Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:56:50 (1418564): wrapper (7.7.26015): starting
18:56:50 (1418564): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 18:56:50] Arguments: --nthreads 9
[2025-02-25 18:56:50] Threads: 9
[2025-02-25 18:56:50] Checking for CVMFS
[2025-02-25 18:56:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 18:56:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 18:56:50] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 18:56:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 18:56:50] 2.11.5.0 2844332 137173 303824 143056 1 310 22620455 37641216 20217 130560 0 2517976 98.719 7629170 26288 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 18:56:50] CVMFS is ok
[2025-02-25 18:56:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 18:56:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 18:56:50] Further information can be found at the LHC@home message board.
[2025-02-25 18:56:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 18:56:50] Checking for apptainer binary...
[2025-02-25 18:56:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 18:56:50] Running /usr/bin/apptainer --version
[2025-02-25 18:56:50] apptainer version 1.3.6-1.el9
[2025-02-25 18:56:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 18:56:50] c6-6-39-4.aglt2.org
[2025-02-25 18:56:50] apptainer works
[2025-02-25 18:56:50] Set ATHENA_PROC_NUMBER=9
[2025-02-25 18:56:50] Set ATHENA_CORE_NUMBER=9
[2025-02-25 18:56:50] Starting ATLAS job with PandaID=6531021681
[2025-02-25 18:56:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 20:13:05]  *** The last 200 lines of the pilot log: ***
[2025-02-25 20:13:05]  protocol_id=None
[2025-02-25 20:13:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 20:13:05]  replicas=None
[2025-02-25 20:13:05]  scope=mc23_13p6TeV
[2025-02-25 20:13:05]  status=None
[2025-02-25 20:13:05]  status_code=0
[2025-02-25 20:13:05]  storage_token=
[2025-02-25 20:13:05]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6531021681/log.43401155._000009.job.log.tgz.1
[2025-02-25 20:13:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/7b/log.43401155._000009.job.log.tgz.1
[2025-02-25 20:13:05]  workdir=None
[2025-02-25 20:13:05] ]
[2025-02-25 20:13:05] 2025-02-26 01:12:38,312 | INFO     | transferring file log.43401155._000009.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6531021681/log.43401155._000009.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 20:13:05] 2025-02-26 01:12:38,312 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6531021681/log.43401155._000009.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401155._000009.job
[2025-02-25 20:13:05] 2025-02-26 01:12:38,325 | INFO     | adding to output.list: log.43401155._000009.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2e/7b/log.43401155._000009.job.log.tg
[2025-02-25 20:13:05] 2025-02-26 01:12:38,326 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 20:13:05] 2025-02-26 01:12:38,326 | INFO     | summary of transferred files:
[2025-02-25 20:13:05] 2025-02-26 01:12:38,326 | INFO     |  -- lfn=log.43401155._000009.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 20:13:05] 2025-02-26 01:12:38,327 | INFO     | stage-out finished correctly
[2025-02-25 20:13:05] 2025-02-26 01:12:38,408 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 20:13:05] 2025-02-26 01:12:40,272 | WARNING  | process 1430342 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 20:13:05] 2025-02-26 01:12:40,273 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6531021681/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 20:13:05] 2025-02-26 01:12:40,450 | INFO     | number of running child processes to parent process 1430342: 1
[2025-02-25 20:13:05] 2025-02-26 01:12:40,451 | INFO     | maximum number of monitored processes: 6
[2025-02-25 20:13:05] 2025-02-26 01:12:41,129 | INFO     | job 6531021681 has state=finished
[2025-02-25 20:13:05] 2025-02-26 01:12:41,130 | INFO     | preparing for final server update for job 6531021681 in state='finished'
[2025-02-25 20:13:05] 2025-02-26 01:12:41,131 | INFO     | this job has now completed (state=finished)
[2025-02-25 20:13:05] 2025-02-26 01:12:41,131 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 20:13:05] 2025-02-26 01:12:41,131 | INFO     | log transfer has been attempted: DONE
[2025-02-25 20:13:05] 2025-02-26 01:12:41,131 | INFO     | job 6531021681 has finished - writing final server update
[2025-02-25 20:13:05] 2025-02-26 01:12:41,131 | INFO     | total number of processed events: 400 (read)
[2025-02-25 20:13:05] 2025-02-26 01:12:41,148 | INFO     | executing command: lscpu
[2025-02-25 20:13:05] 2025-02-26 01:12:41,203 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 20:13:05] 2025-02-26 01:12:41,235 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 20:13:05] 2025-02-26 01:12:42,953 | INFO     | monitor loop #337: job 0:6531021681 is in state 'finished'
[2025-02-25 20:13:05] 2025-02-26 01:12:42,954 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 20:13:05] 2025-02-26 01:12:45,400 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 20:13:05] 2025-02-26 01:12:45,401 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6531021681/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 20:13:05] 2025-02-26 01:12:45,402 | INFO     | extracted standard info from prmon json
[2025-02-25 20:13:05] 2025-02-26 01:12:45,402 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 20:13:05] 2025-02-26 01:12:45,402 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 20:13:05] 2025-02-26 01:12:45,403 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 20:13:05] 2025-02-26 01:12:45,403 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 20:13:05] 2025-02-26 01:12:45,406 | INFO     | fitting pss+swap vs Time
[2025-02-25 20:13:05] 2025-02-26 01:12:45,407 | INFO     | model: linear, x: [1740528151.0, 1740528212.0, 1740528273.0, 1740528334.0, 1740528395.0, 1740528456.0, 1740528517.0, 1740528578.0, 1740528639.0, 1740528700.0, 1740
[2025-02-25 20:13:05] 2025-02-26 01:12:45,407 | INFO     | sum of square deviations: 93240818.0
[2025-02-25 20:13:05] 2025-02-26 01:12:45,407 | INFO     | sum of deviations: 14883479853.0
[2025-02-25 20:13:05] 2025-02-26 01:12:45,407 | INFO     | mean x: 1740530164.0
[2025-02-25 20:13:05] 2025-02-26 01:12:45,407 | INFO     | mean y: 2234134.970149254
[2025-02-25 20:13:05] 2025-02-26 01:12:45,407 | INFO     | -- intersect: -277828293150.11633
[2025-02-25 20:13:05] 2025-02-26 01:12:45,407 | INFO     | intersect: -277828293150.11633
[2025-02-25 20:13:05] 2025-02-26 01:12:45,408 | INFO     | chi2: 1.2477549691808503
[2025-02-25 20:13:05] 2025-02-26 01:12:45,408 | INFO     | -- intersect: -277828293150.11633
[2025-02-25 20:13:05] 2025-02-26 01:12:45,408 | INFO     | current memory leak: 159.62 B/s (using 67 data points, chi2=1.25)
[2025-02-25 20:13:05] 2025-02-26 01:12:45,408 | INFO     | ..............................
[2025-02-25 20:13:05] 2025-02-26 01:12:45,408 | INFO     | . Timing measurements:
[2025-02-25 20:13:05] 2025-02-26 01:12:45,408 | INFO     | . get job = 0 s
[2025-02-25 20:13:05] 2025-02-26 01:12:45,408 | INFO     | . initial setup = 2 s
[2025-02-25 20:13:05] 2025-02-26 01:12:45,408 | INFO     | . payload setup = 5 s
[2025-02-25 20:13:05] 2025-02-26 01:12:45,409 | INFO     | . stage-in = 0 s
[2025-02-25 20:13:05] 2025-02-26 01:12:45,409 | INFO     | . payload execution = 4512 s
[2025-02-25 20:13:05] 2025-02-26 01:12:45,409 | INFO     | . stage-out = 0 s
[2025-02-25 20:13:05] 2025-02-26 01:12:45,409 | INFO     | . log creation = 0 s
[2025-02-25 20:13:05] 2025-02-26 01:12:45,409 | INFO     | ..............................
[2025-02-25 20:13:05] 2025-02-26 01:12:45,503 | INFO     | 4547s have passed since pilot start
[2025-02-25 20:13:05] 2025-02-26 01:12:45,909 | INFO     | 
[2025-02-25 20:13:05] 2025-02-26 01:12:45,909 | INFO     | job summary report
[2025-02-25 20:13:05] 2025-02-26 01:12:45,909 | INFO     | --------------------------------------------------
[2025-02-25 20:13:05] 2025-02-26 01:12:45,909 | INFO     | PanDA job id: 6531021681
[2025-02-25 20:13:05] 2025-02-26 01:12:45,909 | INFO     | task id: 43401155
[2025-02-25 20:13:05] 2025-02-26 01:12:45,909 | INFO     | errors: (none)
[2025-02-25 20:13:05] 2025-02-26 01:12:45,909 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | pilot state: finished 
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | transexitcode: 0
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | exeerrorcode: 0
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | exeerrordiag: 
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | exitcode: 0
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | exitmsg: OK
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | cpuconsumptiontime: 32250 s
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | nevents: 400
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | neventsw: 0
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | pid: 1430342
[2025-02-25 20:13:05] 2025-02-26 01:12:45,910 | INFO     | pgrp: 1430342
[2025-02-25 20:13:05] 2025-02-26 01:12:45,911 | INFO     | corecount: 9
[2025-02-25 20:13:05] 2025-02-26 01:12:45,911 | INFO     | event service: False
[2025-02-25 20:13:05] 2025-02-26 01:12:45,911 | INFO     | sizes: {0: 2370365, 5: 2370571, 11: 2370627, 4521: 2396730, 4522: 2405726, 4523: 2405726, 4530: 2406024}
[2025-02-25 20:13:05] 2025-02-26 01:12:45,911 | INFO     | --------------------------------------------------
[2025-02-25 20:13:05] 2025-02-26 01:12:45,911 | INFO     | 
[2025-02-25 20:13:05] 2025-02-26 01:12:45,911 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 20:13:05] 2025-02-26 01:12:45,930 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,930 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,930 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 20:13:05] 2025-02-26 01:12:45,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 20:13:05] 2025-02-26 01:12:45,932 | INFO     | job 6531021681 has completed (purged errors)
[2025-02-25 20:13:05] 2025-02-26 01:12:45,932 | INFO     | overall cleanup function is called
[2025-02-25 20:13:05] 2025-02-26 01:12:46,931 | INFO     | PID=1422842 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 20:13:05] 2025-02-26 01:12:46,931 | INFO     | .. there are 30 such processes running
[2025-02-25 20:13:05] 2025-02-26 01:12:46,939 | INFO     | --- collectZombieJob: --- 10, [1430342]
[2025-02-25 20:13:05] 2025-02-26 01:12:46,940 | INFO     | zombie collector waiting for pid 1430342
[2025-02-25 20:13:05] 2025-02-26 01:12:46,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 20:13:05] 2025-02-26 01:12:46,940 | INFO     | collected zombie processes
[2025-02-25 20:13:05] 2025-02-26 01:12:46,940 | INFO     | will attempt to kill all subprocesses of pid=1430342
[2025-02-25 20:13:05] 2025-02-26 01:12:47,114 | INFO     | process IDs to be killed: [1430342] (in reverse order)
[2025-02-25 20:13:05] 2025-02-26 01:12:47,202 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 20:13:05] 2025-02-26 01:12:47,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 20:13:05] 2025-02-26 01:12:47,217 | INFO     | did not find any defunct processes belonging to 1430342
[2025-02-25 20:13:05] 2025-02-26 01:12:47,232 | INFO     | did not find any defunct processes belonging to 1430342
[2025-02-25 20:13:05] 2025-02-26 01:12:47,232 | INFO     | ready for new job
[2025-02-25 20:13:05] 2025-02-26 01:12:47,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 20:13:05] 2025-02-26 01:12:47,234 | INFO     | **************************************
[2025-02-25 20:13:05] 2025-02-26 01:12:47,235 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 20:13:05] 2025-02-26 01:12:47,235 | INFO     | **************************************
[2025-02-25 20:13:05] 2025-02-26 01:12:47,235 | INFO     | 
[2025-02-25 20:13:05] 2025-02-26 01:12:47,249 | INFO     | architecture information:
[2025-02-25 20:13:05] 2025-02-26 01:12:47,249 | INFO     | executing command: cat /etc/os-release
[2025-02-25 20:13:05] 2025-02-26 01:12:47,262 | INFO     | cat /etc/os-release:
[2025-02-25 20:13:05] NAME="CentOS Linux"
[2025-02-25 20:13:05] VERSION="7 (Core)"
[2025-02-25 20:13:05] ID="centos"
[2025-02-25 20:13:05] ID_LIKE="rhel fedora"
[2025-02-25 20:13:05] VERSION_ID="7"
[2025-02-25 20:13:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 20:13:05] ANSI_COLOR="0;31"
[2025-02-25 20:13:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 20:13:05] HOME_URL="https://www.centos.org/"
[2025-02-25 20:13:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 20:13:05] 
[2025-02-25 20:13:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 20:13:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 20:13:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 20:13:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 20:13:05] 
[2025-02-25 20:13:05] 2025-02-26 01:12:47,262 | INFO     | **************************************
[2025-02-25 20:13:05] 2025-02-26 01:12:47,765 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 20:13:05] 2025-02-26 01:12:47,782 | INFO     | sufficient remaining disk space (74496081920 B)
[2025-02-25 20:13:05] 2025-02-26 01:12:47,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 20:13:05] 2025-02-26 01:12:47,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 20:13:05] 2025-02-26 01:12:47,783 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 20:13:05] 2025-02-26 01:12:47,783 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 20:13:05] 2025-02-26 01:12:47,783 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 20:13:05] 2025-02-26 01:12:47,783 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 20:13:05] 2025-02-26 01:12:47,964 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 20:13:05] 2025-02-26 01:12:47,964 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 20:13:05] 2025-02-26 01:12:47,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 20:13:05] 2025-02-26 01:12:47,965 | INFO     | will abort loop
[2025-02-25 20:13:05] 2025-02-26 01:12:48,244 | INFO     | all data control threads have been joined
[2025-02-25 20:13:05] 2025-02-26 01:12:48,788 | INFO     | [job] retrieve thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:48,921 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 20:13:05] 2025-02-26 01:12:48,968 | INFO     | [job] job monitor thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:49,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 20:13:05] 2025-02-26 01:12:49,137 | INFO     | all payload control threads have been joined
[2025-02-25 20:13:05] 2025-02-26 01:12:49,241 | INFO     | all job control threads have been joined
[2025-02-25 20:13:05] 2025-02-26 01:12:49,245 | INFO     | [data] control thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:49,362 | INFO     | [payload] failed_post thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:49,794 | INFO     | [payload] validate_post thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:49,858 | INFO     | [job] validate thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:50,061 | INFO     | [data] copytool_in thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:50,109 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:50,138 | INFO     | [payload] control thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:50,231 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:50,247 | INFO     | [job] control thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:50,266 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:50,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 20:13:05] 2025-02-26 01:12:50,927 | INFO     | [data] copytool_out thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:51,479 | INFO     | [job] queue monitor thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:53,010 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:12:58,505 | INFO     | job.realtimelogging is not enabled
[2025-02-25 20:13:05] 2025-02-26 01:12:59,511 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 20:13:05] 2025-02-26 01:13:00,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139913272600384)>', '<ExcThread(monitor, started 139912502302464)>']
[2025-02-25 20:13:05] 2025-02-26 01:13:00,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 20:13:05] 2025-02-26 01:13:00,846 | INFO     | [monitor] control thread has ended
[2025-02-25 20:13:05] 2025-02-26 01:13:05,036 | INFO     | all workflow threads have been joined
[2025-02-25 20:13:05] 2025-02-26 01:13:05,037 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 20:13:05] 2025-02-26 01:13:05,037 | INFO     | traces error code: 0
[2025-02-25 20:13:05] 2025-02-26 01:13:05,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 20:13:05] 2025-02-26 01:13:05,259 [wrapper] ==== pilot stdout END ====
[2025-02-25 20:13:05] 2025-02-26 01:13:05,261 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 20:13:05] 2025-02-26 01:13:05,262 [wrapper] pilotpid: 1422842
[2025-02-25 20:13:05] 2025-02-26 01:13:05,264 [wrapper] Pilot exit status: 0
[2025-02-25 20:13:05] 2025-02-26 01:13:05,274 [wrapper] pandaids: 6531021681
[2025-02-25 20:13:05] 2025-02-26 01:13:05,328 [wrapper] cleanup supervisor_pilot 1770831 1422843
[2025-02-25 20:13:05] 2025-02-26 01:13:05,330 [wrapper] Test setup, not cleaning
[2025-02-25 20:13:05] 2025-02-26 01:13:05,335 [wrapper] apfmon messages muted
[2025-02-25 20:13:05] 2025-02-26 01:13:05,336 [wrapper] ==== wrapper stdout END ====
[2025-02-25 20:13:05] 2025-02-26 01:13:05,338 [wrapper] ==== wrapper stderr END ====
[2025-02-25 20:13:05]  *** Error codes and diagnostics ***
[2025-02-25 20:13:05]     "exeErrorCode": 0,
[2025-02-25 20:13:05]     "exeErrorDiag": "",
[2025-02-25 20:13:05]     "pilotErrorCode": 0,
[2025-02-25 20:13:05]     "pilotErrorDiag": "",
[2025-02-25 20:13:05]  *** Listing of results directory ***
[2025-02-25 20:13:05] total 430284
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 16:07 pilot3.tar.gz
[2025-02-25 20:13:05] -rwx------. 1 boincer umatlas     35865 Feb 25 16:51 runpilot2-wrapper.sh
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 16:51 queuedata.json
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas       100 Feb 25 18:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 20:13:05] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 18:56 run_atlas
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas       105 Feb 25 18:56 job.xml
[2025-02-25 20:13:05] -rw-r--r--. 2 boincer umatlas 250427393 Feb 25 18:56 EVNT.43401153._000001.pool.root.1
[2025-02-25 20:13:05] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 18:56 start_atlas.sh
[2025-02-25 20:13:05] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 18:56 shared
[2025-02-25 20:13:05] -rw-r--r--. 2 boincer umatlas    503534 Feb 25 18:56 input.tar.gz
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas         0 Feb 25 18:56 boinc_lockfile
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas      2531 Feb 25 18:56 pandaJob.out
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas       467 Feb 25 18:56 setup.sh.local
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas    987490 Feb 25 18:56 agis_schedconf.cvmfs.json
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas   1573632 Feb 25 18:56 agis_ddmendpoints.agis.ALL.json
[2025-02-25 20:13:05] drwx------. 4 boincer umatlas      4096 Feb 25 18:57 pilot3
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas 184844579 Feb 25 20:12 HITS.43401155._000009.pool.root.1
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas       529 Feb 25 20:12 boinc_task_state.xml
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas      1035 Feb 25 20:12 memory_monitor_summary.json
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas      6840 Feb 25 20:12 init_data.xml
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas    315163 Feb 25 20:12 log.43401155._000009.job.log.tgz.1
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas        95 Feb 25 20:12 pilot_heartbeat.json
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas      7718 Feb 25 20:12 heartbeat.json
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas        27 Feb 25 20:13 wrapper_checkpoint.txt
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 20:13 boinc_mmap_file
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas      4596 Feb 25 20:13 pilotlog.txt
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas    454105 Feb 25 20:13 log.43401155._000009.job.log.1
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas       357 Feb 25 20:13 output.list
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas       620 Feb 25 20:13 runtime_log
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas    788480 Feb 25 20:13 result.tar.gz
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 20:13 runtime_log.err
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas       652 Feb 25 20:13 iCYLDmL1H76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmq9wKDmEbKVrn.diag
[2025-02-25 20:13:05] -rw-r--r--. 1 boincer umatlas     21916 Feb 25 20:13 stderr.txt
[2025-02-25 20:13:05] HITS file was successfully produced:
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas 184844579 Feb 25 20:12 shared/HITS.pool.root.1
[2025-02-25 20:13:05]  *** Contents of shared directory: ***
[2025-02-25 20:13:05] total 426368
[2025-02-25 20:13:05] -rw-r--r--. 2 boincer umatlas 250427393 Feb 25 18:56 ATLAS.root_0
[2025-02-25 20:13:05] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 18:56 start_atlas.sh
[2025-02-25 20:13:05] -rw-r--r--. 2 boincer umatlas    503534 Feb 25 18:56 input.tar.gz
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas 184844579 Feb 25 20:12 HITS.pool.root.1
[2025-02-25 20:13:05] -rw-------. 1 boincer umatlas    788480 Feb 25 20:13 result.tar.gz
20:13:07 (1418564): run_atlas exited; CPU time 32218.912920
20:13:07 (1418564): called boinc_finish(0)

</stderr_txt>
]]>

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