Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:58:46 (2673735): wrapper (7.7.26015): starting
03:58:46 (2673735): wrapper: running run_atlas (--nthreads 8)
[2025-02-26 03:58:46] Arguments: --nthreads 8
[2025-02-26 03:58:46] Threads: 8
[2025-02-26 03:58:46] Checking for CVMFS
[2025-02-26 03:58:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 03:58:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 03:58:46] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 03:58:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 03:58:46] 2.11.5.0 3541397 8033 347796 143068 2 104 8953133 37641217 15846 130560 0 368817 96.026 3138880 33610 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-26 03:58:46] CVMFS is ok
[2025-02-26 03:58:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 03:58:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 03:58:46] Further information can be found at the LHC@home message board.
[2025-02-26 03:58:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 03:58:46] Checking for apptainer binary...
[2025-02-26 03:58:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-26 03:58:46] Running /usr/bin/apptainer --version
[2025-02-26 03:58:46] apptainer version 1.3.6-1.el9
[2025-02-26 03:58:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 03:58:46] c6-8-25-1.aglt2.org
[2025-02-26 03:58:46] apptainer works
[2025-02-26 03:58:46] Set ATHENA_PROC_NUMBER=8
[2025-02-26 03:58:46] Set ATHENA_CORE_NUMBER=8
[2025-02-26 03:58:46] Starting ATLAS job with PandaID=6531062598
[2025-02-26 03:58:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 05:34:21]  *** The last 200 lines of the pilot log: ***
[2025-02-26 05:34:21]  lfn=log.43401155._001507.job.log.tgz.1
[2025-02-26 05:34:21]  mtime=0
[2025-02-26 05:34:21]  protocol_id=None
[2025-02-26 05:34:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 05:34:21]  replicas=None
[2025-02-26 05:34:21]  scope=mc23_13p6TeV
[2025-02-26 05:34:21]  status=None
[2025-02-26 05:34:21]  status_code=0
[2025-02-26 05:34:21]  storage_token=
[2025-02-26 05:34:21]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6531062598/log.43401155._001507.job.log.tgz.1
[2025-02-26 05:34:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/66/log.43401155._001507.job.log.tgz.1
[2025-02-26 05:34:21]  workdir=None
[2025-02-26 05:34:21] ]
[2025-02-26 05:34:21] 2025-02-26 10:33:58,131 | INFO     | transferring file log.43401155._001507.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6531062598/log.43401155._001507.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-26 05:34:21] 2025-02-26 10:33:58,132 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6531062598/log.43401155._001507.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401155._001507.job
[2025-02-26 05:34:21] 2025-02-26 10:33:58,150 | INFO     | adding to output.list: log.43401155._001507.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/66/log.43401155._001507.job.log.tg
[2025-02-26 05:34:21] 2025-02-26 10:33:58,150 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 05:34:21] 2025-02-26 10:33:58,151 | INFO     | summary of transferred files:
[2025-02-26 05:34:21] 2025-02-26 10:33:58,151 | INFO     |  -- lfn=log.43401155._001507.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 05:34:21] 2025-02-26 10:33:58,151 | INFO     | stage-out finished correctly
[2025-02-26 05:34:21] 2025-02-26 10:33:59,629 | INFO     | monitor loop #427: job 0:6531062598 is in state 'finished'
[2025-02-26 05:34:21] 2025-02-26 10:33:59,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 05:34:21] 2025-02-26 10:34:00,721 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 05:34:21] 2025-02-26 10:34:02,133 | INFO     | monitor loop #428: job 0:6531062598 is in state 'finished'
[2025-02-26 05:34:21] 2025-02-26 10:34:02,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 05:34:21] 2025-02-26 10:34:03,580 | INFO     | job 6531062598 has state=finished
[2025-02-26 05:34:21] 2025-02-26 10:34:03,581 | INFO     | preparing for final server update for job 6531062598 in state='finished'
[2025-02-26 05:34:21] 2025-02-26 10:34:03,581 | INFO     | this job has now completed (state=finished)
[2025-02-26 05:34:21] 2025-02-26 10:34:03,582 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 05:34:21] 2025-02-26 10:34:03,582 | INFO     | log transfer has been attempted: DONE
[2025-02-26 05:34:21] 2025-02-26 10:34:03,582 | INFO     | job 6531062598 has finished - writing final server update
[2025-02-26 05:34:21] 2025-02-26 10:34:03,582 | INFO     | total number of processed events: 400 (read)
[2025-02-26 05:34:21] 2025-02-26 10:34:03,601 | INFO     | executing command: lscpu
[2025-02-26 05:34:21] 2025-02-26 10:34:03,657 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-26 05:34:21] 2025-02-26 10:34:03,695 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 05:34:21] 2025-02-26 10:34:04,637 | INFO     | monitor loop #429: job 0:6531062598 is in state 'finished'
[2025-02-26 05:34:21] 2025-02-26 10:34:04,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 05:34:21] 2025-02-26 10:34:07,141 | INFO     | monitor loop #430: job 0:6531062598 is in state 'finished'
[2025-02-26 05:34:21] 2025-02-26 10:34:07,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 05:34:21] 2025-02-26 10:34:07,365 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-26 05:34:21] 2025-02-26 10:34:07,365 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531062598/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 05:34:21] 2025-02-26 10:34:07,366 | INFO     | extracted standard info from prmon json
[2025-02-26 05:34:21] 2025-02-26 10:34:07,366 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 05:34:21] 2025-02-26 10:34:07,366 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 05:34:21] 2025-02-26 10:34:07,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 05:34:21] 2025-02-26 10:34:07,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 05:34:21] 2025-02-26 10:34:07,369 | INFO     | fitting pss+swap vs Time
[2025-02-26 05:34:21] 2025-02-26 10:34:07,369 | INFO     | model: linear, x: [1740560667.0, 1740560728.0, 1740560789.0, 1740560850.0, 1740560911.0, 1740560972.0, 1740561033.0, 1740561094.0, 1740561155.0, 1740561216.0, 1740
[2025-02-26 05:34:21] 2025-02-26 10:34:07,369 | INFO     | sum of square deviations: 197206809.48837242
[2025-02-26 05:34:21] 2025-02-26 10:34:07,370 | INFO     | sum of deviations: 18782763955.46511
[2025-02-26 05:34:21] 2025-02-26 10:34:07,370 | INFO     | mean x: 1740563259.511628
[2025-02-26 05:34:21] 2025-02-26 10:34:07,370 | INFO     | mean y: 2205598.034883721
[2025-02-26 05:34:21] 2025-02-26 10:34:07,370 | INFO     | -- intersect: -165775989068.66333
[2025-02-26 05:34:21] 2025-02-26 10:34:07,370 | INFO     | intersect: -165775989068.66333
[2025-02-26 05:34:21] 2025-02-26 10:34:07,370 | INFO     | chi2: 1.3913049854302448
[2025-02-26 05:34:21] 2025-02-26 10:34:07,371 | INFO     | -- intersect: -165775989068.66333
[2025-02-26 05:34:21] 2025-02-26 10:34:07,371 | INFO     | current memory leak: 95.24 B/s (using 86 data points, chi2=1.39)
[2025-02-26 05:34:21] 2025-02-26 10:34:07,371 | INFO     | ..............................
[2025-02-26 05:34:21] 2025-02-26 10:34:07,371 | INFO     | . Timing measurements:
[2025-02-26 05:34:21] 2025-02-26 10:34:07,371 | INFO     | . get job = 0 s
[2025-02-26 05:34:21] 2025-02-26 10:34:07,371 | INFO     | . initial setup = 2 s
[2025-02-26 05:34:21] 2025-02-26 10:34:07,372 | INFO     | . payload setup = 5 s
[2025-02-26 05:34:21] 2025-02-26 10:34:07,372 | INFO     | . stage-in = 0 s
[2025-02-26 05:34:21] 2025-02-26 10:34:07,372 | INFO     | . payload execution = 5674 s
[2025-02-26 05:34:21] 2025-02-26 10:34:07,372 | INFO     | . stage-out = 0 s
[2025-02-26 05:34:21] 2025-02-26 10:34:07,372 | INFO     | . log creation = 0 s
[2025-02-26 05:34:21] 2025-02-26 10:34:07,372 | INFO     | ..............................
[2025-02-26 05:34:21] 2025-02-26 10:34:07,467 | INFO     | 
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | job summary report
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | --------------------------------------------------
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | PanDA job id: 6531062598
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | task id: 43401155
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | errors: (none)
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | pilot state: finished 
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | transexitcode: 0
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | exeerrorcode: 0
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | exeerrordiag: 
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | exitcode: 0
[2025-02-26 05:34:21] 2025-02-26 10:34:07,468 | INFO     | exitmsg: OK
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | cpuconsumptiontime: 37355 s
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | nevents: 400
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | neventsw: 0
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | pid: 2686633
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | pgrp: 2686633
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | corecount: 8
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | event service: False
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | sizes: {0: 2363813, 4: 2364019, 11: 2364047, 5684: 2390623, 5686: 2399564, 5688: 2399620, 5695: 2399918}
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | --------------------------------------------------
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | 
[2025-02-26 05:34:21] 2025-02-26 10:34:07,469 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-26 05:34:21] 2025-02-26 10:34:07,489 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,489 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,489 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,489 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 05:34:21] 2025-02-26 10:34:07,490 | INFO     | job 6531062598 has completed (purged errors)
[2025-02-26 05:34:21] 2025-02-26 10:34:07,491 | INFO     | overall cleanup function is called
[2025-02-26 05:34:21] 2025-02-26 10:34:08,498 | INFO     | --- collectZombieJob: --- 10, [2686633]
[2025-02-26 05:34:21] 2025-02-26 10:34:08,499 | INFO     | zombie collector waiting for pid 2686633
[2025-02-26 05:34:21] 2025-02-26 10:34:08,499 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 05:34:21] 2025-02-26 10:34:08,499 | INFO     | collected zombie processes
[2025-02-26 05:34:21] 2025-02-26 10:34:08,499 | INFO     | will attempt to kill all subprocesses of pid=2686633
[2025-02-26 05:34:21] 2025-02-26 10:34:08,610 | INFO     | process IDs to be killed: [2686633] (in reverse order)
[2025-02-26 05:34:21] 2025-02-26 10:34:08,719 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 05:34:21] 2025-02-26 10:34:08,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 05:34:21] 2025-02-26 10:34:08,735 | INFO     | did not find any defunct processes belonging to 2686633
[2025-02-26 05:34:21] 2025-02-26 10:34:08,750 | INFO     | did not find any defunct processes belonging to 2686633
[2025-02-26 05:34:21] 2025-02-26 10:34:08,750 | INFO     | ready for new job
[2025-02-26 05:34:21] 2025-02-26 10:34:08,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 05:34:21] 2025-02-26 10:34:08,752 | INFO     | **************************************
[2025-02-26 05:34:21] 2025-02-26 10:34:08,752 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 05:34:21] 2025-02-26 10:34:08,752 | INFO     | **************************************
[2025-02-26 05:34:21] 2025-02-26 10:34:08,752 | INFO     | 
[2025-02-26 05:34:21] 2025-02-26 10:34:08,770 | INFO     | architecture information:
[2025-02-26 05:34:21] 2025-02-26 10:34:08,770 | INFO     | executing command: cat /etc/os-release
[2025-02-26 05:34:21] 2025-02-26 10:34:08,785 | INFO     | cat /etc/os-release:
[2025-02-26 05:34:21] NAME="CentOS Linux"
[2025-02-26 05:34:21] VERSION="7 (Core)"
[2025-02-26 05:34:21] ID="centos"
[2025-02-26 05:34:21] ID_LIKE="rhel fedora"
[2025-02-26 05:34:21] VERSION_ID="7"
[2025-02-26 05:34:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 05:34:21] ANSI_COLOR="0;31"
[2025-02-26 05:34:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 05:34:21] HOME_URL="https://www.centos.org/"
[2025-02-26 05:34:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 05:34:21] 
[2025-02-26 05:34:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 05:34:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 05:34:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 05:34:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 05:34:21] 
[2025-02-26 05:34:21] 2025-02-26 10:34:08,785 | INFO     | **************************************
[2025-02-26 05:34:21] 2025-02-26 10:34:09,288 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-26 05:34:21] 2025-02-26 10:34:09,303 | INFO     | sufficient remaining disk space (67880615936 B)
[2025-02-26 05:34:21] 2025-02-26 10:34:09,304 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 05:34:21] 2025-02-26 10:34:09,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 05:34:21] 2025-02-26 10:34:09,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 05:34:21] 2025-02-26 10:34:09,304 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 05:34:21] 2025-02-26 10:34:09,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 05:34:21] 2025-02-26 10:34:09,305 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 05:34:21] 2025-02-26 10:34:09,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 05:34:21] 2025-02-26 10:34:09,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 05:34:21] 2025-02-26 10:34:09,328 | INFO     | all data control threads have been joined
[2025-02-26 05:34:21] 2025-02-26 10:34:09,644 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-26 05:34:21] 2025-02-26 10:34:09,644 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-26 05:34:21] 2025-02-26 10:34:09,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 05:34:21] 2025-02-26 10:34:09,645 | INFO     | will abort loop
[2025-02-26 05:34:21] 2025-02-26 10:34:10,306 | INFO     | [job] retrieve thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:10,311 | INFO     | [job] queue monitor thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:10,329 | INFO     | [payload] failed_post thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:10,334 | INFO     | [data] control thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:10,531 | INFO     | all payload control threads have been joined
[2025-02-26 05:34:21] 2025-02-26 10:34:10,552 | INFO     | all job control threads have been joined
[2025-02-26 05:34:21] 2025-02-26 10:34:10,565 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:10,649 | INFO     | [job] job monitor thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,309 | INFO     | [data] copytool_out thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 05:34:21] 2025-02-26 10:34:11,317 | INFO     | [job] validate thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,431 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,457 | INFO     | [data] copytool_in thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,536 | INFO     | [payload] control thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,557 | INFO     | [job] control thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,612 | INFO     | [payload] validate_post thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,700 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:11,789 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:15,320 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 05:34:21] 2025-02-26 10:34:16,120 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139960853370688)>', '<ExcThread(monitor, started 139960090879744)>']
[2025-02-26 05:34:21] 2025-02-26 10:34:16,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 05:34:21] 2025-02-26 10:34:16,340 | INFO     | [monitor] control thread has ended
[2025-02-26 05:34:21] 2025-02-26 10:34:21,145 | INFO     | all workflow threads have been joined
[2025-02-26 05:34:21] 2025-02-26 10:34:21,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 05:34:21] 2025-02-26 10:34:21,146 | INFO     | traces error code: 0
[2025-02-26 05:34:21] 2025-02-26 10:34:21,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 05:34:21] 2025-02-26 10:34:21,346 [wrapper] ==== pilot stdout END ====
[2025-02-26 05:34:21] 2025-02-26 10:34:21,348 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 05:34:21] 2025-02-26 10:34:21,350 [wrapper] pilotpid: 2678853
[2025-02-26 05:34:21] 2025-02-26 10:34:21,352 [wrapper] Pilot exit status: 0
[2025-02-26 05:34:21] 2025-02-26 10:34:21,360 [wrapper] pandaids: 6531062598
[2025-02-26 05:34:21] 2025-02-26 10:34:21,411 [wrapper] cleanup supervisor_pilot 3287446 2678854
[2025-02-26 05:34:21] 2025-02-26 10:34:21,414 [wrapper] Test setup, not cleaning
[2025-02-26 05:34:21] 2025-02-26 10:34:21,418 [wrapper] apfmon messages muted
[2025-02-26 05:34:21] 2025-02-26 10:34:21,420 [wrapper] ==== wrapper stdout END ====
[2025-02-26 05:34:21] 2025-02-26 10:34:21,422 [wrapper] ==== wrapper stderr END ====
[2025-02-26 05:34:21]  *** Error codes and diagnostics ***
[2025-02-26 05:34:21]     "exeErrorCode": 0,
[2025-02-26 05:34:21]     "exeErrorDiag": "",
[2025-02-26 05:34:21]     "pilotErrorCode": 0,
[2025-02-26 05:34:21]     "pilotErrorDiag": "",
[2025-02-26 05:34:21]  *** Listing of results directory ***
[2025-02-26 05:34:21] total 427660
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 17:04 pilot3.tar.gz
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 17:24 queuedata.json
[2025-02-26 05:34:21] -rwx------. 1 boincer umatlas     35865 Feb 25 17:25 runpilot2-wrapper.sh
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas       100 Feb 26 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 05:34:21] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 26 03:58 run_atlas
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas       105 Feb 26 03:58 job.xml
[2025-02-26 05:34:21] -rw-r--r--. 2 boincer umatlas 249232594 Feb 26 03:58 EVNT.43401153._000061.pool.root.1
[2025-02-26 05:34:21] -rw-r--r--. 2 boincer umatlas     17569 Feb 26 03:58 start_atlas.sh
[2025-02-26 05:34:21] drwxrwx--x. 2 boincer umatlas      4096 Feb 26 03:58 shared
[2025-02-26 05:34:21] -rw-r--r--. 2 boincer umatlas    503548 Feb 26 03:58 input.tar.gz
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas         0 Feb 26 03:58 boinc_lockfile
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas      2539 Feb 26 03:58 pandaJob.out
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas       467 Feb 26 03:58 setup.sh.local
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas    986636 Feb 26 03:58 agis_schedconf.cvmfs.json
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas   1569202 Feb 26 03:58 agis_ddmendpoints.agis.ALL.json
[2025-02-26 05:34:21] drwx------. 4 boincer umatlas      4096 Feb 26 03:58 pilot3
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas      6855 Feb 26 05:31 init_data.xml
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas 183163033 Feb 26 05:33 HITS.43401155._001507.pool.root.1
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas       529 Feb 26 05:33 boinc_task_state.xml
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas      1044 Feb 26 05:33 memory_monitor_summary.json
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas    311099 Feb 26 05:33 log.43401155._001507.job.log.tgz.1
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas      8192 Feb 26 05:33 boinc_mmap_file
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas        27 Feb 26 05:33 wrapper_checkpoint.txt
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas        95 Feb 26 05:34 pilot_heartbeat.json
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas      7733 Feb 26 05:34 heartbeat.json
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas      4524 Feb 26 05:34 pilotlog.txt
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas    560728 Feb 26 05:34 log.43401155._001507.job.log.1
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas       357 Feb 26 05:34 output.list
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas       620 Feb 26 05:34 runtime_log
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas    890880 Feb 26 05:34 result.tar.gz
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas     11423 Feb 26 05:34 runtime_log.err
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas       653 Feb 26 05:34 NpYMDmTXI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmdJxKDmFGGddm.diag
[2025-02-26 05:34:21] -rw-r--r--. 1 boincer umatlas     21762 Feb 26 05:34 stderr.txt
[2025-02-26 05:34:21] HITS file was successfully produced:
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas 183163033 Feb 26 05:33 shared/HITS.pool.root.1
[2025-02-26 05:34:21]  *** Contents of shared directory: ***
[2025-02-26 05:34:21] total 423652
[2025-02-26 05:34:21] -rw-r--r--. 2 boincer umatlas 249232594 Feb 26 03:58 ATLAS.root_0
[2025-02-26 05:34:21] -rw-r--r--. 2 boincer umatlas     17569 Feb 26 03:58 start_atlas.sh
[2025-02-26 05:34:21] -rw-r--r--. 2 boincer umatlas    503548 Feb 26 03:58 input.tar.gz
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas 183163033 Feb 26 05:33 HITS.pool.root.1
[2025-02-26 05:34:21] -rw-------. 1 boincer umatlas    890880 Feb 26 05:34 result.tar.gz
05:34:23 (2673735): run_atlas exited; CPU time 37359.668778
05:34:23 (2673735): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN