Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:07:22 (31229): wrapper (7.7.26015): starting
18:07:22 (31229): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 18:07:22] Arguments: --nthreads 12
[2025-02-25 18:07:22] Threads: 12
[2025-02-25 18:07:22] Checking for CVMFS
[2025-02-25 18:07:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 18:07:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 18:07:22] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 18:07:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 18:07:22] 2.11.2.0 10995 118622 138044 143055 2 55 14661767 20275200 1 130560 0 24700823 99.985 7998765 41130 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-02-25 18:07:22] CVMFS is ok
[2025-02-25 18:07:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 18:07:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 18:07:22] Further information can be found at the LHC@home message board.
[2025-02-25 18:07:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 18:07:22] Checking for apptainer binary...
[2025-02-25 18:07:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 18:07:22] Running /usr/bin/apptainer --version
[2025-02-25 18:07:22] apptainer version 1.3.2-1.el7
[2025-02-25 18:07:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 18:07:24] c-205-22.aglt2.org
[2025-02-25 18:07:24] apptainer works
[2025-02-25 18:07:24] Set ATHENA_PROC_NUMBER=12
[2025-02-25 18:07:24] Set ATHENA_CORE_NUMBER=12
[2025-02-25 18:07:24] Starting ATLAS job with PandaID=6531060235
[2025-02-25 18:07:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 19:34:16]  *** The last 200 lines of the pilot log: ***
[2025-02-25 19:34:16]  status=None
[2025-02-25 19:34:16]  status_code=0
[2025-02-25 19:34:16]  storage_token=
[2025-02-25 19:34:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6531060235/log.43401155._000766.job.log.tgz.1
[2025-02-25 19:34:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/e3/log.43401155._000766.job.log.tgz.1
[2025-02-25 19:34:16]  workdir=None
[2025-02-25 19:34:16] ]
[2025-02-25 19:34:16] 2025-02-26 00:33:49,495 | INFO     | transferring file log.43401155._000766.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6531060235/log.43401155._000766.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 19:34:16] 2025-02-26 00:33:49,495 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6531060235/log.43401155._000766.job.log.tgz.1 /tmp/boinchome/slots/0/log.43401155._000766.job
[2025-02-25 19:34:16] 2025-02-26 00:33:49,516 | INFO     | adding to output.list: log.43401155._000766.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/68/e3/log.43401155._000766.job.log.tg
[2025-02-25 19:34:16] 2025-02-26 00:33:49,517 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 19:34:16] 2025-02-26 00:33:49,518 | INFO     | summary of transferred files:
[2025-02-25 19:34:16] 2025-02-26 00:33:49,518 | INFO     |  -- lfn=log.43401155._000766.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 19:34:16] 2025-02-26 00:33:49,518 | INFO     | stage-out finished correctly
[2025-02-25 19:34:16] 2025-02-26 00:33:50,578 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 19:34:16] 2025-02-26 00:33:51,712 | INFO     | job 6531060235 has state=finished
[2025-02-25 19:34:16] 2025-02-26 00:33:51,713 | INFO     | preparing for final server update for job 6531060235 in state='finished'
[2025-02-25 19:34:16] 2025-02-26 00:33:51,713 | INFO     | this job has now completed (state=finished)
[2025-02-25 19:34:16] 2025-02-26 00:33:51,713 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 19:34:16] 2025-02-26 00:33:51,714 | INFO     | log transfer has been attempted: DONE
[2025-02-25 19:34:16] 2025-02-26 00:33:51,714 | INFO     | job 6531060235 has finished - writing final server update
[2025-02-25 19:34:16] 2025-02-26 00:33:51,714 | INFO     | total number of processed events: 400 (read)
[2025-02-25 19:34:16] 2025-02-26 00:33:51,716 | INFO     | executing command: lscpu
[2025-02-25 19:34:16] 2025-02-26 00:33:51,741 | INFO     | found 12 cores (6 cores per socket, 2 sockets)
[2025-02-25 19:34:16] 2025-02-26 00:33:51,755 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 19:34:16] 2025-02-26 00:33:56,803 | INFO     | CPU arch script returned: x86-64-v2
[2025-02-25 19:34:16] 2025-02-26 00:33:56,803 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531060235/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,808 | INFO     | extracted standard info from prmon json
[2025-02-25 19:34:16] 2025-02-26 00:33:56,809 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 19:34:16] 2025-02-26 00:33:56,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 19:34:16] 2025-02-26 00:33:56,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 19:34:16] 2025-02-26 00:33:56,810 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 19:34:16] 2025-02-26 00:33:56,812 | INFO     | fitting pss+swap vs Time
[2025-02-25 19:34:16] 2025-02-26 00:33:56,813 | INFO     | model: linear, x: [1740525191.0, 1740525252.0, 1740525313.0, 1740525374.0, 1740525435.0, 1740525496.0, 1740525557.0, 1740525618.0, 1740525679.0, 1740525740.0, 1740
[2025-02-25 19:34:16] 2025-02-26 00:33:56,813 | INFO     | sum of square deviations: 147126479.5
[2025-02-25 19:34:16] 2025-02-26 00:33:56,814 | INFO     | sum of deviations: 30951738306.000004
[2025-02-25 19:34:16] 2025-02-26 00:33:56,814 | INFO     | mean x: 1740527539.5
[2025-02-25 19:34:16] 2025-02-26 00:33:56,814 | INFO     | mean y: 2573848.9743589745
[2025-02-25 19:34:16] 2025-02-26 00:33:56,814 | INFO     | -- intersect: -366160968567.53595
[2025-02-25 19:34:16] 2025-02-26 00:33:56,814 | INFO     | intersect: -366160968567.53595
[2025-02-25 19:34:16] 2025-02-26 00:33:56,815 | INFO     | chi2: 2.8149047988455456
[2025-02-25 19:34:16] 2025-02-26 00:33:56,815 | INFO     | -- intersect: -366160968567.53595
[2025-02-25 19:34:16] 2025-02-26 00:33:56,815 | INFO     | current memory leak: 210.38 B/s (using 78 data points, chi2=2.81)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,815 | INFO     | ..............................
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | . Timing measurements:
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | . get job = 0 s
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | . initial setup = 2 s
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | . payload setup = 7 s
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | . stage-in = 0 s
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | . payload execution = 5144 s
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | . stage-out = 0 s
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | . log creation = 0 s
[2025-02-25 19:34:16] 2025-02-26 00:33:56,816 | INFO     | ..............................
[2025-02-25 19:34:16] 2025-02-26 00:33:56,890 | WARNING  | process 9002 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 19:34:16] 2025-02-26 00:33:56,905 | INFO     | 
[2025-02-25 19:34:16] 2025-02-26 00:33:56,905 | INFO     | job summary report
[2025-02-25 19:34:16] 2025-02-26 00:33:56,905 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531060235/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,905 | INFO     | --------------------------------------------------
[2025-02-25 19:34:16] 2025-02-26 00:33:56,906 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6531060235/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,906 | INFO     | PanDA job id: 6531060235
[2025-02-25 19:34:16] 2025-02-26 00:33:56,908 | INFO     | task id: 43401155
[2025-02-25 19:34:16] 2025-02-26 00:33:56,908 | INFO     | errors: (none)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,908 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 19:34:16] 2025-02-26 00:33:56,908 | INFO     | pilot state: finished 
[2025-02-25 19:34:16] 2025-02-26 00:33:56,908 | INFO     | transexitcode: 0
[2025-02-25 19:34:16] 2025-02-26 00:33:56,909 | INFO     | exeerrorcode: 0
[2025-02-25 19:34:16] 2025-02-26 00:33:56,909 | INFO     | exeerrordiag: 
[2025-02-25 19:34:16] 2025-02-26 00:33:56,909 | INFO     | exitcode: 0
[2025-02-25 19:34:16] 2025-02-26 00:33:56,909 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4315948 B
[2025-02-25 19:34:16] 2025-02-26 00:33:56,910 | INFO     | exitmsg: OK
[2025-02-25 19:34:16] 2025-02-26 00:33:56,910 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15528 B
[2025-02-25 19:34:16] 2025-02-26 00:33:56,910 | INFO     | cpuconsumptiontime: 47441 s
[2025-02-25 19:34:16] 2025-02-26 00:33:56,910 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 19:34:16] 2025-02-26 00:33:56,911 | INFO     | nevents: 400
[2025-02-25 19:34:16] 2025-02-26 00:33:56,911 | INFO     | neventsw: 0
[2025-02-25 19:34:16] 2025-02-26 00:33:56,915 | INFO     | pid: 9002
[2025-02-25 19:34:16] 2025-02-26 00:33:56,915 | INFO     | pgrp: 9002
[2025-02-25 19:34:16] 2025-02-26 00:33:56,915 | INFO     | corecount: 12
[2025-02-25 19:34:16] 2025-02-26 00:33:56,915 | INFO     | event service: False
[2025-02-25 19:34:16] 2025-02-26 00:33:56,916 | INFO     | sizes: {0: 2370206, 1: 2370405, 6: 2370611, 12: 2370639, 5156: 2396775, 5157: 2405716, 5158: 2405900, 5164: 2406070}
[2025-02-25 19:34:16] 2025-02-26 00:33:56,916 | INFO     | --------------------------------------------------
[2025-02-25 19:34:16] 2025-02-26 00:33:56,916 | INFO     | 
[2025-02-25 19:34:16] 2025-02-26 00:33:56,916 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-02-25 19:34:16] 2025-02-26 00:33:56,930 | INFO     | sufficient remaining disk space (29355933696 B)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,931 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,932 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6531060235: 4617408 B (within 2537553920 B limit)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,932 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6531060235/HITS.43401155._000766.pool.root.1 does not exist (skip from workdir size calculation)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,932 | INFO     | total size of present files: 0 B (workdir size: 4617408 B)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,932 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6531060235/HITS.43401155._000766.pool.root.1 since it does not exist
[2025-02-25 19:34:16] 2025-02-26 00:33:56,943 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,943 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,943 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,943 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,944 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,944 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,944 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,944 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,944 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,944 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,945 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,946 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,946 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 19:34:16] 2025-02-26 00:33:56,946 | INFO     | job 6531060235 has completed (purged errors)
[2025-02-25 19:34:16] 2025-02-26 00:33:56,946 | INFO     | overall cleanup function is called
[2025-02-25 19:34:16] 2025-02-26 00:33:56,995 | INFO     | number of running child processes to parent process 9002: 1
[2025-02-25 19:34:16] 2025-02-26 00:33:56,996 | INFO     | maximum number of monitored processes: 6
[2025-02-25 19:34:16] 2025-02-26 00:33:56,996 | INFO     | aborting job monitoring since job object (job id=6531060235) has expired
[2025-02-25 19:34:16] 2025-02-26 00:33:57,954 | INFO     | --- collectZombieJob: --- 10, [9002]
[2025-02-25 19:34:16] 2025-02-26 00:33:57,954 | INFO     | zombie collector waiting for pid 9002
[2025-02-25 19:34:16] 2025-02-26 00:33:57,955 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 19:34:16] 2025-02-26 00:33:57,955 | INFO     | collected zombie processes
[2025-02-25 19:34:16] 2025-02-26 00:33:57,955 | INFO     | will attempt to kill all subprocesses of pid=9002
[2025-02-25 19:34:16] 2025-02-26 00:33:58,018 | INFO     | process IDs to be killed: [9002] (in reverse order)
[2025-02-25 19:34:16] 2025-02-26 00:33:58,068 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 19:34:16] 2025-02-26 00:33:58,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 19:34:16] 2025-02-26 00:33:58,072 | INFO     | did not find any defunct processes belonging to 9002
[2025-02-25 19:34:16] 2025-02-26 00:33:58,076 | INFO     | did not find any defunct processes belonging to 9002
[2025-02-25 19:34:16] 2025-02-26 00:33:58,076 | INFO     | ready for new job
[2025-02-25 19:34:16] 2025-02-26 00:33:58,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 19:34:16] 2025-02-26 00:33:58,077 | INFO     | **************************************
[2025-02-25 19:34:16] 2025-02-26 00:33:58,077 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 19:34:16] 2025-02-26 00:33:58,077 | INFO     | **************************************
[2025-02-25 19:34:16] 2025-02-26 00:33:58,077 | INFO     | 
[2025-02-25 19:34:16] 2025-02-26 00:33:58,078 | INFO     | architecture information:
[2025-02-25 19:34:16] 2025-02-26 00:33:58,078 | INFO     | executing command: cat /etc/os-release
[2025-02-25 19:34:16] 2025-02-26 00:33:58,094 | INFO     | cat /etc/os-release:
[2025-02-25 19:34:16] NAME="CentOS Linux"
[2025-02-25 19:34:16] VERSION="7 (Core)"
[2025-02-25 19:34:16] ID="centos"
[2025-02-25 19:34:16] ID_LIKE="rhel fedora"
[2025-02-25 19:34:16] VERSION_ID="7"
[2025-02-25 19:34:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 19:34:16] ANSI_COLOR="0;31"
[2025-02-25 19:34:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 19:34:16] HOME_URL="https://www.centos.org/"
[2025-02-25 19:34:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 19:34:16] 
[2025-02-25 19:34:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 19:34:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 19:34:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 19:34:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 19:34:16] 
[2025-02-25 19:34:16] 2025-02-26 00:33:58,094 | INFO     | **************************************
[2025-02-25 19:34:16] 2025-02-26 00:33:58,597 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-02-25 19:34:16] 2025-02-26 00:33:58,665 | INFO     | sufficient remaining disk space (29361176576 B)
[2025-02-25 19:34:16] 2025-02-26 00:33:58,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 19:34:16] 2025-02-26 00:33:58,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 19:34:16] 2025-02-26 00:33:58,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 19:34:16] 2025-02-26 00:33:58,666 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-25 19:34:16] 2025-02-26 00:33:58,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 19:34:16] 2025-02-26 00:33:58,667 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 19:34:16] 2025-02-26 00:33:58,667 | INFO     | aborting loop
[2025-02-25 19:34:16] 2025-02-26 00:33:58,667 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 19:34:16] 2025-02-26 00:33:58,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 19:34:16] 2025-02-26 00:33:58,698 | INFO     | all data control threads have been joined
[2025-02-25 19:34:16] 2025-02-26 00:33:58,776 | INFO     | all payload control threads have been joined
[2025-02-25 19:34:16] 2025-02-26 00:33:59,435 | INFO     | all job control threads have been joined
[2025-02-25 19:34:16] 2025-02-26 00:33:59,668 | INFO     | [job] queue monitor thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:33:59,671 | INFO     | [job] retrieve thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:33:59,673 | INFO     | [job] job monitor thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:33:59,703 | INFO     | [data] control thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:33:59,782 | INFO     | [payload] control thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:00,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 19:34:16] 2025-02-26 00:34:00,173 | INFO     | [payload] failed_post thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:00,176 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:00,273 | INFO     | [job] validate thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:00,326 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:00,440 | INFO     | [job] control thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:00,719 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:00,961 | INFO     | [payload] validate_post thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:01,062 | INFO     | [data] copytool_in thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:01,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 19:34:16] 2025-02-26 00:34:02,122 | INFO     | [data] copytool_out thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:05,173 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:08,844 | INFO     | job.realtimelogging is not enabled
[2025-02-25 19:34:16] 2025-02-26 00:34:09,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 19:34:16] 2025-02-26 00:34:11,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554936538944)>', '<ExcThread(monitor, started 140554113365760)>']
[2025-02-25 19:34:16] 2025-02-26 00:34:11,730 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 19:34:16] 2025-02-26 00:34:11,731 | INFO     | [monitor] control thread has ended
[2025-02-25 19:34:16] 2025-02-26 00:34:16,348 | INFO     | all workflow threads have been joined
[2025-02-25 19:34:16] 2025-02-26 00:34:16,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 19:34:16] 2025-02-26 00:34:16,349 | INFO     | traces error code: 0
[2025-02-25 19:34:16] 2025-02-26 00:34:16,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 19:34:16] 2025-02-26 00:34:16,455 [wrapper] ==== pilot stdout END ====
[2025-02-25 19:34:16] 2025-02-26 00:34:16,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 19:34:16] 2025-02-26 00:34:16,462 [wrapper] pilotpid: 2546
[2025-02-25 19:34:16] 2025-02-26 00:34:16,465 [wrapper] Pilot exit status: 0
[2025-02-25 19:34:16] 2025-02-26 00:34:16,482 [wrapper] pandaids: 6531060235
[2025-02-25 19:34:16] 2025-02-26 00:34:16,520 [wrapper] cleanup supervisor_pilot 21940 2547
[2025-02-25 19:34:16] 2025-02-26 00:34:16,524 [wrapper] Test setup, not cleaning
[2025-02-25 19:34:16] 2025-02-26 00:34:16,531 [wrapper] apfmon messages muted
[2025-02-25 19:34:16] 2025-02-26 00:34:16,535 [wrapper] ==== wrapper stdout END ====
[2025-02-25 19:34:16] 2025-02-26 00:34:16,539 [wrapper] ==== wrapper stderr END ====
[2025-02-25 19:34:16]  *** Error codes and diagnostics ***
[2025-02-25 19:34:16]     "exeErrorCode": 0,
[2025-02-25 19:34:16]     "exeErrorDiag": "",
[2025-02-25 19:34:16]     "pilotErrorCode": 0,
[2025-02-25 19:34:16]     "pilotErrorDiag": "",
[2025-02-25 19:34:16]  *** Listing of results directory ***
[2025-02-25 19:34:16] total 430372
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas    491065 Feb 25 17:04 pilot3.tar.gz
[2025-02-25 19:34:16] -rwx------ 1 boincer umatlas     35865 Feb 25 17:24 runpilot2-wrapper.sh
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas      5118 Feb 25 17:24 queuedata.json
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas       100 Feb 25 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 19:34:16] -rwxr-xr-x 1 boincer umatlas      7986 Feb 25 18:07 run_atlas
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas       105 Feb 25 18:07 job.xml
[2025-02-25 19:34:16] -rw-r--r-- 2 boincer umatlas 250537287 Feb 25 18:07 EVNT.43401153._000031.pool.root.1
[2025-02-25 19:34:16] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 18:07 start_atlas.sh
[2025-02-25 19:34:16] drwxrwx--x 2 boincer umatlas      4096 Feb 25 18:07 shared
[2025-02-25 19:34:16] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 18:07 input.tar.gz
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas         0 Feb 25 18:07 boinc_lockfile
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas      2537 Feb 25 18:07 pandaJob.out
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas       424 Feb 25 18:07 setup.sh.local
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas    987490 Feb 25 18:07 agis_schedconf.cvmfs.json
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas   1573632 Feb 25 18:07 agis_ddmendpoints.agis.ALL.json
[2025-02-25 19:34:16] drwx------ 4 boincer umatlas      4096 Feb 25 18:07 pilot3
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas      5869 Feb 25 19:29 init_data.xml
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas 184656952 Feb 25 19:33 HITS.43401155._000766.pool.root.1
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas        95 Feb 25 19:33 pilot_heartbeat.json
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas      8192 Feb 25 19:33 boinc_mmap_file
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas        27 Feb 25 19:33 wrapper_checkpoint.txt
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas       529 Feb 25 19:33 boinc_task_state.xml
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas      1048 Feb 25 19:33 memory_monitor_summary.json
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas    370976 Feb 25 19:33 log.43401155._000766.job.log.tgz.1
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas      7757 Feb 25 19:33 heartbeat.json
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas      4410 Feb 25 19:34 pilotlog.txt
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas    482554 Feb 25 19:34 log.43401155._000766.job.log.1
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas       357 Feb 25 19:34 output.list
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas       620 Feb 25 19:34 runtime_log
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas    870400 Feb 25 19:34 result.tar.gz
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas       658 Feb 25 19:34 siTLDmVWI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmoHxKDmVJGoUm.diag
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas     11015 Feb 25 19:34 runtime_log.err
[2025-02-25 19:34:16] -rw-r--r-- 1 boincer umatlas     22344 Feb 25 19:34 stderr.txt
[2025-02-25 19:34:16] HITS file was successfully produced:
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas 184656952 Feb 25 19:33 shared/HITS.pool.root.1
[2025-02-25 19:34:16]  *** Contents of shared directory: ***
[2025-02-25 19:34:16] total 426372
[2025-02-25 19:34:16] -rw-r--r-- 2 boincer umatlas 250537287 Feb 25 18:07 ATLAS.root_0
[2025-02-25 19:34:16] -rw-r--r-- 2 boincer umatlas     17569 Feb 25 18:07 start_atlas.sh
[2025-02-25 19:34:16] -rw-r--r-- 2 boincer umatlas    503548 Feb 25 18:07 input.tar.gz
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas 184656952 Feb 25 19:33 HITS.pool.root.1
[2025-02-25 19:34:16] -rw------- 1 boincer umatlas    870400 Feb 25 19:34 result.tar.gz
19:34:18 (31229): run_atlas exited; CPU time 47361.272026
19:34:18 (31229): called boinc_finish(0)

</stderr_txt>
]]>

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