Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:08:14 (2660129): wrapper (7.7.26015): starting
18:08:14 (2660129): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 18:08:14] Arguments: --nthreads 9
[2025-02-25 18:08:14] Threads: 9
[2025-02-25 18:08:14] Checking for CVMFS
[2025-02-25 18:08:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 18:08:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 18:08:14] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 18:08:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 18:08:14] 2.11.5.0 3813485 16682 248056 143055 1 113 23914879 37641216 15498 130560 0 188522 98.684 524008 25837 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 18:08:14] CVMFS is ok
[2025-02-25 18:08:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 18:08:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 18:08:14] Further information can be found at the LHC@home message board.
[2025-02-25 18:08:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 18:08:14] Checking for apptainer binary...
[2025-02-25 18:08:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 18:08:14] Running /usr/bin/apptainer --version
[2025-02-25 18:08:14] apptainer version 1.3.6-1.el9
[2025-02-25 18:08:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 18:08:15] c6-1-26-4.aglt2.org
[2025-02-25 18:08:15] apptainer works
[2025-02-25 18:08:15] Set ATHENA_PROC_NUMBER=9
[2025-02-25 18:08:15] Set ATHENA_CORE_NUMBER=9
[2025-02-25 18:08:15] Starting ATLAS job with PandaID=6531002333
[2025-02-25 18:08:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 19:39:22]  *** The last 200 lines of the pilot log: ***
[2025-02-25 19:39:22]  filetype=log
[2025-02-25 19:39:22]  guid=d2aca9f6-f519-4bd5-ab39-6ae92a9c0cd4
[2025-02-25 19:39:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 19:39:22]  is_altstaged=None
[2025-02-25 19:39:22]  is_tar=False
[2025-02-25 19:39:22]  lfn=log.43401171._001574.job.log.tgz.1
[2025-02-25 19:39:22]  mtime=0
[2025-02-25 19:39:22]  protocol_id=None
[2025-02-25 19:39:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 19:39:22]  replicas=None
[2025-02-25 19:39:22]  scope=mc23_13p6TeV
[2025-02-25 19:39:22]  status=None
[2025-02-25 19:39:22]  status_code=0
[2025-02-25 19:39:22]  storage_token=
[2025-02-25 19:39:22]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6531002333/log.43401171._001574.job.log.tgz.1
[2025-02-25 19:39:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/95/log.43401171._001574.job.log.tgz.1
[2025-02-25 19:39:22]  workdir=None
[2025-02-25 19:39:22] ]
[2025-02-25 19:39:22] 2025-02-26 00:39:02,918 | INFO     | transferring file log.43401171._001574.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6531002333/log.43401171._001574.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 19:39:22] 2025-02-26 00:39:02,919 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6531002333/log.43401171._001574.job.log.tgz.1 /tmp/boinchome/slots/2/log.43401171._001574.job
[2025-02-25 19:39:22] 2025-02-26 00:39:02,933 | INFO     | adding to output.list: log.43401171._001574.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/95/log.43401171._001574.job.log.tg
[2025-02-25 19:39:22] 2025-02-26 00:39:02,934 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 19:39:22] 2025-02-26 00:39:02,934 | INFO     | summary of transferred files:
[2025-02-25 19:39:22] 2025-02-26 00:39:02,934 | INFO     |  -- lfn=log.43401171._001574.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 19:39:22] 2025-02-26 00:39:02,934 | INFO     | stage-out finished correctly
[2025-02-25 19:39:22] 2025-02-26 00:39:02,982 | INFO     | monitor loop #404: job 0:6531002333 is in state 'finished'
[2025-02-25 19:39:22] 2025-02-26 00:39:02,998 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 19:39:22] 2025-02-26 00:39:04,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 19:39:22] 2025-02-26 00:39:05,010 | INFO     | job 6531002333 has state=finished
[2025-02-25 19:39:22] 2025-02-26 00:39:05,010 | INFO     | preparing for final server update for job 6531002333 in state='finished'
[2025-02-25 19:39:22] 2025-02-26 00:39:05,011 | INFO     | this job has now completed (state=finished)
[2025-02-25 19:39:22] 2025-02-26 00:39:05,011 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 19:39:22] 2025-02-26 00:39:05,011 | INFO     | log transfer has been attempted: DONE
[2025-02-25 19:39:22] 2025-02-26 00:39:05,011 | INFO     | job 6531002333 has finished - writing final server update
[2025-02-25 19:39:22] 2025-02-26 00:39:05,011 | INFO     | total number of processed events: 400 (read)
[2025-02-25 19:39:22] 2025-02-26 00:39:05,028 | INFO     | executing command: lscpu
[2025-02-25 19:39:22] 2025-02-26 00:39:05,083 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 19:39:22] 2025-02-26 00:39:05,104 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 19:39:22] 2025-02-26 00:39:05,506 | INFO     | monitor loop #405: job 0:6531002333 is in state 'finished'
[2025-02-25 19:39:22] 2025-02-26 00:39:05,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 19:39:22] 2025-02-26 00:39:08,009 | INFO     | monitor loop #406: job 0:6531002333 is in state 'finished'
[2025-02-25 19:39:22] 2025-02-26 00:39:08,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-25 19:39:22] 2025-02-26 00:39:09,503 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 19:39:22] 2025-02-26 00:39:09,503 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6531002333/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 19:39:22] 2025-02-26 00:39:09,504 | INFO     | extracted standard info from prmon json
[2025-02-25 19:39:22] 2025-02-26 00:39:09,504 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 19:39:22] 2025-02-26 00:39:09,504 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 19:39:22] 2025-02-26 00:39:09,505 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 19:39:22] 2025-02-26 00:39:09,505 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 19:39:22] 2025-02-26 00:39:09,507 | INFO     | fitting pss+swap vs Time
[2025-02-25 19:39:22] 2025-02-26 00:39:09,507 | INFO     | model: linear, x: [1740525248.0, 1740525309.0, 1740525370.0, 1740525431.0, 1740525492.0, 1740525553.0, 1740525614.0, 1740525675.0, 1740525736.0, 1740525797.0, 1740
[2025-02-25 19:39:22] 2025-02-26 00:39:09,507 | INFO     | sum of square deviations: 170949542.4878044
[2025-02-25 19:39:22] 2025-02-26 00:39:09,508 | INFO     | sum of deviations: 24355777626.365856
[2025-02-25 19:39:22] 2025-02-26 00:39:09,508 | INFO     | mean x: 1740527718.512195
[2025-02-25 19:39:22] 2025-02-26 00:39:09,508 | INFO     | mean y: 2147041.6341463416
[2025-02-25 19:39:22] 2025-02-26 00:39:09,508 | INFO     | -- intersect: -247976908343.2797
[2025-02-25 19:39:22] 2025-02-26 00:39:09,508 | INFO     | intersect: -247976908343.2797
[2025-02-25 19:39:22] 2025-02-26 00:39:09,508 | INFO     | chi2: 2.522792342285446
[2025-02-25 19:39:22] 2025-02-26 00:39:09,508 | INFO     | -- intersect: -247976908343.2797
[2025-02-25 19:39:22] 2025-02-26 00:39:09,508 | INFO     | current memory leak: 142.47 B/s (using 82 data points, chi2=2.52)
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | ..............................
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | . Timing measurements:
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | . get job = 0 s
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | . initial setup = 3 s
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | . payload setup = 8 s
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | . stage-in = 0 s
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | . payload execution = 5404 s
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | . stage-out = 0 s
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | . log creation = 0 s
[2025-02-25 19:39:22] 2025-02-26 00:39:09,509 | INFO     | ..............................
[2025-02-25 19:39:22] 2025-02-26 00:39:09,592 | INFO     | 
[2025-02-25 19:39:22] 2025-02-26 00:39:09,592 | INFO     | job summary report
[2025-02-25 19:39:22] 2025-02-26 00:39:09,592 | INFO     | --------------------------------------------------
[2025-02-25 19:39:22] 2025-02-26 00:39:09,592 | INFO     | PanDA job id: 6531002333
[2025-02-25 19:39:22] 2025-02-26 00:39:09,592 | INFO     | task id: 43401171
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | errors: (none)
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | pilot state: finished 
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | transexitcode: 0
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | exeerrorcode: 0
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | exeerrordiag: 
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | exitcode: 0
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | exitmsg: OK
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | cpuconsumptiontime: 38011 s
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | nevents: 400
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | neventsw: 0
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | pid: 2673838
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | pgrp: 2673838
[2025-02-25 19:39:22] 2025-02-26 00:39:09,593 | INFO     | corecount: 9
[2025-02-25 19:39:22] 2025-02-26 00:39:09,594 | INFO     | event service: False
[2025-02-25 19:39:22] 2025-02-26 00:39:09,594 | INFO     | sizes: {0: 2370385, 6: 2370591, 11: 2370619, 5416: 2397109, 5418: 2406050, 5420: 2406106, 5425: 2406404}
[2025-02-25 19:39:22] 2025-02-26 00:39:09,594 | INFO     | --------------------------------------------------
[2025-02-25 19:39:22] 2025-02-26 00:39:09,594 | INFO     | 
[2025-02-25 19:39:22] 2025-02-26 00:39:09,594 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-02-25 19:39:22] 2025-02-26 00:39:09,612 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | job 6531002333 has completed (purged errors)
[2025-02-25 19:39:22] 2025-02-26 00:39:09,614 | INFO     | overall cleanup function is called
[2025-02-25 19:39:22] 2025-02-26 00:39:10,623 | INFO     | --- collectZombieJob: --- 10, [2673838]
[2025-02-25 19:39:22] 2025-02-26 00:39:10,623 | INFO     | zombie collector waiting for pid 2673838
[2025-02-25 19:39:22] 2025-02-26 00:39:10,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 19:39:22] 2025-02-26 00:39:10,623 | INFO     | collected zombie processes
[2025-02-25 19:39:22] 2025-02-26 00:39:10,624 | INFO     | will attempt to kill all subprocesses of pid=2673838
[2025-02-25 19:39:22] 2025-02-26 00:39:10,791 | INFO     | process IDs to be killed: [2673838] (in reverse order)
[2025-02-25 19:39:22] 2025-02-26 00:39:10,898 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 19:39:22] 2025-02-26 00:39:10,899 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 19:39:22] 2025-02-26 00:39:10,914 | INFO     | did not find any defunct processes belonging to 2673838
[2025-02-25 19:39:22] 2025-02-26 00:39:10,927 | INFO     | did not find any defunct processes belonging to 2673838
[2025-02-25 19:39:22] 2025-02-26 00:39:10,927 | INFO     | ready for new job
[2025-02-25 19:39:22] 2025-02-26 00:39:10,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 19:39:22] 2025-02-26 00:39:10,929 | INFO     | **************************************
[2025-02-25 19:39:22] 2025-02-26 00:39:10,930 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 19:39:22] 2025-02-26 00:39:10,930 | INFO     | **************************************
[2025-02-25 19:39:22] 2025-02-26 00:39:10,930 | INFO     | 
[2025-02-25 19:39:22] 2025-02-26 00:39:10,945 | INFO     | architecture information:
[2025-02-25 19:39:22] 2025-02-26 00:39:10,946 | INFO     | executing command: cat /etc/os-release
[2025-02-25 19:39:22] 2025-02-26 00:39:10,963 | INFO     | cat /etc/os-release:
[2025-02-25 19:39:22] NAME="CentOS Linux"
[2025-02-25 19:39:22] VERSION="7 (Core)"
[2025-02-25 19:39:22] ID="centos"
[2025-02-25 19:39:22] ID_LIKE="rhel fedora"
[2025-02-25 19:39:22] VERSION_ID="7"
[2025-02-25 19:39:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 19:39:22] ANSI_COLOR="0;31"
[2025-02-25 19:39:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 19:39:22] HOME_URL="https://www.centos.org/"
[2025-02-25 19:39:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 19:39:22] 
[2025-02-25 19:39:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 19:39:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 19:39:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 19:39:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 19:39:22] 
[2025-02-25 19:39:22] 2025-02-26 00:39:10,963 | INFO     | **************************************
[2025-02-25 19:39:22] 2025-02-26 00:39:11,465 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-02-25 19:39:22] 2025-02-26 00:39:11,483 | INFO     | sufficient remaining disk space (63341330432 B)
[2025-02-25 19:39:22] 2025-02-26 00:39:11,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 19:39:22] 2025-02-26 00:39:11,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 19:39:22] 2025-02-26 00:39:11,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 19:39:22] 2025-02-26 00:39:11,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 19:39:22] 2025-02-26 00:39:11,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 19:39:22] 2025-02-26 00:39:11,518 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 19:39:22] 2025-02-26 00:39:11,518 | INFO     | aborting loop
[2025-02-25 19:39:22] 2025-02-26 00:39:12,338 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 19:39:22] 2025-02-26 00:39:12,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 19:39:22] 2025-02-26 00:39:12,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 19:39:22] 2025-02-26 00:39:12,424 | INFO     | all data control threads have been joined
[2025-02-25 19:39:22] 2025-02-26 00:39:12,480 | INFO     | all payload control threads have been joined
[2025-02-25 19:39:22] 2025-02-26 00:39:12,489 | INFO     | [job] retrieve thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:12,490 | INFO     | [job] queue monitor thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:12,512 | INFO     | [data] copytool_in thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:12,523 | INFO     | [job] job monitor thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:12,615 | INFO     | [job] validate thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:12,651 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:12,809 | INFO     | all job control threads have been joined
[2025-02-25 19:39:22] 2025-02-26 00:39:12,989 | INFO     | [payload] validate_post thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:13,104 | INFO     | [payload] failed_post thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:13,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:13,430 | INFO     | [data] control thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:13,485 | INFO     | [payload] control thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:13,490 | INFO     | [data] copytool_out thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:13,505 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:13,619 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:13,814 | INFO     | [job] control thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:15,492 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 19:39:22] 2025-02-26 00:39:16,999 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639713642304)>', '<ExcThread(monitor, started 139639209830144)>']
[2025-02-25 19:39:22] 2025-02-26 00:39:17,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 19:39:22] 2025-02-26 00:39:17,365 | INFO     | [monitor] control thread has ended
[2025-02-25 19:39:22] 2025-02-26 00:39:22,024 | INFO     | all workflow threads have been joined
[2025-02-25 19:39:22] 2025-02-26 00:39:22,024 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 19:39:22] 2025-02-26 00:39:22,025 | INFO     | traces error code: 0
[2025-02-25 19:39:22] 2025-02-26 00:39:22,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 19:39:22] 2025-02-26 00:39:22,260 [wrapper] ==== pilot stdout END ====
[2025-02-25 19:39:22] 2025-02-26 00:39:22,263 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 19:39:22] 2025-02-26 00:39:22,266 [wrapper] pilotpid: 2664626
[2025-02-25 19:39:22] 2025-02-26 00:39:22,269 [wrapper] Pilot exit status: 0
[2025-02-25 19:39:22] 2025-02-26 00:39:22,280 [wrapper] pandaids: 6531002333
[2025-02-25 19:39:22] 2025-02-26 00:39:22,346 [wrapper] cleanup supervisor_pilot 3389910 2664627
[2025-02-25 19:39:22] 2025-02-26 00:39:22,349 [wrapper] Test setup, not cleaning
[2025-02-25 19:39:22] 2025-02-26 00:39:22,355 [wrapper] apfmon messages muted
[2025-02-25 19:39:22] 2025-02-26 00:39:22,359 [wrapper] ==== wrapper stdout END ====
[2025-02-25 19:39:22] 2025-02-26 00:39:22,361 [wrapper] ==== wrapper stderr END ====
[2025-02-25 19:39:22]  *** Error codes and diagnostics ***
[2025-02-25 19:39:22]     "exeErrorCode": 0,
[2025-02-25 19:39:22]     "exeErrorDiag": "",
[2025-02-25 19:39:22]     "pilotErrorCode": 0,
[2025-02-25 19:39:22]     "pilotErrorDiag": "",
[2025-02-25 19:39:22]  *** Listing of results directory ***
[2025-02-25 19:39:22] total 437740
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 16:07 pilot3.tar.gz
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 16:38 queuedata.json
[2025-02-25 19:39:22] -rwx------. 1 boincer umatlas     35865 Feb 25 16:38 runpilot2-wrapper.sh
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas       100 Feb 25 18:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 19:39:22] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 18:08 run_atlas
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas       105 Feb 25 18:08 job.xml
[2025-02-25 19:39:22] -rw-r--r--. 2 boincer umatlas 250464502 Feb 25 18:08 EVNT.43401169._000063.pool.root.1
[2025-02-25 19:39:22] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 18:08 start_atlas.sh
[2025-02-25 19:39:22] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 18:08 shared
[2025-02-25 19:39:22] -rw-r--r--. 2 boincer umatlas    503556 Feb 25 18:08 input.tar.gz
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas         0 Feb 25 18:08 boinc_lockfile
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas      2543 Feb 25 18:08 pandaJob.out
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas       467 Feb 25 18:08 setup.sh.local
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas    987490 Feb 25 18:08 agis_schedconf.cvmfs.json
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas   1573632 Feb 25 18:08 agis_ddmendpoints.agis.ALL.json
[2025-02-25 19:39:22] drwx------. 4 boincer umatlas      4096 Feb 25 18:08 pilot3
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas      6841 Feb 25 19:36 init_data.xml
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas        95 Feb 25 19:38 pilot_heartbeat.json
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas 192270018 Feb 25 19:38 HITS.43401171._001574.pool.root.1
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas       529 Feb 25 19:38 boinc_task_state.xml
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas      1035 Feb 25 19:38 memory_monitor_summary.json
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas    323490 Feb 25 19:39 log.43401171._001574.job.log.tgz.1
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas      7730 Feb 25 19:39 heartbeat.json
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas        27 Feb 25 19:39 wrapper_checkpoint.txt
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 19:39 boinc_mmap_file
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas      4215 Feb 25 19:39 pilotlog.txt
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas    535061 Feb 25 19:39 log.43401171._001574.job.log.1
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas       357 Feb 25 19:39 output.list
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas       620 Feb 25 19:39 runtime_log
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas    880640 Feb 25 19:39 result.tar.gz
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas       653 Feb 25 19:39 ZizLDmToH76n9Rq4apOajLDm4fhM0noT9bVoFjIUDm2HgKDmgZ7den.diag
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas     11423 Feb 25 19:39 runtime_log.err
[2025-02-25 19:39:22] -rw-r--r--. 1 boincer umatlas     21383 Feb 25 19:39 stderr.txt
[2025-02-25 19:39:22] HITS file was successfully produced:
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas 192270018 Feb 25 19:38 shared/HITS.pool.root.1
[2025-02-25 19:39:22]  *** Contents of shared directory: ***
[2025-02-25 19:39:22] total 433736
[2025-02-25 19:39:22] -rw-r--r--. 2 boincer umatlas 250464502 Feb 25 18:08 ATLAS.root_0
[2025-02-25 19:39:22] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 18:08 start_atlas.sh
[2025-02-25 19:39:22] -rw-r--r--. 2 boincer umatlas    503556 Feb 25 18:08 input.tar.gz
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas 192270018 Feb 25 19:38 HITS.pool.root.1
[2025-02-25 19:39:22] -rw-------. 1 boincer umatlas    880640 Feb 25 19:39 result.tar.gz
19:39:23 (2660129): run_atlas exited; CPU time 37987.709248
19:39:23 (2660129): called boinc_finish(0)

</stderr_txt>
]]>

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