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | event service: False
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | sizes: {0: 2370378, 5: 2370584, 11: 2370640, 3799: 2396236, 3800: 2405171, 3802: 2405227, 3805: 2405525}
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | --------------------------------------------------
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | 
[2025-02-25 21:26:47] 2025-02-26 05:26:27,672 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-02-25 21:26:47] 2025-02-26 05:26:27,687 | WARNING  | process 3097748 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 21:26:47] 2025-02-26 05:26:27,687 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6531064899/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 21:26:47] 2025-02-26 05:26:27,687 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,688 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,688 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,688 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,689 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,689 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | job 6531064899 has completed (purged errors)
[2025-02-25 21:26:47] 2025-02-26 05:26:27,694 | INFO     | overall cleanup function is called
[2025-02-25 21:26:47] 2025-02-26 05:26:27,772 | INFO     | number of running child processes to parent process 3097748: 1
[2025-02-25 21:26:47] 2025-02-26 05:26:27,772 | INFO     | maximum number of monitored processes: 6
[2025-02-25 21:26:47] 2025-02-26 05:26:27,772 | INFO     | aborting job monitoring since job object (job id=6531064899) has expired
[2025-02-25 21:26:47] 2025-02-26 05:26:27,934 | INFO     | 3826s have passed since pilot start
[2025-02-25 21:26:47] 2025-02-26 05:26:28,702 | INFO     | --- collectZombieJob: --- 10, [3097748]
[2025-02-25 21:26:47] 2025-02-26 05:26:28,702 | INFO     | zombie collector waiting for pid 3097748
[2025-02-25 21:26:47] 2025-02-26 05:26:28,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 21:26:47] 2025-02-26 05:26:28,702 | INFO     | collected zombie processes
[2025-02-25 21:26:47] 2025-02-26 05:26:28,702 | INFO     | will attempt to kill all subprocesses of pid=3097748
[2025-02-25 21:26:47] 2025-02-26 05:26:28,780 | INFO     | process IDs to be killed: [3097748] (in reverse order)
[2025-02-25 21:26:47] 2025-02-26 05:26:28,835 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 21:26:47] 2025-02-26 05:26:28,835 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 21:26:47] 2025-02-26 05:26:28,841 | INFO     | did not find any defunct processes belonging to 3097748
[2025-02-25 21:26:47] 2025-02-26 05:26:28,846 | INFO     | did not find any defunct processes belonging to 3097748
[2025-02-25 21:26:47] 2025-02-26 05:26:28,846 | INFO     | ready for new job
[2025-02-25 21:26:47] 2025-02-26 05:26:28,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 21:26:47] 2025-02-26 05:26:28,847 | INFO     | **************************************
[2025-02-25 21:26:47] 2025-02-26 05:26:28,848 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 21:26:47] 2025-02-26 05:26:28,848 | INFO     | **************************************
[2025-02-25 21:26:47] 2025-02-26 05:26:28,848 | INFO     | 
[2025-02-25 21:26:47] 2025-02-26 05:26:28,850 | INFO     | architecture information:
[2025-02-25 21:26:47] 2025-02-26 05:26:28,850 | INFO     | executing command: cat /etc/os-release
[2025-02-25 21:26:47] 2025-02-26 05:26:28,858 | INFO     | cat /etc/os-release:
[2025-02-25 21:26:47] NAME="CentOS Linux"
[2025-02-25 21:26:47] VERSION="7 (Core)"
[2025-02-25 21:26:47] ID="centos"
[2025-02-25 21:26:47] ID_LIKE="rhel fedora"
[2025-02-25 21:26:47] VERSION_ID="7"
[2025-02-25 21:26:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 21:26:47] ANSI_COLOR="0;31"
[2025-02-25 21:26:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 21:26:47] HOME_URL="https://www.centos.org/"
[2025-02-25 21:26:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 21:26:47] 
[2025-02-25 21:26:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 21:26:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 21:26:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 21:26:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 21:26:47] 
[2025-02-25 21:26:47] 2025-02-26 05:26:28,858 | INFO     | **************************************
[2025-02-25 21:26:47] 2025-02-26 05:26:29,361 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-02-25 21:26:47] 2025-02-26 05:26:29,373 | INFO     | sufficient remaining disk space (2096843718656 B)
[2025-02-25 21:26:47] 2025-02-26 05:26:29,373 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 21:26:47] 2025-02-26 05:26:29,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 21:26:47] 2025-02-26 05:26:29,374 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 21:26:47] 2025-02-26 05:26:29,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 21:26:47] 2025-02-26 05:26:29,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 21:26:47] 2025-02-26 05:26:29,374 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 21:26:47] 2025-02-26 05:26:29,374 | INFO     | aborting loop
[2025-02-25 21:26:47] 2025-02-26 05:26:29,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 21:26:47] 2025-02-26 05:26:29,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 21:26:47] 2025-02-26 05:26:29,590 | INFO     | all job control threads have been joined
[2025-02-25 21:26:47] 2025-02-26 05:26:29,776 | INFO     | all data control threads have been joined
[2025-02-25 21:26:47] 2025-02-26 05:26:29,895 | INFO     | all payload control threads have been joined
[2025-02-25 21:26:47] 2025-02-26 05:26:30,378 | INFO     | [job] retrieve thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:30,380 | INFO     | [job] queue monitor thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:30,382 | INFO     | [job] job monitor thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:30,595 | INFO     | [job] control thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:30,742 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:30,780 | INFO     | [data] control thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:30,819 | INFO     | [job] validate thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:30,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 21:26:47] 2025-02-26 05:26:30,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 21:26:47] 2025-02-26 05:26:30,876 | INFO     | [payload] failed_post thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:30,900 | INFO     | [payload] control thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:31,270 | INFO     | [data] copytool_in thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:31,271 | INFO     | [payload] validate_post thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:31,767 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:31,799 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:32,881 | INFO     | [data] copytool_out thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:34,882 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:40,027 | INFO     | job.realtimelogging is not enabled
[2025-02-25 21:26:47] 2025-02-26 05:26:41,032 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 21:26:47] 2025-02-26 05:26:42,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139942957803328)>', '<ExcThread(monitor, started 139942424463104)>']
[2025-02-25 21:26:47] 2025-02-26 05:26:42,430 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 21:26:47] 2025-02-26 05:26:42,430 | INFO     | [monitor] control thread has ended
[2025-02-25 21:26:47] 2025-02-26 05:26:47,280 | INFO     | all workflow threads have been joined
[2025-02-25 21:26:47] 2025-02-26 05:26:47,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 21:26:47] 2025-02-26 05:26:47,281 | INFO     | traces error code: 0
[2025-02-25 21:26:47] 2025-02-26 05:26:47,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 21:26:47] 2025-02-26 05:26:47,392 [wrapper] ==== pilot stdout END ====
[2025-02-25 21:26:47] 2025-02-26 05:26:47,394 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 21:26:47] 2025-02-26 05:26:47,395 [wrapper] pilotpid: 3090948
[2025-02-25 21:26:47] 2025-02-26 05:26:47,397 [wrapper] Pilot exit status: 0
[2025-02-25 21:26:47] 2025-02-26 05:26:47,403 [wrapper] pandaids: 6531064899
[2025-02-25 21:26:47] 2025-02-26 05:26:47,441 [wrapper] cleanup supervisor_pilot 3443792 3090949
[2025-02-25 21:26:47] 2025-02-26 05:26:47,443 [wrapper] Test setup, not cleaning
[2025-02-25 21:26:47] 2025-02-26 05:26:47,446 [wrapper] apfmon messages muted
[2025-02-25 21:26:47] 2025-02-26 05:26:47,447 [wrapper] ==== wrapper stdout END ====
[2025-02-25 21:26:47] 2025-02-26 05:26:47,449 [wrapper] ==== wrapper stderr END ====
[2025-02-25 21:26:47]  *** Error codes and diagnostics ***
[2025-02-25 21:26:47]     "exeErrorCode": 0,
[2025-02-25 21:26:47]     "exeErrorDiag": "",
[2025-02-25 21:26:47]     "pilotErrorCode": 0,
[2025-02-25 21:26:47]     "pilotErrorDiag": "",
[2025-02-25 21:26:47]  *** Listing of results directory ***
[2025-02-25 21:26:47] total 433592
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc    491065 Feb 25 14:04 pilot3.tar.gz
[2025-02-25 21:26:47] -rwx------. 1 boinc boinc     35865 Feb 25 14:25 runpilot2-wrapper.sh
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc      5118 Feb 25 14:26 queuedata.json
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc       100 Feb 25 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 21:26:47] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 20:22 run_atlas
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc       105 Feb 25 20:22 job.xml
[2025-02-25 21:26:47] -rw-r--r--. 2 boinc boinc 253685737 Feb 25 20:22 EVNT.43401153._000075.pool.root.1
[2025-02-25 21:26:47] -rw-r--r--. 2 boinc boinc    503552 Feb 25 20:22 input.tar.gz
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc      6602 Feb 25 20:22 init_data.xml
[2025-02-25 21:26:47] -rw-r--r--. 2 boinc boinc     17569 Feb 25 20:22 start_atlas.sh
[2025-02-25 21:26:47] drwxrwx--x. 2 boinc boinc      4096 Feb 25 20:22 shared
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc         0 Feb 25 20:22 boinc_lockfile
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc      2539 Feb 25 20:22 pandaJob.out
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc       424 Feb 25 20:22 setup.sh.local
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc    987490 Feb 25 20:22 agis_schedconf.cvmfs.json
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc   1573632 Feb 25 20:22 agis_ddmendpoints.agis.ALL.json
[2025-02-25 21:26:47] drwx------. 4 boinc boinc      4096 Feb 25 20:22 pilot3
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc        95 Feb 25 21:25 pilot_heartbeat.json
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc 184999812 Feb 25 21:25 HITS.43401155._001874.pool.root.1
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc       529 Feb 25 21:26 boinc_task_state.xml
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc      1038 Feb 25 21:26 memory_monitor_summary.json
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc    369652 Feb 25 21:26 log.43401155._001874.job.log.tgz.1
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc      7739 Feb 25 21:26 heartbeat.json
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc      8192 Feb 25 21:26 boinc_mmap_file
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc        27 Feb 25 21:26 wrapper_checkpoint.txt
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc      4409 Feb 25 21:26 pilotlog.txt
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc    388996 Feb 25 21:26 log.43401155._001874.job.log.1
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc       357 Feb 25 21:26 output.list
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc       620 Feb 25 21:26 runtime_log
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc    778240 Feb 25 21:26 result.tar.gz
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc     11144 Feb 25 21:26 runtime_log.err
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc       658 Feb 25 21:26 bdzMDmbXI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmtLxKDmzvz0Zm.diag
[2025-02-25 21:26:47] -rw-r--r--. 1 boinc boinc     21861 Feb 25 21:26 stderr.txt
[2025-02-25 21:26:47] HITS file was successfully produced:
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc 184999812 Feb 25 21:25 shared/HITS.pool.root.1
[2025-02-25 21:26:47]  *** Contents of shared directory: ***
[2025-02-25 21:26:47] total 429684
[2025-02-25 21:26:47] -rw-r--r--. 2 boinc boinc 253685737 Feb 25 20:22 ATLAS.root_0
[2025-02-25 21:26:47] -rw-r--r--. 2 boinc boinc    503552 Feb 25 20:22 input.tar.gz
[2025-02-25 21:26:47] -rw-r--r--. 2 boinc boinc     17569 Feb 25 20:22 start_atlas.sh
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc 184999812 Feb 25 21:25 HITS.pool.root.1
[2025-02-25 21:26:47] -rw-------. 1 boinc boinc    778240 Feb 25 21:26 result.tar.gz
21:26:49 (3087228): run_atlas exited; CPU time 26394.931152
21:26:49 (3087228): called boinc_finish(0)

</stderr_txt>
]]>

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