Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:59:20 (3935841): wrapper (7.7.26015): starting
17:59:20 (3935841): wrapper: running run_atlas (--nthreads 12)
[2025-02-25 17:59:20] Arguments: --nthreads 12
[2025-02-25 17:59:20] Threads: 12
[2025-02-25 17:59:20] Checking for CVMFS
[2025-02-25 17:59:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 17:59:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 17:59:20] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 17:59:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 17:59:20] 2.11.5.0 627289 32678 232436 143058 0 541 42186754 45568001 11820 130560 0 161176271 99.633 194916631 25090 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-02-25 17:59:20] CVMFS is ok
[2025-02-25 17:59:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 17:59:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 17:59:20] Further information can be found at the LHC@home message board.
[2025-02-25 17:59:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 17:59:20] Checking for apptainer binary...
[2025-02-25 17:59:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 17:59:20] Running /usr/bin/apptainer --version
[2025-02-25 17:59:20] apptainer version 1.3.5-1.el9
[2025-02-25 17:59:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 17:59:20] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0076.triumf.lcg
[2025-02-25 17:59:20] apptainer works
[2025-02-25 17:59:20] Set ATHENA_PROC_NUMBER=12
[2025-02-25 17:59:20] Set ATHENA_CORE_NUMBER=12
[2025-02-25 17:59:20] Starting ATLAS job with PandaID=6531021757
[2025-02-25 17:59:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 18:55:46]  *** The last 200 lines of the pilot log: ***
[2025-02-25 18:55:46]  lfn=log.43401155._000085.job.log.tgz.1
[2025-02-25 18:55:46]  mtime=0
[2025-02-25 18:55:46]  protocol_id=None
[2025-02-25 18:55:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 18:55:46]  replicas=None
[2025-02-25 18:55:46]  scope=mc23_13p6TeV
[2025-02-25 18:55:46]  status=None
[2025-02-25 18:55:46]  status_code=0
[2025-02-25 18:55:46]  storage_token=
[2025-02-25 18:55:46]  surl=/home/boinc/slots/0/PanDA_Pilot-6531021757/log.43401155._000085.job.log.tgz.1
[2025-02-25 18:55:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/26/log.43401155._000085.job.log.tgz.1
[2025-02-25 18:55:46]  workdir=None
[2025-02-25 18:55:46] ]
[2025-02-25 18:55:46] 2025-02-26 02:55:20,314 | INFO     | transferring file log.43401155._000085.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6531021757/log.43401155._000085.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-02-25 18:55:46] 2025-02-26 02:55:20,314 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6531021757/log.43401155._000085.job.log.tgz.1 /home/boinc/slots/0/log.43401155._000085.job.log.t
[2025-02-25 18:55:46] 2025-02-26 02:55:20,326 | INFO     | adding to output.list: log.43401155._000085.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/26/log.43401155._000085.job.log.tg
[2025-02-25 18:55:46] 2025-02-26 02:55:20,326 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 18:55:46] 2025-02-26 02:55:20,326 | INFO     | summary of transferred files:
[2025-02-25 18:55:46] 2025-02-26 02:55:20,326 | INFO     |  -- lfn=log.43401155._000085.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 18:55:46] 2025-02-26 02:55:20,327 | INFO     | stage-out finished correctly
[2025-02-25 18:55:46] 2025-02-26 02:55:22,433 | INFO     | PID=3941253 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 18:55:46] 2025-02-26 02:55:22,434 | INFO     | .. there are 27 such processes running
[2025-02-25 18:55:46] 2025-02-26 02:55:22,650 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 18:55:46] 2025-02-26 02:55:22,677 | INFO     | monitor loop #252: job 0:6531021757 is in state 'finished'
[2025-02-25 18:55:46] 2025-02-26 02:55:22,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 18:55:46] 2025-02-26 02:55:25,203 | INFO     | monitor loop #253: job 0:6531021757 is in state 'finished'
[2025-02-25 18:55:46] 2025-02-26 02:55:25,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 18:55:46] 2025-02-26 02:55:25,325 | INFO     | job 6531021757 has state=finished
[2025-02-25 18:55:46] 2025-02-26 02:55:25,325 | INFO     | preparing for final server update for job 6531021757 in state='finished'
[2025-02-25 18:55:46] 2025-02-26 02:55:25,326 | INFO     | this job has now completed (state=finished)
[2025-02-25 18:55:46] 2025-02-26 02:55:25,326 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 18:55:46] 2025-02-26 02:55:25,326 | INFO     | log transfer has been attempted: DONE
[2025-02-25 18:55:46] 2025-02-26 02:55:25,326 | INFO     | job 6531021757 has finished - writing final server update
[2025-02-25 18:55:46] 2025-02-26 02:55:25,326 | INFO     | total number of processed events: 400 (read)
[2025-02-25 18:55:46] 2025-02-26 02:55:25,328 | INFO     | executing command: lscpu
[2025-02-25 18:55:46] 2025-02-26 02:55:25,361 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2025-02-25 18:55:46] 2025-02-26 02:55:25,374 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 18:55:46] 2025-02-26 02:55:27,706 | INFO     | monitor loop #254: job 0:6531021757 is in state 'finished'
[2025-02-25 18:55:46] 2025-02-26 02:55:27,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 18:55:46] 2025-02-26 02:55:28,074 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 18:55:46] 2025-02-26 02:55:28,075 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6531021757/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 18:55:46] 2025-02-26 02:55:28,075 | INFO     | extracted standard info from prmon json
[2025-02-25 18:55:46] 2025-02-26 02:55:28,075 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 18:55:46] 2025-02-26 02:55:28,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 18:55:46] 2025-02-26 02:55:28,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 18:55:46] 2025-02-26 02:55:28,076 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | fitting pss+swap vs Time
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | model: linear, x: [1740535496.0, 1740535557.0, 1740535618.0, 1740535679.0, 1740535740.0, 1740535801.0, 1740535862.0, 1740535923.0, 1740535984.0, 1740536045.0, 1740
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | sum of square deviations: 34276205.97916672
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | sum of deviations: 13958178184.020834
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | mean x: 1740536929.5208333
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | mean y: 2512510.4791666665
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | -- intersect: -708790187967.712
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | intersect: -708790187967.712
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | chi2: 1.610145250002719
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | -- intersect: -708790187967.712
[2025-02-25 18:55:46] 2025-02-26 02:55:28,077 | INFO     | current memory leak: 407.23 B/s (using 48 data points, chi2=1.61)
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | ..............................
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | . Timing measurements:
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | . get job = 0 s
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | . initial setup = 3 s
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | . payload setup = 4 s
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | . stage-in = 0 s
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | . payload execution = 3327 s
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | . stage-out = 0 s
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | . log creation = 0 s
[2025-02-25 18:55:46] 2025-02-26 02:55:28,078 | INFO     | ..............................
[2025-02-25 18:55:46] 2025-02-26 02:55:28,130 | INFO     | 
[2025-02-25 18:55:46] 2025-02-26 02:55:28,130 | INFO     | job summary report
[2025-02-25 18:55:46] 2025-02-26 02:55:28,130 | INFO     | --------------------------------------------------
[2025-02-25 18:55:46] 2025-02-26 02:55:28,130 | INFO     | PanDA job id: 6531021757
[2025-02-25 18:55:46] 2025-02-26 02:55:28,130 | INFO     | task id: 43401155
[2025-02-25 18:55:46] 2025-02-26 02:55:28,130 | INFO     | errors: (none)
[2025-02-25 18:55:46] 2025-02-26 02:55:28,130 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | pilot state: finished 
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | transexitcode: 0
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | exeerrorcode: 0
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | exeerrordiag: 
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | exitcode: 0
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | exitmsg: OK
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | cpuconsumptiontime: 26629 s
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | nevents: 400
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | neventsw: 0
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | pid: 3949572
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | pgrp: 3949572
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | corecount: 12
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | event service: False
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | sizes: {0: 2370368, 3: 2370574, 11: 2370602, 3334: 2396169, 3336: 2405104, 3339: 2405160, 3344: 2405458}
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | --------------------------------------------------
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | 
[2025-02-25 18:55:46] 2025-02-26 02:55:28,131 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,144 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | job 6531021757 has completed (purged errors)
[2025-02-25 18:55:46] 2025-02-26 02:55:28,145 | INFO     | overall cleanup function is called
[2025-02-25 18:55:46] 2025-02-26 02:55:29,152 | INFO     | --- collectZombieJob: --- 10, [3949572]
[2025-02-25 18:55:46] 2025-02-26 02:55:29,152 | INFO     | zombie collector waiting for pid 3949572
[2025-02-25 18:55:46] 2025-02-26 02:55:29,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 18:55:46] 2025-02-26 02:55:29,152 | INFO     | collected zombie processes
[2025-02-25 18:55:46] 2025-02-26 02:55:29,152 | INFO     | will attempt to kill all subprocesses of pid=3949572
[2025-02-25 18:55:46] 2025-02-26 02:55:29,244 | INFO     | process IDs to be killed: [3949572] (in reverse order)
[2025-02-25 18:55:46] 2025-02-26 02:55:29,309 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 18:55:46] 2025-02-26 02:55:29,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 18:55:46] 2025-02-26 02:55:29,316 | INFO     | did not find any defunct processes belonging to 3949572
[2025-02-25 18:55:46] 2025-02-26 02:55:29,323 | INFO     | did not find any defunct processes belonging to 3949572
[2025-02-25 18:55:46] 2025-02-26 02:55:29,323 | INFO     | ready for new job
[2025-02-25 18:55:46] 2025-02-26 02:55:29,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 18:55:46] 2025-02-26 02:55:29,325 | INFO     | **************************************
[2025-02-25 18:55:46] 2025-02-26 02:55:29,325 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 18:55:46] 2025-02-26 02:55:29,325 | INFO     | **************************************
[2025-02-25 18:55:46] 2025-02-26 02:55:29,325 | INFO     | 
[2025-02-25 18:55:46] 2025-02-26 02:55:29,327 | INFO     | architecture information:
[2025-02-25 18:55:46] 2025-02-26 02:55:29,327 | INFO     | executing command: cat /etc/os-release
[2025-02-25 18:55:46] 2025-02-26 02:55:29,336 | INFO     | cat /etc/os-release:
[2025-02-25 18:55:46] NAME="CentOS Linux"
[2025-02-25 18:55:46] VERSION="7 (Core)"
[2025-02-25 18:55:46] ID="centos"
[2025-02-25 18:55:46] ID_LIKE="rhel fedora"
[2025-02-25 18:55:46] VERSION_ID="7"
[2025-02-25 18:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 18:55:46] ANSI_COLOR="0;31"
[2025-02-25 18:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 18:55:46] HOME_URL="https://www.centos.org/"
[2025-02-25 18:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 18:55:46] 
[2025-02-25 18:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 18:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 18:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 18:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 18:55:46] 
[2025-02-25 18:55:46] 2025-02-26 02:55:29,337 | INFO     | **************************************
[2025-02-25 18:55:46] 2025-02-26 02:55:29,839 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-02-25 18:55:46] 2025-02-26 02:55:29,849 | INFO     | sufficient remaining disk space (1836213862400 B)
[2025-02-25 18:55:46] 2025-02-26 02:55:29,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 18:55:46] 2025-02-26 02:55:29,849 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 18:55:46] 2025-02-26 02:55:29,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:55:46] 2025-02-26 02:55:30,209 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-02-25 18:55:46] 2025-02-26 02:55:30,209 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-02-25 18:55:46] 2025-02-26 02:55:30,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:55:46] 2025-02-26 02:55:30,209 | INFO     | will abort loop
[2025-02-25 18:55:46] 2025-02-26 02:55:30,447 | INFO     | all data control threads have been joined
[2025-02-25 18:55:46] 2025-02-26 02:55:30,455 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 18:55:46] 2025-02-26 02:55:30,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 18:55:46] 2025-02-26 02:55:30,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 18:55:46] 2025-02-26 02:55:30,587 | INFO     | all job control threads have been joined
[2025-02-25 18:55:46] 2025-02-26 02:55:30,854 | INFO     | [job] retrieve thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:30,854 | INFO     | [job] queue monitor thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:30,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 18:55:46] 2025-02-26 02:55:31,010 | INFO     | all payload control threads have been joined
[2025-02-25 18:55:46] 2025-02-26 02:55:31,214 | INFO     | [job] job monitor thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:31,338 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:31,452 | INFO     | [data] control thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:31,593 | INFO     | [job] control thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:31,788 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:31,998 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:32,011 | INFO     | [job] validate thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:32,015 | INFO     | [payload] control thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:32,192 | INFO     | [payload] validate_post thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:32,276 | INFO     | [data] copytool_in thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:32,412 | INFO     | [payload] failed_post thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:32,889 | INFO     | [data] copytool_out thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:33,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 18:55:46] 2025-02-26 02:55:37,214 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:39,973 | INFO     | job.realtimelogging is not enabled
[2025-02-25 18:55:46] 2025-02-26 02:55:40,978 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 18:55:46] 2025-02-26 02:55:41,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139982770603840)>', '<ExcThread(monitor, started 139982094194432)>']
[2025-02-25 18:55:46] 2025-02-26 02:55:42,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 18:55:46] 2025-02-26 02:55:42,513 | INFO     | [monitor] control thread has ended
[2025-02-25 18:55:46] 2025-02-26 02:55:46,567 | INFO     | all workflow threads have been joined
[2025-02-25 18:55:46] 2025-02-26 02:55:46,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 18:55:46] 2025-02-26 02:55:46,567 | INFO     | traces error code: 0
[2025-02-25 18:55:46] 2025-02-26 02:55:46,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 18:55:46] 2025-02-26 02:55:46,667 [wrapper] ==== pilot stdout END ====
[2025-02-25 18:55:46] 2025-02-26 02:55:46,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 18:55:46] 2025-02-26 02:55:46,670 [wrapper] pilotpid: 3941253
[2025-02-25 18:55:46] 2025-02-26 02:55:46,673 [wrapper] Pilot exit status: 0
[2025-02-25 18:55:46] 2025-02-26 02:55:46,679 [wrapper] pandaids: 6531021757
[2025-02-25 18:55:46] 2025-02-26 02:55:46,723 [wrapper] cleanup supervisor_pilot 4072019 3941254
[2025-02-25 18:55:46] 2025-02-26 02:55:46,725 [wrapper] Test setup, not cleaning
[2025-02-25 18:55:46] 2025-02-26 02:55:46,729 [wrapper] apfmon messages muted
[2025-02-25 18:55:46] 2025-02-26 02:55:46,731 [wrapper] ==== wrapper stdout END ====
[2025-02-25 18:55:46] 2025-02-26 02:55:46,733 [wrapper] ==== wrapper stderr END ====
[2025-02-25 18:55:46]  *** Error codes and diagnostics ***
[2025-02-25 18:55:46]     "exeErrorCode": 0,
[2025-02-25 18:55:46]     "exeErrorDiag": "",
[2025-02-25 18:55:46]     "pilotErrorCode": 0,
[2025-02-25 18:55:46]     "pilotErrorDiag": "",
[2025-02-25 18:55:46]  *** Listing of results directory ***
[2025-02-25 18:55:46] total 433820
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc    491065 Feb 25 13:07 pilot3.tar.gz
[2025-02-25 18:55:46] -rwx------. 1 boinc boinc     35865 Feb 25 13:51 runpilot2-wrapper.sh
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc      5118 Feb 25 13:51 queuedata.json
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc       100 Feb 25 17:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 18:55:46] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 17:59 run_atlas
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc       105 Feb 25 17:59 job.xml
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc      6602 Feb 25 17:59 init_data.xml
[2025-02-25 18:55:46] -rw-r--r--. 2 boinc boinc 252146874 Feb 25 17:59 EVNT.43401153._000004.pool.root.1
[2025-02-25 18:55:46] drwxrwx--x. 2 boinc boinc      4096 Feb 25 17:59 shared
[2025-02-25 18:55:46] -rw-r--r--. 2 boinc boinc    503539 Feb 25 17:59 input.tar.gz
[2025-02-25 18:55:46] -rw-r--r--. 2 boinc boinc     17569 Feb 25 17:59 start_atlas.sh
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc         0 Feb 25 17:59 boinc_lockfile
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc      2534 Feb 25 17:59 pandaJob.out
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc       424 Feb 25 17:59 setup.sh.local
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc    987490 Feb 25 17:59 agis_schedconf.cvmfs.json
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc   1573632 Feb 25 17:59 agis_ddmendpoints.agis.ALL.json
[2025-02-25 18:55:46] drwx------. 4 boinc boinc      4096 Feb 25 17:59 pilot3
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc 186894272 Feb 25 18:54 HITS.43401155._000085.pool.root.1
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc       529 Feb 25 18:54 boinc_task_state.xml
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc      1037 Feb 25 18:55 memory_monitor_summary.json
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc    347883 Feb 25 18:55 log.43401155._000085.job.log.tgz.1
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc        95 Feb 25 18:55 pilot_heartbeat.json
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc      8192 Feb 25 18:55 boinc_mmap_file
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc        27 Feb 25 18:55 wrapper_checkpoint.txt
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc      7729 Feb 25 18:55 heartbeat.json
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc      4472 Feb 25 18:55 pilotlog.txt
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc    345896 Feb 25 18:55 log.43401155._000085.job.log.1
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc       357 Feb 25 18:55 output.list
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc       620 Feb 25 18:55 runtime_log
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc    716800 Feb 25 18:55 result.tar.gz
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc     11144 Feb 25 18:55 runtime_log.err
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc       658 Feb 25 18:55 021MDmL1H76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1AxKDmWF5vom.diag
[2025-02-25 18:55:46] -rw-r--r--. 1 boinc boinc     21931 Feb 25 18:55 stderr.txt
[2025-02-25 18:55:46] HITS file was successfully produced:
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc 186894272 Feb 25 18:54 shared/HITS.pool.root.1
[2025-02-25 18:55:46]  *** Contents of shared directory: ***
[2025-02-25 18:55:46] total 429976
[2025-02-25 18:55:46] -rw-r--r--. 2 boinc boinc 252146874 Feb 25 17:59 ATLAS.root_0
[2025-02-25 18:55:46] -rw-r--r--. 2 boinc boinc    503539 Feb 25 17:59 input.tar.gz
[2025-02-25 18:55:46] -rw-r--r--. 2 boinc boinc     17569 Feb 25 17:59 start_atlas.sh
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc 186894272 Feb 25 18:54 HITS.pool.root.1
[2025-02-25 18:55:46] -rw-------. 1 boinc boinc    716800 Feb 25 18:55 result.tar.gz
18:55:48 (3935841): run_atlas exited; CPU time 26607.774858
18:55:48 (3935841): called boinc_finish(0)

</stderr_txt>
]]>

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