Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:44:08 (2181327): wrapper (7.7.26015): starting
17:44:08 (2181327): wrapper: running run_atlas (--nthreads 9)
[2025-02-25 17:44:08] Arguments: --nthreads 9
[2025-02-25 17:44:08] Threads: 9
[2025-02-25 17:44:08] Checking for CVMFS
[2025-02-25 17:44:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-25 17:44:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-25 17:44:08] Running cvmfs_config stat atlas.cern.ch
[2025-02-25 17:44:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-25 17:44:09] 2.11.5.0 3491167 16658 398284 143054 1 208 26715572 37641216 19749 130560 0 1820613 98.268 8133932 36397 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-02-25 17:44:09] CVMFS is ok
[2025-02-25 17:44:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-25 17:44:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-25 17:44:09] Further information can be found at the LHC@home message board.
[2025-02-25 17:44:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-25 17:44:09] Checking for apptainer binary...
[2025-02-25 17:44:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-25 17:44:09] Running /usr/bin/apptainer --version
[2025-02-25 17:44:09] apptainer version 1.3.6-1.el9
[2025-02-25 17:44:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-25 17:44:09] c6-5-7-3.aglt2.org
[2025-02-25 17:44:09] apptainer works
[2025-02-25 17:44:09] Set ATHENA_PROC_NUMBER=9
[2025-02-25 17:44:09] Set ATHENA_CORE_NUMBER=9
[2025-02-25 17:44:09] Starting ATLAS job with PandaID=6531002284
[2025-02-25 17:44:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-25 18:59:50]  *** The last 200 lines of the pilot log: ***
[2025-02-25 18:59:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-25 18:59:50]  is_altstaged=None
[2025-02-25 18:59:50]  is_tar=False
[2025-02-25 18:59:50]  lfn=log.43401171._001525.job.log.tgz.1
[2025-02-25 18:59:50]  mtime=0
[2025-02-25 18:59:50]  protocol_id=None
[2025-02-25 18:59:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-25 18:59:50]  replicas=None
[2025-02-25 18:59:50]  scope=mc23_13p6TeV
[2025-02-25 18:59:50]  status=None
[2025-02-25 18:59:50]  status_code=0
[2025-02-25 18:59:50]  storage_token=
[2025-02-25 18:59:50]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6531002284/log.43401171._001525.job.log.tgz.1
[2025-02-25 18:59:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/a6/log.43401171._001525.job.log.tgz.1
[2025-02-25 18:59:50]  workdir=None
[2025-02-25 18:59:50] ]
[2025-02-25 18:59:50] 2025-02-25 23:59:26,251 | INFO     | transferring file log.43401171._001525.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6531002284/log.43401171._001525.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-02-25 18:59:50] 2025-02-25 23:59:26,251 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6531002284/log.43401171._001525.job.log.tgz.1 /tmp/boinchome/slots/1/log.43401171._001525.job
[2025-02-25 18:59:50] 2025-02-25 23:59:26,268 | INFO     | adding to output.list: log.43401171._001525.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/a6/log.43401171._001525.job.log.tg
[2025-02-25 18:59:50] 2025-02-25 23:59:26,269 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-25 18:59:50] 2025-02-25 23:59:26,269 | INFO     | summary of transferred files:
[2025-02-25 18:59:50] 2025-02-25 23:59:26,270 | INFO     |  -- lfn=log.43401171._001525.job.log.tgz.1, status_code=0, status=transferred
[2025-02-25 18:59:50] 2025-02-25 23:59:26,270 | INFO     | stage-out finished correctly
[2025-02-25 18:59:50] 2025-02-25 23:59:26,348 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-25 18:59:50] 2025-02-25 23:59:26,433 | INFO     | job 6531002284 has state=finished
[2025-02-25 18:59:50] 2025-02-25 23:59:26,433 | INFO     | preparing for final server update for job 6531002284 in state='finished'
[2025-02-25 18:59:50] 2025-02-25 23:59:26,434 | INFO     | this job has now completed (state=finished)
[2025-02-25 18:59:50] 2025-02-25 23:59:26,434 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-25 18:59:50] 2025-02-25 23:59:26,434 | INFO     | log transfer has been attempted: DONE
[2025-02-25 18:59:50] 2025-02-25 23:59:26,434 | INFO     | job 6531002284 has finished - writing final server update
[2025-02-25 18:59:50] 2025-02-25 23:59:26,435 | INFO     | total number of processed events: 400 (read)
[2025-02-25 18:59:50] 2025-02-25 23:59:26,450 | INFO     | executing command: lscpu
[2025-02-25 18:59:50] 2025-02-25 23:59:26,506 | INFO     | found 28 cores (14 cores per socket, 2 sockets)
[2025-02-25 18:59:50] 2025-02-25 23:59:26,538 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-25 18:59:50] 2025-02-25 23:59:26,554 | INFO     | PID=2184991 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-25 18:59:50] 2025-02-25 23:59:26,555 | INFO     | .. there are 34 such processes running
[2025-02-25 18:59:50] 2025-02-25 23:59:30,175 | INFO     | CPU arch script returned: x86-64-v4
[2025-02-25 18:59:50] 2025-02-25 23:59:30,181 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6531002284/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 18:59:50] 2025-02-25 23:59:30,183 | INFO     | extracted standard info from prmon json
[2025-02-25 18:59:50] 2025-02-25 23:59:30,183 | INFO     | extracted standard memory fields from prmon json
[2025-02-25 18:59:50] 2025-02-25 23:59:30,183 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-25 18:59:50] 2025-02-25 23:59:30,184 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-25 18:59:50] 2025-02-25 23:59:30,184 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-25 18:59:50] 2025-02-25 23:59:30,186 | INFO     | fitting pss+swap vs Time
[2025-02-25 18:59:50] 2025-02-25 23:59:30,187 | INFO     | model: linear, x: [1740523788.0, 1740523849.0, 1740523910.0, 1740523971.0, 1740524032.0, 1740524093.0, 1740524154.0, 1740524215.0, 1740524276.0, 1740524337.0, 1740
[2025-02-25 18:59:50] 2025-02-25 23:59:30,187 | INFO     | sum of square deviations: 93240818.0
[2025-02-25 18:59:50] 2025-02-25 23:59:30,187 | INFO     | sum of deviations: 11163573095.0
[2025-02-25 18:59:50] 2025-02-25 23:59:30,187 | INFO     | mean x: 1740525801.0
[2025-02-25 18:59:50] 2025-02-25 23:59:30,187 | INFO     | mean y: 2195493.0597014925
[2025-02-25 18:59:50] 2025-02-25 23:59:30,188 | INFO     | -- intersect: -208388157787.59177
[2025-02-25 18:59:50] 2025-02-25 23:59:30,188 | INFO     | intersect: -208388157787.59177
[2025-02-25 18:59:50] 2025-02-25 23:59:30,188 | INFO     | chi2: 1.5038752120480385
[2025-02-25 18:59:50] 2025-02-25 23:59:30,188 | INFO     | -- intersect: -208388157787.59177
[2025-02-25 18:59:50] 2025-02-25 23:59:30,188 | INFO     | current memory leak: 119.73 B/s (using 67 data points, chi2=1.50)
[2025-02-25 18:59:50] 2025-02-25 23:59:30,188 | INFO     | ..............................
[2025-02-25 18:59:50] 2025-02-25 23:59:30,188 | INFO     | . Timing measurements:
[2025-02-25 18:59:50] 2025-02-25 23:59:30,189 | INFO     | . get job = 0 s
[2025-02-25 18:59:50] 2025-02-25 23:59:30,189 | INFO     | . initial setup = 2 s
[2025-02-25 18:59:50] 2025-02-25 23:59:30,189 | INFO     | . payload setup = 4 s
[2025-02-25 18:59:50] 2025-02-25 23:59:30,189 | INFO     | . stage-in = 0 s
[2025-02-25 18:59:50] 2025-02-25 23:59:30,189 | INFO     | . payload execution = 4482 s
[2025-02-25 18:59:50] 2025-02-25 23:59:30,189 | INFO     | . stage-out = 1 s
[2025-02-25 18:59:50] 2025-02-25 23:59:30,189 | INFO     | . log creation = 0 s
[2025-02-25 18:59:50] 2025-02-25 23:59:30,189 | INFO     | ..............................
[2025-02-25 18:59:50] 2025-02-25 23:59:30,426 | WARNING  | process 2192512 can no longer be monitored (due to stat problems) - aborting
[2025-02-25 18:59:50] 2025-02-25 23:59:30,426 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6531002284/memory_monitor_summary.json (trf name=prmon)
[2025-02-25 18:59:50] 2025-02-25 23:59:30,540 | INFO     | 
[2025-02-25 18:59:50] 2025-02-25 23:59:30,540 | INFO     | job summary report
[2025-02-25 18:59:50] 2025-02-25 23:59:30,540 | INFO     | --------------------------------------------------
[2025-02-25 18:59:50] 2025-02-25 23:59:30,540 | INFO     | PanDA job id: 6531002284
[2025-02-25 18:59:50] 2025-02-25 23:59:30,540 | INFO     | task id: 43401171
[2025-02-25 18:59:50] 2025-02-25 23:59:30,540 | INFO     | errors: (none)
[2025-02-25 18:59:50] 2025-02-25 23:59:30,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | pilot state: finished 
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | transexitcode: 0
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | exeerrorcode: 0
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | exeerrordiag: 
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | exitcode: 0
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | exitmsg: OK
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | cpuconsumptiontime: 32193 s
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | nevents: 400
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | neventsw: 0
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | pid: 2192512
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | pgrp: 2192512
[2025-02-25 18:59:50] 2025-02-25 23:59:30,541 | INFO     | corecount: 9
[2025-02-25 18:59:50] 2025-02-25 23:59:30,542 | INFO     | event service: False
[2025-02-25 18:59:50] 2025-02-25 23:59:30,542 | INFO     | sizes: {0: 2370214, 1: 2370413, 5: 2370619, 11: 2370675, 4491: 2396760, 4492: 2405885, 4496: 2405999}
[2025-02-25 18:59:50] 2025-02-25 23:59:30,542 | INFO     | --------------------------------------------------
[2025-02-25 18:59:50] 2025-02-25 23:59:30,542 | INFO     | 
[2025-02-25 18:59:50] 2025-02-25 23:59:30,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-02-25 18:59:50] 2025-02-25 23:59:30,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,563 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,563 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,563 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-25 18:59:50] 2025-02-25 23:59:30,564 | INFO     | job 6531002284 has completed (purged errors)
[2025-02-25 18:59:50] 2025-02-25 23:59:30,565 | INFO     | overall cleanup function is called
[2025-02-25 18:59:50] 2025-02-25 23:59:30,612 | INFO     | number of running child processes to parent process 2192512: 1
[2025-02-25 18:59:50] 2025-02-25 23:59:30,613 | INFO     | maximum number of monitored processes: 6
[2025-02-25 18:59:50] 2025-02-25 23:59:30,613 | INFO     | aborting job monitoring since job object (job id=6531002284) has expired
[2025-02-25 18:59:50] 2025-02-25 23:59:31,572 | INFO     | --- collectZombieJob: --- 10, [2192512]
[2025-02-25 18:59:50] 2025-02-25 23:59:31,573 | INFO     | zombie collector waiting for pid 2192512
[2025-02-25 18:59:50] 2025-02-25 23:59:31,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-25 18:59:50] 2025-02-25 23:59:31,573 | INFO     | collected zombie processes
[2025-02-25 18:59:50] 2025-02-25 23:59:31,573 | INFO     | will attempt to kill all subprocesses of pid=2192512
[2025-02-25 18:59:50] 2025-02-25 23:59:31,814 | INFO     | process IDs to be killed: [2192512] (in reverse order)
[2025-02-25 18:59:50] 2025-02-25 23:59:31,937 | WARNING  | found no corresponding commands to process id(s)
[2025-02-25 18:59:50] 2025-02-25 23:59:31,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-25 18:59:50] 2025-02-25 23:59:31,952 | INFO     | did not find any defunct processes belonging to 2192512
[2025-02-25 18:59:50] 2025-02-25 23:59:31,966 | INFO     | did not find any defunct processes belonging to 2192512
[2025-02-25 18:59:50] 2025-02-25 23:59:31,967 | INFO     | ready for new job
[2025-02-25 18:59:50] 2025-02-25 23:59:31,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-25 18:59:50] 2025-02-25 23:59:31,968 | INFO     | **************************************
[2025-02-25 18:59:50] 2025-02-25 23:59:31,969 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-25 18:59:50] 2025-02-25 23:59:31,969 | INFO     | **************************************
[2025-02-25 18:59:50] 2025-02-25 23:59:31,969 | INFO     | 
[2025-02-25 18:59:50] 2025-02-25 23:59:31,983 | INFO     | architecture information:
[2025-02-25 18:59:50] 2025-02-25 23:59:31,984 | INFO     | executing command: cat /etc/os-release
[2025-02-25 18:59:50] 2025-02-25 23:59:31,999 | INFO     | cat /etc/os-release:
[2025-02-25 18:59:50] NAME="CentOS Linux"
[2025-02-25 18:59:50] VERSION="7 (Core)"
[2025-02-25 18:59:50] ID="centos"
[2025-02-25 18:59:50] ID_LIKE="rhel fedora"
[2025-02-25 18:59:50] VERSION_ID="7"
[2025-02-25 18:59:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-25 18:59:50] ANSI_COLOR="0;31"
[2025-02-25 18:59:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-25 18:59:50] HOME_URL="https://www.centos.org/"
[2025-02-25 18:59:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-25 18:59:50] 
[2025-02-25 18:59:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-25 18:59:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-25 18:59:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-25 18:59:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-25 18:59:50] 
[2025-02-25 18:59:50] 2025-02-25 23:59:31,999 | INFO     | **************************************
[2025-02-25 18:59:50] 2025-02-25 23:59:32,502 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-02-25 18:59:50] 2025-02-25 23:59:32,520 | INFO     | sufficient remaining disk space (73345794048 B)
[2025-02-25 18:59:50] 2025-02-25 23:59:32,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-25 18:59:50] 2025-02-25 23:59:32,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-25 18:59:50] 2025-02-25 23:59:32,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:59:50] 2025-02-25 23:59:32,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-25 18:59:50] 2025-02-25 23:59:32,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-25 18:59:50] 2025-02-25 23:59:32,521 | INFO     | aborting loop
[2025-02-25 18:59:50] 2025-02-25 23:59:32,571 | INFO     | found 0 job(s) in 20 queues
[2025-02-25 18:59:50] 2025-02-25 23:59:32,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-25 18:59:50] 2025-02-25 23:59:32,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-25 18:59:50] 2025-02-25 23:59:32,783 | INFO     | all data control threads have been joined
[2025-02-25 18:59:50] 2025-02-25 23:59:33,523 | INFO     | [job] retrieve thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:33,527 | INFO     | [job] job monitor thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:33,637 | INFO     | [job] create_data_payload thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:33,774 | INFO     | [payload] failed_post thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:33,787 | INFO     | [data] control thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:33,833 | INFO     | [job] validate thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:33,888 | INFO     | all payload control threads have been joined
[2025-02-25 18:59:50] 2025-02-25 23:59:34,135 | INFO     | [data] copytool_in thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:34,179 | INFO     | all job control threads have been joined
[2025-02-25 18:59:50] 2025-02-25 23:59:34,335 | INFO     | [payload] validate_post thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:34,527 | INFO     | [data] copytool_out thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:34,744 | INFO     | [payload] execute_payloads thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:34,894 | INFO     | [payload] control thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:35,000 | INFO     | [payload] validate_pre thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:35,183 | INFO     | [job] control thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:35,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-25 18:59:50] 2025-02-25 23:59:36,285 | INFO     | [job] queue monitor thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:36,527 | INFO     | [data] queue_monitor thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:42,922 | INFO     | job.realtimelogging is not enabled
[2025-02-25 18:59:50] 2025-02-25 23:59:43,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-25 18:59:50] 2025-02-25 23:59:45,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140452014884672)>', '<ExcThread(monitor, started 140451352909568)>']
[2025-02-25 18:59:50] 2025-02-25 23:59:45,636 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-25 18:59:50] 2025-02-25 23:59:45,637 | INFO     | [monitor] control thread has ended
[2025-02-25 18:59:50] 2025-02-25 23:59:50,038 | INFO     | all workflow threads have been joined
[2025-02-25 18:59:50] 2025-02-25 23:59:50,039 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-25 18:59:50] 2025-02-25 23:59:50,039 | INFO     | traces error code: 0
[2025-02-25 18:59:50] 2025-02-25 23:59:50,039 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-25 18:59:50] 2025-02-25 23:59:50,192 [wrapper] ==== pilot stdout END ====
[2025-02-25 18:59:50] 2025-02-25 23:59:50,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-25 18:59:50] 2025-02-25 23:59:50,197 [wrapper] pilotpid: 2184991
[2025-02-25 18:59:50] 2025-02-25 23:59:50,198 [wrapper] Pilot exit status: 0
[2025-02-25 18:59:50] 2025-02-25 23:59:50,206 [wrapper] pandaids: 6531002284
[2025-02-25 18:59:50] 2025-02-25 23:59:50,267 [wrapper] cleanup supervisor_pilot 2714698 2184992
[2025-02-25 18:59:50] 2025-02-25 23:59:50,269 [wrapper] Test setup, not cleaning
[2025-02-25 18:59:50] 2025-02-25 23:59:50,273 [wrapper] apfmon messages muted
[2025-02-25 18:59:50] 2025-02-25 23:59:50,276 [wrapper] ==== wrapper stdout END ====
[2025-02-25 18:59:50] 2025-02-25 23:59:50,278 [wrapper] ==== wrapper stderr END ====
[2025-02-25 18:59:50]  *** Error codes and diagnostics ***
[2025-02-25 18:59:50]     "exeErrorCode": 0,
[2025-02-25 18:59:50]     "exeErrorDiag": "",
[2025-02-25 18:59:50]     "pilotErrorCode": 0,
[2025-02-25 18:59:50]     "pilotErrorDiag": "",
[2025-02-25 18:59:50]  *** Listing of results directory ***
[2025-02-25 18:59:50] total 427108
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas    491065 Feb 25 16:07 pilot3.tar.gz
[2025-02-25 18:59:50] -rwx------. 1 boincer umatlas     35865 Feb 25 16:38 runpilot2-wrapper.sh
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas      5118 Feb 25 16:38 queuedata.json
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas       100 Feb 25 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-25 18:59:50] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 17:44 run_atlas
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas       105 Feb 25 17:44 job.xml
[2025-02-25 18:59:50] -rw-r--r--. 2 boincer umatlas 248300698 Feb 25 17:44 EVNT.43401169._000061.pool.root.1
[2025-02-25 18:59:50] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 17:44 start_atlas.sh
[2025-02-25 18:59:50] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 17:44 shared
[2025-02-25 18:59:50] -rw-r--r--. 2 boincer umatlas    503555 Feb 25 17:44 input.tar.gz
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas         0 Feb 25 17:44 boinc_lockfile
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas      2543 Feb 25 17:44 pandaJob.out
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas       467 Feb 25 17:44 setup.sh.local
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas    987490 Feb 25 17:44 agis_schedconf.cvmfs.json
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas   1573632 Feb 25 17:44 agis_ddmendpoints.agis.ALL.json
[2025-02-25 18:59:50] drwx------. 4 boincer umatlas      4096 Feb 25 17:44 pilot3
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas      6840 Feb 25 18:55 init_data.xml
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas 183718726 Feb 25 18:58 HITS.43401171._001525.pool.root.1
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas        95 Feb 25 18:58 pilot_heartbeat.json
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas       529 Feb 25 18:58 boinc_task_state.xml
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas      1038 Feb 25 18:59 memory_monitor_summary.json
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas    315467 Feb 25 18:59 log.43401171._001525.job.log.tgz.1
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas      7724 Feb 25 18:59 heartbeat.json
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas        27 Feb 25 18:59 wrapper_checkpoint.txt
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas      4287 Feb 25 18:59 pilotlog.txt
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas    451309 Feb 25 18:59 log.43401171._001525.job.log.1
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 18:59 boinc_mmap_file
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas       357 Feb 25 18:59 output.list
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas       620 Feb 25 18:59 runtime_log
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas    788480 Feb 25 18:59 result.tar.gz
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas     11418 Feb 25 18:59 runtime_log.err
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas       651 Feb 25 18:59 JcrLDmMoH76nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmc8wKDmGOBF9m.diag
[2025-02-25 18:59:50] -rw-r--r--. 1 boincer umatlas     21563 Feb 25 18:59 stderr.txt
[2025-02-25 18:59:50] HITS file was successfully produced:
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas 183718726 Feb 25 18:58 shared/HITS.pool.root.1
[2025-02-25 18:59:50]  *** Contents of shared directory: ***
[2025-02-25 18:59:50] total 423188
[2025-02-25 18:59:50] -rw-r--r--. 2 boincer umatlas 248300698 Feb 25 17:44 ATLAS.root_0
[2025-02-25 18:59:50] -rw-r--r--. 2 boincer umatlas     17569 Feb 25 17:44 start_atlas.sh
[2025-02-25 18:59:50] -rw-r--r--. 2 boincer umatlas    503555 Feb 25 17:44 input.tar.gz
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas 183718726 Feb 25 18:58 HITS.pool.root.1
[2025-02-25 18:59:50] -rw-------. 1 boincer umatlas    788480 Feb 25 18:59 result.tar.gz
18:59:51 (2181327): run_atlas exited; CPU time 32160.797832
18:59:51 (2181327): called boinc_finish(0)

</stderr_txt>
]]>

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