Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:59:09 (3094571): wrapper (7.7.26015): starting
18:59:09 (3094571): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 18:59:09] Arguments: --nthreads 12
[2025-02-25 18:59:09] Threads: 12
[2025-02-25 18:59:09] Checking for CVMFS
[2025-02-25 18:59:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 18:59:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 18:59:09] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 18:59:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 18:59:09] 2.11.5.0 2706 49452 338724 143059 1 316 43960072 45568001 10776 130560 0 214531166 99.626 257781090 24679 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-02-25 18:59:09] CVMFS is ok
[2025-02-25 18:59:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 18:59:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 18:59:09] Further information can be found at the LHC@home message board.
[2025-02-25 18:59:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 18:59:09] Checking for apptainer binary...
[2025-02-25 18:59:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 18:59:09] Running /usr/bin/apptainer --version
[2025-02-25 18:59:09] apptainer version 1.3.5-1.el9
[2025-02-25 18:59:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 18:59:10] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0037.triumf.lcg
[2025-02-25 18:59:10] apptainer works
[2025-02-25 18:59:10] Set ATHENA_PROC_NUMBER=12
[2025-02-25 18:59:10] Set ATHENA_CORE_NUMBER=12
[2025-02-25 18:59:10] Starting ATLAS job with PandaID=6531064901
[2025-02-25 18:59:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 20:19:05]  *** The last 200 lines of the pilot log: ***
[2025-02-25 20:19:05]  filetype=log
[2025-02-25 20:19:05]  guid=0ab181fc-3b72-442c-979e-f6ab54b7d685
[2025-02-25 20:19:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 20:19:05]  is_altstaged=None
[2025-02-25 20:19:05]  is_tar=False
[2025-02-25 20:19:05]  lfn=log.43401155._001876.job.log.tgz.1
[2025-02-25 20:19:05]  mtime=0
[2025-02-25 20:19:05]  protocol_id=None
[2025-02-25 20:19:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 20:19:05]  replicas=None
[2025-02-25 20:19:05]  scope=mc23_13p6TeV
[2025-02-25 20:19:05]  status=None
[2025-02-25 20:19:05]  status_code=0
[2025-02-25 20:19:05]  storage_token=
[2025-02-25 20:19:05]  surl=/home/boinc/slots/0/PanDA_Pilot-6531064901/log.43401155._001876.job.log.tgz.1
[2025-02-25 20:19:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/d3/log.43401155._001876.job.log.tgz.1
[2025-02-25 20:19:05]  workdir=None
[2025-02-25 20:19:05] ]
[2025-02-25 20:19:05] 2025-02-26 04:18:38,847 | INFO     | transferring file log.43401155._001876.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6531064901/log.43401155._001876.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-02-25 20:19:05] 2025-02-26 04:18:38,847 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6531064901/log.43401155._001876.job.log.tgz.1 /home/boinc/slots/0/log.43401155._001876.job.log.t
[2025-02-25 20:19:05] 2025-02-26 04:18:38,860 | INFO     | adding to output.list: log.43401155._001876.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/70/d3/log.43401155._001876.job.log.tg
[2025-02-25 20:19:05] 2025-02-26 04:18:38,861 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 20:19:05] 2025-02-26 04:18:38,861 | INFO     | summary of transferred files:
[2025-02-25 20:19:05] 2025-02-26 04:18:38,861 | INFO     |  -- lfn=log.43401155._001876.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 20:19:05] 2025-02-26 04:18:38,861 | INFO     | stage-out finished correctly
[2025-02-25 20:19:05] 2025-02-26 04:18:40,892 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 20:19:05] 2025-02-26 04:18:41,181 | INFO     | monitor loop #348: job 0:6531064901 is in state 'finished'
[2025-02-25 20:19:05] 2025-02-26 04:18:41,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 20:19:05] 2025-02-26 04:18:41,577 | INFO     | job 6531064901 has state=finished
[2025-02-25 20:19:05] 2025-02-26 04:18:41,577 | INFO     | preparing for final server update for job 6531064901 in state='finished'
[2025-02-25 20:19:05] 2025-02-26 04:18:41,856 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-02-25 20:19:05] 2025-02-26 04:18:41,857 | INFO     | this job has now completed (state=finished)
[2025-02-25 20:19:05] 2025-02-26 04:18:41,857 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 20:19:05] 2025-02-26 04:18:41,857 | INFO     | log transfer has been attempted: DONE
[2025-02-25 20:19:05] 2025-02-26 04:18:41,857 | INFO     | job 6531064901 has finished - writing final server update
[2025-02-25 20:19:05] 2025-02-26 04:18:41,857 | INFO     | total number of processed events: 400 (read)
[2025-02-25 20:19:05] 2025-02-26 04:18:41,860 | INFO     | executing command: lscpu
[2025-02-25 20:19:05] 2025-02-26 04:18:41,893 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-25 20:19:05] 2025-02-26 04:18:41,907 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 20:19:05] 2025-02-26 04:18:43,684 | INFO     | monitor loop #349: job 0:6531064901 is in state 'finished'
[2025-02-25 20:19:05] 2025-02-26 04:18:43,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 20:19:05] 2025-02-26 04:18:44,695 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 20:19:05] 2025-02-26 04:18:44,695 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6531064901/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 20:19:05] 2025-02-26 04:18:44,695 | INFO     | extracted standard info from prmon json
[2025-02-25 20:19:05] 2025-02-26 04:18:44,695 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 20:19:05] 2025-02-26 04:18:44,696 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 20:19:05] 2025-02-26 04:18:44,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 20:19:05] 2025-02-26 04:18:44,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 20:19:05] 2025-02-26 04:18:44,697 | INFO     | fitting pss+swap vs Time
[2025-02-25 20:19:05] 2025-02-26 04:18:44,697 | INFO     | model: linear, x: [1740539084.0, 1740539145.0, 1740539206.0, 1740539267.0, 1740539328.0, 1740539389.0, 1740539450.0, 1740539511.0, 1740539572.0, 1740539633.0, 1740
[2025-02-25 20:19:05] 2025-02-26 04:18:44,697 | INFO     | sum of square deviations: 110949621.83098586
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | sum of deviations: 20244357140.281685
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | mean x: 1740541219.2112677
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | mean y: 2608691.647887324
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | -- intersect: -317584215648.9603
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | intersect: -317584215648.9603
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | chi2: 1.3776850627459953
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | -- intersect: -317584215648.9603
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | current memory leak: 182.46 B/s (using 71 data points, chi2=1.38)
[2025-02-25 20:19:05] 2025-02-26 04:18:44,698 | INFO     | ..............................
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | . Timing measurements:
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | . get job = 0 s
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | . initial setup = 2 s
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | . payload setup = 3 s
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | . stage-in = 0 s
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | . payload execution = 4739 s
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | . stage-out = 0 s
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | . log creation = 0 s
[2025-02-25 20:19:05] 2025-02-26 04:18:44,699 | INFO     | ..............................
[2025-02-25 20:19:05] 2025-02-26 04:18:45,083 | INFO     | 
[2025-02-25 20:19:05] 2025-02-26 04:18:45,083 | INFO     | job summary report
[2025-02-25 20:19:05] 2025-02-26 04:18:45,083 | INFO     | --------------------------------------------------
[2025-02-25 20:19:05] 2025-02-26 04:18:45,083 | INFO     | PanDA job id: 6531064901
[2025-02-25 20:19:05] 2025-02-26 04:18:45,083 | INFO     | task id: 43401155
[2025-02-25 20:19:05] 2025-02-26 04:18:45,083 | INFO     | errors: (none)
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | pilot state: finished 
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | transexitcode: 0
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | exeerrorcode: 0
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | exeerrordiag: 
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | exitcode: 0
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | exitmsg: OK
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | cpuconsumptiontime: 26142 s
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | nevents: 400
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | neventsw: 0
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | pid: 3104561
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | pgrp: 3104561
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | corecount: 12
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | event service: False
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | sizes: {0: 2370372, 3: 2370578, 11: 2370606, 4746: 2396775, 4747: 2405710, 4749: 2405766, 4753: 2406064}
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | --------------------------------------------------
[2025-02-25 20:19:05] 2025-02-26 04:18:45,084 | INFO     | 
[2025-02-25 20:19:05] 2025-02-26 04:18:45,085 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,099 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | job 6531064901 has completed (purged errors)
[2025-02-25 20:19:05] 2025-02-26 04:18:45,100 | INFO     | overall cleanup function is called
[2025-02-25 20:19:05] 2025-02-26 04:18:46,107 | INFO     | --- collectZombieJob: --- 10, [3104561]
[2025-02-25 20:19:05] 2025-02-26 04:18:46,107 | INFO     | zombie collector waiting for pid 3104561
[2025-02-25 20:19:05] 2025-02-26 04:18:46,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 20:19:05] 2025-02-26 04:18:46,107 | INFO     | collected zombie processes
[2025-02-25 20:19:05] 2025-02-26 04:18:46,107 | INFO     | will attempt to kill all subprocesses of pid=3104561
[2025-02-25 20:19:05] 2025-02-26 04:18:46,186 | INFO     | process IDs to be killed: [3104561] (in reverse order)
[2025-02-25 20:19:05] 2025-02-26 04:18:46,244 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 20:19:05] 2025-02-26 04:18:46,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 20:19:05] 2025-02-26 04:18:46,252 | INFO     | did not find any defunct processes belonging to 3104561
[2025-02-25 20:19:05] 2025-02-26 04:18:46,258 | INFO     | did not find any defunct processes belonging to 3104561
[2025-02-25 20:19:05] 2025-02-26 04:18:46,258 | INFO     | ready for new job
[2025-02-25 20:19:05] 2025-02-26 04:18:46,258 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 20:19:05] 2025-02-26 04:18:46,260 | INFO     | **************************************
[2025-02-25 20:19:05] 2025-02-26 04:18:46,260 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 20:19:05] 2025-02-26 04:18:46,260 | INFO     | **************************************
[2025-02-25 20:19:05] 2025-02-26 04:18:46,260 | INFO     | 
[2025-02-25 20:19:05] 2025-02-26 04:18:46,262 | INFO     | architecture information:
[2025-02-25 20:19:05] 2025-02-26 04:18:46,262 | INFO     | executing command: cat /etc/os-release
[2025-02-25 20:19:05] 2025-02-26 04:18:46,272 | INFO     | cat /etc/os-release:
[2025-02-25 20:19:05] NAME="CentOS Linux"
[2025-02-25 20:19:05] VERSION="7 (Core)"
[2025-02-25 20:19:05] ID="centos"
[2025-02-25 20:19:05] ID_LIKE="rhel fedora"
[2025-02-25 20:19:05] VERSION_ID="7"
[2025-02-25 20:19:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 20:19:05] ANSI_COLOR="0;31"
[2025-02-25 20:19:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 20:19:05] HOME_URL="https://www.centos.org/"
[2025-02-25 20:19:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 20:19:05] 
[2025-02-25 20:19:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 20:19:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 20:19:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 20:19:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 20:19:05] 
[2025-02-25 20:19:05] 2025-02-26 04:18:46,272 | INFO     | **************************************
[2025-02-25 20:19:05] 2025-02-26 04:18:46,774 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-02-25 20:19:05] 2025-02-26 04:18:46,785 | INFO     | sufficient remaining disk space (1984540180480 B)
[2025-02-25 20:19:05] 2025-02-26 04:18:46,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 20:19:05] 2025-02-26 04:18:46,785 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 20:19:05] 2025-02-26 04:18:46,814 | INFO     | all payload control threads have been joined
[2025-02-25 20:19:05] 2025-02-26 04:18:46,824 | INFO     | all data control threads have been joined
[2025-02-25 20:19:05] 2025-02-26 04:18:46,922 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 20:19:05] 2025-02-26 04:18:46,948 | INFO     | all job control threads have been joined
[2025-02-25 20:19:05] 2025-02-26 04:18:46,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 20:19:05] 2025-02-26 04:18:47,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 20:19:05] 2025-02-26 04:18:47,194 | INFO     | aborting loop
[2025-02-25 20:19:05] 2025-02-26 04:18:47,413 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 20:19:05] 2025-02-26 04:18:47,413 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 20:19:05] 2025-02-26 04:18:47,413 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 20:19:05] 2025-02-26 04:18:47,790 | INFO     | [job] retrieve thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:47,819 | INFO     | [payload] control thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:47,828 | INFO     | [data] control thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:47,953 | INFO     | [job] control thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:48,199 | INFO     | [job] job monitor thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:48,258 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:48,457 | INFO     | [data] copytool_in thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:48,590 | INFO     | [job] validate thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:48,915 | INFO     | [payload] validate_post thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:48,923 | INFO     | [data] copytool_out thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:48,926 | INFO     | [payload] failed_post thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:49,085 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:49,120 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:49,764 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 20:19:05] 2025-02-26 04:18:50,769 | INFO     | [job] queue monitor thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:50,955 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:18:57,507 | INFO     | job.realtimelogging is not enabled
[2025-02-25 20:19:05] 2025-02-26 04:18:58,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 20:19:05] 2025-02-26 04:19:00,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825286969152)>', '<ExcThread(monitor, started 139824891664128)>']
[2025-02-25 20:19:05] 2025-02-26 04:19:01,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 20:19:05] 2025-02-26 04:19:01,481 | INFO     | [monitor] control thread has ended
[2025-02-25 20:19:05] 2025-02-26 04:19:05,617 | INFO     | all workflow threads have been joined
[2025-02-25 20:19:05] 2025-02-26 04:19:05,617 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 20:19:05] 2025-02-26 04:19:05,617 | INFO     | traces error code: 0
[2025-02-25 20:19:05] 2025-02-26 04:19:05,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 20:19:05] 2025-02-26 04:19:05,748 [wrapper] ==== pilot stdout END ====
[2025-02-25 20:19:05] 2025-02-26 04:19:05,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 20:19:05] 2025-02-26 04:19:05,752 [wrapper] pilotpid: 3098163
[2025-02-25 20:19:05] 2025-02-26 04:19:05,753 [wrapper] Pilot exit status: 0
[2025-02-25 20:19:05] 2025-02-26 04:19:05,761 [wrapper] pandaids: 6531064901
[2025-02-25 20:19:05] 2025-02-26 04:19:05,798 [wrapper] cleanup supervisor_pilot 3434799 3098164
[2025-02-25 20:19:05] 2025-02-26 04:19:05,800 [wrapper] Test setup, not cleaning
[2025-02-25 20:19:05] 2025-02-26 04:19:05,804 [wrapper] apfmon messages muted
[2025-02-25 20:19:05] 2025-02-26 04:19:05,806 [wrapper] ==== wrapper stdout END ====
[2025-02-25 20:19:05] 2025-02-26 04:19:05,807 [wrapper] ==== wrapper stderr END ====
[2025-02-25 20:19:05]  *** Error codes and diagnostics ***
[2025-02-25 20:19:05]     "exeErrorCode": 0,
[2025-02-25 20:19:05]     "exeErrorDiag": "",
[2025-02-25 20:19:05]     "pilotErrorCode": 0,
[2025-02-25 20:19:05]     "pilotErrorDiag": "",
[2025-02-25 20:19:05]  *** Listing of results directory ***
[2025-02-25 20:19:05] total 436576
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc    491065 Feb 25 14:04 pilot3.tar.gz
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc      5118 Feb 25 14:21 queuedata.json
[2025-02-25 20:19:05] -rwx------. 1 boinc boinc     35865 Feb 25 14:21 runpilot2-wrapper.sh
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc       100 Feb 25 18:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 20:19:05] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 18:59 run_atlas
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc       105 Feb 25 18:59 job.xml
[2025-02-25 20:19:05] -rw-r--r--. 2 boinc boinc 255050365 Feb 25 18:59 EVNT.43401153._000076.pool.root.1
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc      6603 Feb 25 18:59 init_data.xml
[2025-02-25 20:19:05] -rw-r--r--. 2 boinc boinc     17569 Feb 25 18:59 start_atlas.sh
[2025-02-25 20:19:05] drwxrwx--x. 2 boinc boinc      4096 Feb 25 18:59 shared
[2025-02-25 20:19:05] -rw-r--r--. 2 boinc boinc    503548 Feb 25 18:59 input.tar.gz
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc         0 Feb 25 18:59 boinc_lockfile
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc      2536 Feb 25 18:59 pandaJob.out
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc       424 Feb 25 18:59 setup.sh.local
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc    987482 Feb 25 18:59 agis_schedconf.cvmfs.json
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc   1573632 Feb 25 18:59 agis_ddmendpoints.agis.ALL.json
[2025-02-25 20:19:05] drwx------. 4 boinc boinc      4096 Feb 25 18:59 pilot3
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc 186578416 Feb 25 20:18 HITS.43401155._001876.pool.root.1
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc       530 Feb 25 20:18 boinc_task_state.xml
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc      1051 Feb 25 20:18 memory_monitor_summary.json
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc        95 Feb 25 20:18 pilot_heartbeat.json
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc    350887 Feb 25 20:18 log.43401155._001876.job.log.tgz.1
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc      7732 Feb 25 20:18 heartbeat.json
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc        27 Feb 25 20:19 wrapper_checkpoint.txt
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc      8192 Feb 25 20:19 boinc_mmap_file
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc      4286 Feb 25 20:19 pilotlog.txt
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc    463769 Feb 25 20:19 log.43401155._001876.job.log.1
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc       357 Feb 25 20:19 output.list
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc       620 Feb 25 20:19 runtime_log
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc    829440 Feb 25 20:19 result.tar.gz
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc     11144 Feb 25 20:19 runtime_log.err
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc       659 Feb 25 20:19 4XMMDmRUI76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1CxKDmhqjVwn.diag
[2025-02-25 20:19:05] -rw-r--r--. 1 boinc boinc     21500 Feb 25 20:19 stderr.txt
[2025-02-25 20:19:05] HITS file was successfully produced:
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc 186578416 Feb 25 20:18 shared/HITS.pool.root.1
[2025-02-25 20:19:05]  *** Contents of shared directory: ***
[2025-02-25 20:19:05] total 432612
[2025-02-25 20:19:05] -rw-r--r--. 2 boinc boinc 255050365 Feb 25 18:59 ATLAS.root_0
[2025-02-25 20:19:05] -rw-r--r--. 2 boinc boinc     17569 Feb 25 18:59 start_atlas.sh
[2025-02-25 20:19:05] -rw-r--r--. 2 boinc boinc    503548 Feb 25 18:59 input.tar.gz
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc 186578416 Feb 25 20:18 HITS.pool.root.1
[2025-02-25 20:19:05] -rw-------. 1 boinc boinc    829440 Feb 25 20:19 result.tar.gz
20:19:06 (3094571): run_atlas exited; CPU time 26097.295480
20:19:06 (3094571): called boinc_finish(0)

</stderr_txt>
]]>

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