Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:53:00 (2296359): wrapper (7.7.26015): starting
12:53:00 (2296359): wrapper: running run_atlas (--nthreads 12)
[2025-02-26 12:53:00] Arguments: --nthreads 12
[2025-02-26 12:53:00] Threads: 12
[2025-02-26 12:53:00] Checking for CVMFS
[2025-02-26 12:53:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-02-26 12:53:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-02-26 12:53:00] Running cvmfs_config stat atlas.cern.ch
[2025-02-26 12:53:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-02-26 12:53:00] 2.12.6.0 4287 1611 78132 143073 0 187 40699350 46080001 921 130560 0 4640212 99.997 430047 14102 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-02-26 12:53:00] CVMFS is ok
[2025-02-26 12:53:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-02-26 12:53:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-02-26 12:53:00] Further information can be found at the LHC@home message board.
[2025-02-26 12:53:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-02-26 12:53:00] Checking for apptainer binary...
[2025-02-26 12:53:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-02-26 12:53:00] Running /usr/bin/apptainer --version
[2025-02-26 12:53:00] apptainer version 1.3.6-1.el9
[2025-02-26 12:53:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-02-26 12:53:00] gpu01.farm.particle.cz
[2025-02-26 12:53:00] apptainer works
[2025-02-26 12:53:00] Set ATHENA_PROC_NUMBER=12
[2025-02-26 12:53:00] Set ATHENA_CORE_NUMBER=12
[2025-02-26 12:53:01] Starting ATLAS job with PandaID=6531002303
[2025-02-26 12:53:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-02-26 13:38:59]  *** The last 200 lines of the pilot log: ***
[2025-02-26 13:38:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-02-26 13:38:59]  is_altstaged=None
[2025-02-26 13:38:59]  is_tar=False
[2025-02-26 13:38:59]  lfn=log.43401171._001544.job.log.tgz.1
[2025-02-26 13:38:59]  mtime=0
[2025-02-26 13:38:59]  protocol_id=None
[2025-02-26 13:38:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-02-26 13:38:59]  replicas=None
[2025-02-26 13:38:59]  scope=mc23_13p6TeV
[2025-02-26 13:38:59]  status=None
[2025-02-26 13:38:59]  status_code=0
[2025-02-26 13:38:59]  storage_token=
[2025-02-26 13:38:59]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6531002303/log.43401171._001544.job.log.tgz.1
[2025-02-26 13:38:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/f7/log.43401171._001544.job.log.tgz.1
[2025-02-26 13:38:59]  workdir=None
[2025-02-26 13:38:59] ]
[2025-02-26 13:38:59] 2025-02-26 12:38:35,442 | INFO     | transferring file log.43401171._001544.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6531002303/log.43401171._001544.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-02-26 13:38:59] 2025-02-26 12:38:35,442 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6531002303/log.43401171._001544.job.log.tgz.1 /var/lib/boinc/slots/2/log.43401171._001544.job
[2025-02-26 13:38:59] 2025-02-26 12:38:35,456 | INFO     | adding to output.list: log.43401171._001544.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/f7/log.43401171._001544.job.log.tg
[2025-02-26 13:38:59] 2025-02-26 12:38:35,456 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-02-26 13:38:59] 2025-02-26 12:38:35,456 | INFO     | summary of transferred files:
[2025-02-26 13:38:59] 2025-02-26 12:38:35,456 | INFO     |  -- lfn=log.43401171._001544.job.log.tgz.1, status_code=0, status=transferred
[2025-02-26 13:38:59] 2025-02-26 12:38:35,456 | INFO     | stage-out finished correctly
[2025-02-26 13:38:59] 2025-02-26 12:38:37,766 | INFO     | monitor loop #213: job 0:6531002303 is in state 'finished'
[2025-02-26 13:38:59] 2025-02-26 12:38:37,766 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 13:38:59] 2025-02-26 12:38:38,120 | INFO     | PID=2300177 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-02-26 13:38:59] 2025-02-26 12:38:38,120 | INFO     | .. there are 2 such processes running
[2025-02-26 13:38:59] 2025-02-26 12:38:38,621 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-02-26 13:38:59] 2025-02-26 12:38:38,697 | INFO     | job 6531002303 has state=finished
[2025-02-26 13:38:59] 2025-02-26 12:38:38,697 | INFO     | preparing for final server update for job 6531002303 in state='finished'
[2025-02-26 13:38:59] 2025-02-26 12:38:38,697 | INFO     | this job has now completed (state=finished)
[2025-02-26 13:38:59] 2025-02-26 12:38:38,697 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-02-26 13:38:59] 2025-02-26 12:38:38,697 | INFO     | log transfer has been attempted: DONE
[2025-02-26 13:38:59] 2025-02-26 12:38:38,697 | INFO     | job 6531002303 has finished - writing final server update
[2025-02-26 13:38:59] 2025-02-26 12:38:38,698 | INFO     | total number of processed events: 400 (read)
[2025-02-26 13:38:59] 2025-02-26 12:38:38,700 | INFO     | executing command: lscpu
[2025-02-26 13:38:59] 2025-02-26 12:38:38,723 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2025-02-26 13:38:59] 2025-02-26 12:38:38,734 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-02-26 13:38:59] 2025-02-26 12:38:40,269 | INFO     | monitor loop #214: job 0:6531002303 is in state 'finished'
[2025-02-26 13:38:59] 2025-02-26 12:38:40,269 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-02-26 13:38:59] 2025-02-26 12:38:41,308 | INFO     | CPU arch script returned: x86-64-v3
[2025-02-26 13:38:59] 2025-02-26 12:38:41,308 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6531002303/memory_monitor_summary.json (trf name=prmon)
[2025-02-26 13:38:59] 2025-02-26 12:38:41,309 | INFO     | extracted standard info from prmon json
[2025-02-26 13:38:59] 2025-02-26 12:38:41,309 | INFO     | extracted standard memory fields from prmon json
[2025-02-26 13:38:59] 2025-02-26 12:38:41,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-02-26 13:38:59] 2025-02-26 12:38:41,309 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-02-26 13:38:59] 2025-02-26 12:38:41,309 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-02-26 13:38:59] 2025-02-26 12:38:41,310 | INFO     | fitting pss+swap vs Time
[2025-02-26 13:38:59] 2025-02-26 12:38:41,310 | INFO     | model: linear, x: [1740571113.0, 1740571174.0, 1740571235.0, 1740571296.0, 1740571357.0, 1740571418.0, 1740571479.0, 1740571540.0, 1740571601.0, 1740571662.0, 1740
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | sum of square deviations: 17003109.5
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | sum of deviations: 8715783883.0
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | mean x: 1740572241.5
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | mean y: 2519802.263157895
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | -- intersect: -892213782731.2754
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | intersect: -892213782731.2754
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | chi2: 1.2530807476526615
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | -- intersect: -892213782731.2754
[2025-02-26 13:38:59] 2025-02-26 12:38:41,311 | INFO     | current memory leak: 512.60 B/s (using 38 data points, chi2=1.25)
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | ..............................
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | . Timing measurements:
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | . get job = 0 s
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | . initial setup = 1 s
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | . payload setup = 3 s
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | . stage-in = 0 s
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | . payload execution = 2706 s
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | . stage-out = 0 s
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | . log creation = 0 s
[2025-02-26 13:38:59] 2025-02-26 12:38:41,312 | INFO     | ..............................
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | 
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | job summary report
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | --------------------------------------------------
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | PanDA job id: 6531002303
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | task id: 43401171
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | errors: (none)
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | pilot state: finished 
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | transexitcode: 0
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | exeerrorcode: 0
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | exeerrordiag: 
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | exitcode: 0
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | exitmsg: OK
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | cpuconsumptiontime: 23706 s
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | nevents: 400
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | neventsw: 0
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | pid: 2306898
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | pgrp: 2306898
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | corecount: 12
[2025-02-26 13:38:59] 2025-02-26 12:38:41,368 | INFO     | event service: False
[2025-02-26 13:38:59] 2025-02-26 12:38:41,369 | INFO     | sizes: {0: 2363815, 3: 2364021, 11: 2364049, 2714: 2389352, 2715: 2398293, 2718: 2398349, 2720: 2398647}
[2025-02-26 13:38:59] 2025-02-26 12:38:41,369 | INFO     | --------------------------------------------------
[2025-02-26 13:38:59] 2025-02-26 12:38:41,369 | INFO     | 
[2025-02-26 13:38:59] 2025-02-26 12:38:41,369 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue jobs had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue payloads had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue data_in had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,381 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | queue messages had 0 job(s) [purged]
[2025-02-26 13:38:59] 2025-02-26 12:38:41,382 | INFO     | job 6531002303 has completed (purged errors)
[2025-02-26 13:38:59] 2025-02-26 12:38:41,383 | INFO     | overall cleanup function is called
[2025-02-26 13:38:59] 2025-02-26 12:38:42,390 | INFO     | --- collectZombieJob: --- 10, [2306898]
[2025-02-26 13:38:59] 2025-02-26 12:38:42,391 | INFO     | zombie collector waiting for pid 2306898
[2025-02-26 13:38:59] 2025-02-26 12:38:42,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-02-26 13:38:59] 2025-02-26 12:38:42,391 | INFO     | collected zombie processes
[2025-02-26 13:38:59] 2025-02-26 12:38:42,391 | INFO     | will attempt to kill all subprocesses of pid=2306898
[2025-02-26 13:38:59] 2025-02-26 12:38:42,441 | INFO     | process IDs to be killed: [2306898] (in reverse order)
[2025-02-26 13:38:59] 2025-02-26 12:38:42,479 | WARNING  | found no corresponding commands to process id(s)
[2025-02-26 13:38:59] 2025-02-26 12:38:42,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-02-26 13:38:59] 2025-02-26 12:38:42,483 | INFO     | did not find any defunct processes belonging to 2306898
[2025-02-26 13:38:59] 2025-02-26 12:38:42,486 | INFO     | did not find any defunct processes belonging to 2306898
[2025-02-26 13:38:59] 2025-02-26 12:38:42,486 | INFO     | ready for new job
[2025-02-26 13:38:59] 2025-02-26 12:38:42,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-02-26 13:38:59] 2025-02-26 12:38:42,487 | INFO     | **************************************
[2025-02-26 13:38:59] 2025-02-26 12:38:42,487 | INFO     | ***  PanDA Pilot version 3.9.4.15  ***
[2025-02-26 13:38:59] 2025-02-26 12:38:42,488 | INFO     | **************************************
[2025-02-26 13:38:59] 2025-02-26 12:38:42,488 | INFO     | 
[2025-02-26 13:38:59] 2025-02-26 12:38:42,489 | INFO     | architecture information:
[2025-02-26 13:38:59] 2025-02-26 12:38:42,490 | INFO     | executing command: cat /etc/os-release
[2025-02-26 13:38:59] 2025-02-26 12:38:42,499 | INFO     | cat /etc/os-release:
[2025-02-26 13:38:59] NAME="CentOS Linux"
[2025-02-26 13:38:59] VERSION="7 (Core)"
[2025-02-26 13:38:59] ID="centos"
[2025-02-26 13:38:59] ID_LIKE="rhel fedora"
[2025-02-26 13:38:59] VERSION_ID="7"
[2025-02-26 13:38:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-02-26 13:38:59] ANSI_COLOR="0;31"
[2025-02-26 13:38:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-02-26 13:38:59] HOME_URL="https://www.centos.org/"
[2025-02-26 13:38:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-02-26 13:38:59] 
[2025-02-26 13:38:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-02-26 13:38:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-02-26 13:38:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-02-26 13:38:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-02-26 13:38:59] 
[2025-02-26 13:38:59] 2025-02-26 12:38:42,499 | INFO     | **************************************
[2025-02-26 13:38:59] 2025-02-26 12:38:43,002 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-02-26 13:38:59] 2025-02-26 12:38:43,015 | INFO     | sufficient remaining disk space (77474037760 B)
[2025-02-26 13:38:59] 2025-02-26 12:38:43,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-02-26 13:38:59] 2025-02-26 12:38:43,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-02-26 13:38:59] 2025-02-26 12:38:43,015 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-02-26 13:38:59] 2025-02-26 12:38:43,015 | INFO     | found 0 job(s) in 20 queues
[2025-02-26 13:38:59] 2025-02-26 12:38:43,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-02-26 13:38:59] 2025-02-26 12:38:43,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-02-26 13:38:59] 2025-02-26 12:38:43,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-02-26 13:38:59] 2025-02-26 12:38:43,019 | INFO     | all data control threads have been joined
[2025-02-26 13:38:59] 2025-02-26 12:38:43,364 | INFO     | all payload control threads have been joined
[2025-02-26 13:38:59] 2025-02-26 12:38:43,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-02-26 13:38:59] 2025-02-26 12:38:43,570 | INFO     | all job control threads have been joined
[2025-02-26 13:38:59] 2025-02-26 12:38:43,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-02-26 13:38:59] 2025-02-26 12:38:43,778 | INFO     | aborting loop
[2025-02-26 13:38:59] 2025-02-26 12:38:44,020 | INFO     | [job] retrieve thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:44,021 | INFO     | [job] queue monitor thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:44,024 | INFO     | [data] control thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:44,030 | INFO     | [payload] validate_post thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:44,370 | INFO     | [payload] control thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:44,573 | INFO     | [job] control thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:44,702 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-02-26 13:38:59] 2025-02-26 12:38:44,750 | INFO     | [payload] failed_post thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:44,783 | INFO     | [job] job monitor thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:44,971 | INFO     | [payload] execute_payloads thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:45,178 | INFO     | [job] validate thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:45,185 | INFO     | [data] copytool_in thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:45,285 | INFO     | [job] create_data_payload thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:45,488 | INFO     | [payload] validate_pre thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:45,524 | INFO     | [data] copytool_out thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:48,708 | INFO     | [data] queue_monitor thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:53,309 | INFO     | job.realtimelogging is not enabled
[2025-02-26 13:38:59] 2025-02-26 12:38:54,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-02-26 13:38:59] 2025-02-26 12:38:54,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223093069632)>', '<ExcThread(monitor, started 140222612363008)>']
[2025-02-26 13:38:59] 2025-02-26 12:38:55,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-02-26 13:38:59] 2025-02-26 12:38:55,076 | INFO     | [monitor] control thread has ended
[2025-02-26 13:38:59] 2025-02-26 12:38:59,768 | INFO     | all workflow threads have been joined
[2025-02-26 13:38:59] 2025-02-26 12:38:59,768 | INFO     | end of generic workflow (traces error code: 0)
[2025-02-26 13:38:59] 2025-02-26 12:38:59,768 | INFO     | traces error code: 0
[2025-02-26 13:38:59] 2025-02-26 12:38:59,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-02-26 13:38:59] 2025-02-26 12:38:59,836 [wrapper] ==== pilot stdout END ====
[2025-02-26 13:38:59] 2025-02-26 12:38:59,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-02-26 13:38:59] 2025-02-26 12:38:59,840 [wrapper] pilotpid: 2300177
[2025-02-26 13:38:59] 2025-02-26 12:38:59,841 [wrapper] Pilot exit status: 0
[2025-02-26 13:38:59] 2025-02-26 12:38:59,849 [wrapper] pandaids: 6531002303
[2025-02-26 13:38:59] 2025-02-26 12:38:59,873 [wrapper] cleanup supervisor_pilot 2365167 2300178
[2025-02-26 13:38:59] 2025-02-26 12:38:59,875 [wrapper] Test setup, not cleaning
[2025-02-26 13:38:59] 2025-02-26 12:38:59,878 [wrapper] apfmon messages muted
[2025-02-26 13:38:59] 2025-02-26 12:38:59,880 [wrapper] ==== wrapper stdout END ====
[2025-02-26 13:38:59] 2025-02-26 12:38:59,881 [wrapper] ==== wrapper stderr END ====
[2025-02-26 13:38:59]  *** Error codes and diagnostics ***
[2025-02-26 13:38:59]     "exeErrorCode": 0,
[2025-02-26 13:38:59]     "exeErrorDiag": "",
[2025-02-26 13:38:59]     "pilotErrorCode": 0,
[2025-02-26 13:38:59]     "pilotErrorDiag": "",
[2025-02-26 13:38:59]  *** Listing of results directory ***
[2025-02-26 13:38:59] total 424796
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc    491065 Feb 25 22:07 pilot3.tar.gz
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc      5118 Feb 25 22:38 queuedata.json
[2025-02-26 13:38:59] -rwx------ 1 boinc boinc     35865 Feb 25 22:38 runpilot2-wrapper.sh
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc       100 Feb 26 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-02-26 13:38:59] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 12:53 run_atlas
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc       105 Feb 26 12:53 job.xml
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc      6657 Feb 26 12:53 init_data.xml
[2025-02-26 13:38:59] -rw-r--r-- 2 boinc boinc 248891281 Feb 26 12:53 EVNT.43401169._000062.pool.root.1
[2025-02-26 13:38:59] -rw-r--r-- 2 boinc boinc     17569 Feb 26 12:53 start_atlas.sh
[2025-02-26 13:38:59] drwxrwx--x 2 boinc boinc      4096 Feb 26 12:53 shared
[2025-02-26 13:38:59] -rw-r--r-- 2 boinc boinc    503559 Feb 26 12:53 input.tar.gz
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc         0 Feb 26 12:53 boinc_lockfile
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc      2542 Feb 26 12:53 pandaJob.out
[2025-02-26 13:38:59] -rw------- 1 boinc boinc       424 Feb 26 12:53 setup.sh.local
[2025-02-26 13:38:59] -rw------- 1 boinc boinc    990220 Feb 26 12:53 agis_schedconf.cvmfs.json
[2025-02-26 13:38:59] -rw------- 1 boinc boinc   1569202 Feb 26 12:53 agis_ddmendpoints.agis.ALL.json
[2025-02-26 13:38:59] drwx------ 4 boinc boinc      4096 Feb 26 12:53 pilot3
[2025-02-26 13:38:59] -rw------- 1 boinc boinc 181047209 Feb 26 13:38 HITS.43401171._001544.pool.root.1
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc       529 Feb 26 13:38 boinc_task_state.xml
[2025-02-26 13:38:59] -rw------- 1 boinc boinc        95 Feb 26 13:38 pilot_heartbeat.json
[2025-02-26 13:38:59] -rw------- 1 boinc boinc      1013 Feb 26 13:38 memory_monitor_summary.json
[2025-02-26 13:38:59] -rw------- 1 boinc boinc    332722 Feb 26 13:38 log.43401171._001544.job.log.tgz.1
[2025-02-26 13:38:59] -rw------- 1 boinc boinc      7673 Feb 26 13:38 heartbeat.json
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc      8192 Feb 26 13:38 boinc_mmap_file
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc        27 Feb 26 13:38 wrapper_checkpoint.txt
[2025-02-26 13:38:59] -rw------- 1 boinc boinc      4410 Feb 26 13:38 pilotlog.txt
[2025-02-26 13:38:59] -rw------- 1 boinc boinc    296503 Feb 26 13:38 log.43401171._001544.job.log.1
[2025-02-26 13:38:59] -rw------- 1 boinc boinc       357 Feb 26 13:38 output.list
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc       620 Feb 26 13:38 runtime_log
[2025-02-26 13:38:59] -rw------- 1 boinc boinc    645120 Feb 26 13:38 result.tar.gz
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc     11050 Feb 26 13:38 runtime_log.err
[2025-02-26 13:38:59] -rw------- 1 boinc boinc       657 Feb 26 13:38 5sOKDmToH76n9Rq4apOajLDm4fhM0noT9bVoFjIUDmmGgKDmcyPMvn.diag
[2025-02-26 13:38:59] -rw-r--r-- 1 boinc boinc     21575 Feb 26 13:38 stderr.txt
[2025-02-26 13:38:59] HITS file was successfully produced:
[2025-02-26 13:38:59] -rw------- 1 boinc boinc 181047209 Feb 26 13:38 shared/HITS.pool.root.1
[2025-02-26 13:38:59]  *** Contents of shared directory: ***
[2025-02-26 13:38:59] total 421016
[2025-02-26 13:38:59] -rw-r--r-- 2 boinc boinc 248891281 Feb 26 12:53 ATLAS.root_0
[2025-02-26 13:38:59] -rw-r--r-- 2 boinc boinc     17569 Feb 26 12:53 start_atlas.sh
[2025-02-26 13:38:59] -rw-r--r-- 2 boinc boinc    503559 Feb 26 12:53 input.tar.gz
[2025-02-26 13:38:59] -rw------- 1 boinc boinc 181047209 Feb 26 13:38 HITS.pool.root.1
[2025-02-26 13:38:59] -rw------- 1 boinc boinc    645120 Feb 26 13:38 result.tar.gz
13:39:01 (2296359): run_atlas exited; CPU time 23691.996524
13:39:01 (2296359): called boinc_finish(0)

</stderr_txt>
]]>

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